RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 MEGF6O75095 1541 aa18.18■□□□□ 0.5
SYNGAP1-224ENST00000637721 SHANK3Q9BYB0 1731 aa18.18■□□□□ 0.5
SYNGAP1-224ENST00000637721 CCER1Q8TC90 406 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-224ENST00000637721 PAPPAQ13219 1627 aa18.18■□□□□ 0.5
SYNGAP1-224ENST00000637721 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
SYNGAP1-224ENST00000637721 HSP90AB2PQ58FF8 381 aa18.17■□□□□ 0.5
SYNGAP1-224ENST00000637721 DOT1LQ8TEK3 1739 aa18.16■□□□□ 0.5
SYNGAP1-224ENST00000637721 ANKRD26Q9UPS8 1709 aa18.16■□□□□ 0.5
SYNGAP1-224ENST00000637721 HMGB2P26583 209 aaKnown RBP18.15■□□□□ 0.5
SYNGAP1-224ENST00000637721 MAP2P11137 1827 aaKnown RBP18.14■□□□□ 0.5
SYNGAP1-224ENST00000637721 DCAF8L1A6NGE4 600 aa18.14■□□□□ 0.49
SYNGAP1-224ENST00000637721 MTFR1LQ9H019 292 aa18.14■□□□□ 0.49
SYNGAP1-224ENST00000637721 PCDH11XQ9BZA7 1347 aa18.14■□□□□ 0.49
SYNGAP1-224ENST00000637721 PCDH11YQ9BZA8 1340 aa18.14■□□□□ 0.49
SYNGAP1-224ENST00000637721 QSER1Q2KHR3 1735 aa18.14■□□□□ 0.49
SYNGAP1-224ENST00000637721 LY75O60449 1722 aa18.13■□□□□ 0.49
SYNGAP1-224ENST00000637721 PRIM1P49642 420 aaKnown RBP18.13■□□□□ 0.49
SYNGAP1-224ENST00000637721 SYTL4Q96C24 671 aaPredicted RBP18.13■□□□□ 0.49
SYNGAP1-224ENST00000637721 WASHC2AQ641Q2 1341 aa18.13■□□□□ 0.49
SYNGAP1-224ENST00000637721 ZBTB7AO95365 584 aa18.12■□□□□ 0.49
SYNGAP1-224ENST00000637721 USHBP1Q8N6Y0 703 aa18.12■□□□□ 0.49
SYNGAP1-224ENST00000637721 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
SYNGAP1-224ENST00000637721 NCAPD2Q15021 1401 aa18.12■□□□□ 0.49
SYNGAP1-224ENST00000637721 UTRNP46939 3433 aa18.11■□□□□ 0.49
SYNGAP1-224ENST00000637721 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
SYNGAP1-224ENST00000637721 PDGFDQ9GZP0 370 aaPredicted RBP18.11■□□□□ 0.49
SYNGAP1-224ENST00000637721 LRRC4BQ9NT99 713 aa18.11■□□□□ 0.49
SYNGAP1-224ENST00000637721 NSD2O96028 1365 aa18.11■□□□□ 0.49
SYNGAP1-224ENST00000637721 PLEKHG2Q9H7P9 1386 aa18.1■□□□□ 0.49
SYNGAP1-224ENST00000637721 PTGER2P43116 358 aa18.1■□□□□ 0.49
SYNGAP1-224ENST00000637721 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
SYNGAP1-224ENST00000637721 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
SYNGAP1-224ENST00000637721 PKD1L3Q7Z443 1732 aa18.09■□□□□ 0.49
SYNGAP1-224ENST00000637721 AKT1S1Q96B36 256 aa18.09■□□□□ 0.49
SYNGAP1-224ENST00000637721 PPM1GO15355 546 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-224ENST00000637721 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
SYNGAP1-224ENST00000637721 ATF5Q9Y2D1 282 aaPredicted RBP18.08■□□□□ 0.48
SYNGAP1-224ENST00000637721 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.07■□□□□ 0.48
SYNGAP1-224ENST00000637721 POLKQ9UBT6 870 aa18.07■□□□□ 0.48
SYNGAP1-224ENST00000637721 SGIP1Q9BQI5 828 aa18.06■□□□□ 0.48
SYNGAP1-224ENST00000637721 PANK3Q9H999 370 aa18.06■□□□□ 0.48
SYNGAP1-224ENST00000637721 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
SYNGAP1-224ENST00000637721 CCNL1Q9UK58 526 aaPredicted RBP18.05■□□□□ 0.48
SYNGAP1-224ENST00000637721 CYP27B1O15528 508 aa18.04■□□□□ 0.48
SYNGAP1-224ENST00000637721 NKX1-1Q15270 411 aaPredicted RBP18.04■□□□□ 0.48
SYNGAP1-224ENST00000637721 EYA1Q99502 592 aa18.04■□□□□ 0.48
SYNGAP1-224ENST00000637721 TFCP2L1Q9NZI6 479 aa18.04■□□□□ 0.48
SYNGAP1-224ENST00000637721 MAP3K5Q99683 1374 aa18.04■□□□□ 0.48
SYNGAP1-224ENST00000637721 SMARCC1Q92922 1105 aaPredicted RBP18.03■□□□□ 0.48
SYNGAP1-224ENST00000637721 COL24A1Q17RW2 1714 aa18.03■□□□□ 0.48
SYNGAP1-224ENST00000637721 ITGB4P16144 1822 aa18.02■□□□□ 0.48
SYNGAP1-224ENST00000637721 ARXQ96QS3 562 aa18.02■□□□□ 0.48
SYNGAP1-224ENST00000637721 TUBGCP6Q96RT7 1819 aa18.02■□□□□ 0.47
SYNGAP1-224ENST00000637721 PNPLA7Q6ZV29 1317 aa18.01■□□□□ 0.47
SYNGAP1-224ENST00000637721 POLD1P28340 1107 aa18.01■□□□□ 0.47
SYNGAP1-224ENST00000637721 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
SYNGAP1-224ENST00000637721 SYT17Q9BSW7 474 aa18.01■□□□□ 0.47
SYNGAP1-224ENST00000637721 FHDC1Q9C0D6 1143 aaPredicted RBP18.01■□□□□ 0.47
SYNGAP1-224ENST00000637721 TOGARAM1Q9Y4F4 1720 aa18.01■□□□□ 0.47
SYNGAP1-224ENST00000637721 C5P01031 1676 aa18■□□□□ 0.47
SYNGAP1-224ENST00000637721 EIF4A2Q14240 407 aaKnown RBP18■□□□□ 0.47
SYNGAP1-224ENST00000637721 IFNL2Q8IZJ0 200 aa18■□□□□ 0.47
SYNGAP1-224ENST00000637721 KNSTRNQ9Y448 316 aa18■□□□□ 0.47
SYNGAP1-224ENST00000637721 PALLDQ8WX93 1383 aa18■□□□□ 0.47
SYNGAP1-224ENST00000637721 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
SYNGAP1-224ENST00000637721 FLAD1Q8NFF5 587 aa17.99■□□□□ 0.47
SYNGAP1-224ENST00000637721 TAF1LQ8IZX4 1826 aa17.98■□□□□ 0.47
SYNGAP1-224ENST00000637721 YY1P25490 414 aa17.98■□□□□ 0.47
SYNGAP1-224ENST00000637721 MORC1Q86VD1 984 aa17.98■□□□□ 0.47
SYNGAP1-224ENST00000637721 IGSF1Q8N6C5 1336 aa17.98■□□□□ 0.47
SYNGAP1-224ENST00000637721 GOLGB1Q14789 3259 aaKnown RBP17.97■□□□□ 0.47
SYNGAP1-224ENST00000637721 KCNQ4P56696 695 aa17.97■□□□□ 0.47
SYNGAP1-224ENST00000637721 PHKG2P15735 406 aa17.96■□□□□ 0.47
SYNGAP1-224ENST00000637721 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
SYNGAP1-224ENST00000637721 PIGBQ92521 554 aa17.95■□□□□ 0.46
SYNGAP1-224ENST00000637721 TMOD3Q9NYL9 352 aa17.95■□□□□ 0.46
SYNGAP1-224ENST00000637721 AMOTQ4VCS5 1084 aa17.94■□□□□ 0.46
SYNGAP1-224ENST00000637721 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
SYNGAP1-224ENST00000637721 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
SYNGAP1-224ENST00000637721 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
SYNGAP1-224ENST00000637721 COL23A1Q86Y22 540 aaPredicted RBP17.92■□□□□ 0.46
SYNGAP1-224ENST00000637721 KIF7Q2M1P5 1343 aa17.92■□□□□ 0.46
SYNGAP1-224ENST00000637721 MSH5O43196 834 aa17.91■□□□□ 0.46
SYNGAP1-224ENST00000637721 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
SYNGAP1-224ENST00000637721 AK7Q96M32 723 aa17.91■□□□□ 0.46
SYNGAP1-224ENST00000637721 CHD4Q14839 1912 aa17.91■□□□□ 0.46
SYNGAP1-224ENST00000637721 LOC102724428A0A0B4J2F2 783 aa17.9■□□□□ 0.46
SYNGAP1-224ENST00000637721 SIK1P57059 783 aa17.9■□□□□ 0.46
SYNGAP1-224ENST00000637721 DCAF5Q96JK2 942 aa17.9■□□□□ 0.46
SYNGAP1-224ENST00000637721 KDRP35968 1356 aa17.89■□□□□ 0.45
SYNGAP1-224ENST00000637721 UBR3Q6ZT12 1888 aa17.88■□□□□ 0.45
SYNGAP1-224ENST00000637721 ZNF831Q5JPB2 1677 aa17.88■□□□□ 0.45
SYNGAP1-224ENST00000637721 SSFA2P28290 1259 aa17.87■□□□□ 0.45
SYNGAP1-224ENST00000637721 IL13P35225 146 aa17.86■□□□□ 0.45
SYNGAP1-224ENST00000637721 ATP6V1AP38606 617 aa17.86■□□□□ 0.45
SYNGAP1-224ENST00000637721 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
SYNGAP1-224ENST00000637721 KLHL34Q8N239 644 aa17.86■□□□□ 0.45
SYNGAP1-224ENST00000637721 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
SYNGAP1-224ENST00000637721 ASAP1Q9ULH1 1129 aa17.86■□□□□ 0.45
SYNGAP1-224ENST00000637721 PER1O15534 1290 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms