RNA–Protein interactions for RNA: ENST00000637616.1

CACNA1A-243, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-243ENST00000637616 MPNDQ8N594 471 aa24.78■■□□□ 1.56
CACNA1A-243ENST00000637616 MEIS3Q99687 375 aa24.78■■□□□ 1.56
CACNA1A-243ENST00000637616 CEP85Q6P2H3 762 aa24.77■■□□□ 1.56
CACNA1A-243ENST00000637616 ANKRD44Q8N8A2 993 aa24.77■■□□□ 1.56
CACNA1A-243ENST00000637616 TPRNQ4KMQ1 711 aa24.77■■□□□ 1.56
CACNA1A-243ENST00000637616 KNDC1Q76NI1 1749 aa24.77■■□□□ 1.56
CACNA1A-243ENST00000637616 NCKAP5LQ9HCH0 1330 aa24.76■■□□□ 1.55
CACNA1A-243ENST00000637616 NEK4P51957 841 aa24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 FBXO31Q5XUX0 539 aaPredicted RBP24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 OSCARQ8IYS5 282 aa24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 PDLIM2Q96JY6 352 aa24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 CWC22Q9HCG8 908 aaKnown RBP24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 ZFYVE9O95405 1425 aa24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 CASC1Q6TDU7 716 aa24.75■■□□□ 1.55
CACNA1A-243ENST00000637616 HECW2Q9P2P5 1572 aa24.73■■□□□ 1.55
CACNA1A-243ENST00000637616 AEBP1Q8IUX7 1158 aa24.73■■□□□ 1.55
CACNA1A-243ENST00000637616 MCM10Q7L590 875 aa24.73■■□□□ 1.55
CACNA1A-243ENST00000637616 POGZQ7Z3K3 1410 aa24.73■■□□□ 1.55
CACNA1A-243ENST00000637616 UQCRHLA0A096LP55 91 aa24.72■■□□□ 1.55
CACNA1A-243ENST00000637616 UQCRHP07919 91 aa24.72■■□□□ 1.55
CACNA1A-243ENST00000637616 MIS18AQ9NYP9 233 aa24.72■■□□□ 1.55
CACNA1A-243ENST00000637616 LRSAM1Q6UWE0 723 aa24.72■■□□□ 1.55
CACNA1A-243ENST00000637616 SLC4A10Q6U841 1118 aa24.71■■□□□ 1.55
CACNA1A-243ENST00000637616 MSH6P52701 1360 aa24.71■■□□□ 1.55
CACNA1A-243ENST00000637616 GDPD2Q9HCC8 539 aa24.71■■□□□ 1.55
CACNA1A-243ENST00000637616 STAG3Q9UJ98 1225 aa24.71■■□□□ 1.55
CACNA1A-243ENST00000637616 ATP10DQ9P241 1426 aa24.71■■□□□ 1.55
CACNA1A-243ENST00000637616 RIMS2Q9UQ26 1411 aa24.7■■□□□ 1.55
CACNA1A-243ENST00000637616 TMX3Q96JJ7 454 aa24.7■■□□□ 1.55
CACNA1A-243ENST00000637616 ZKSCAN5Q9Y2L8 839 aa24.7■■□□□ 1.55
CACNA1A-243ENST00000637616 ERC2O15083 957 aa24.7■■□□□ 1.54
CACNA1A-243ENST00000637616 REC8O95072 547 aa24.7■■□□□ 1.54
CACNA1A-243ENST00000637616 ZNF500O60304 480 aaPredicted RBP24.7■■□□□ 1.54
CACNA1A-243ENST00000637616 RPAP2Q8IXW5 612 aaPredicted RBP24.7■■□□□ 1.54
CACNA1A-243ENST00000637616 ANKRD26Q9UPS8 1709 aa24.69■■□□□ 1.54
CACNA1A-243ENST00000637616 F6X3S4 739 aa24.69■■□□□ 1.54
CACNA1A-243ENST00000637616 NPM1P06748 294 aaKnown RBP eCLIP24.69■■□□□ 1.54
CACNA1A-243ENST00000637616 SLC52A1Q9NWF4 448 aa24.69■■□□□ 1.54
CACNA1A-243ENST00000637616 PIK3C2BO00750 1634 aa24.69■■□□□ 1.54
CACNA1A-243ENST00000637616 HS1BP3Q53T59 392 aa24.68■■□□□ 1.54
CACNA1A-243ENST00000637616 ARHGAP31Q2M1Z3 1444 aa24.68■■□□□ 1.54
CACNA1A-243ENST00000637616 RTL1A6NKG5 1358 aa24.68■■□□□ 1.54
CACNA1A-243ENST00000637616 LMOD3Q0VAK6 560 aa24.67■■□□□ 1.54
CACNA1A-243ENST00000637616 PALD1Q9ULE6 856 aa24.67■■□□□ 1.54
CACNA1A-243ENST00000637616 EXOC6BQ9Y2D4 811 aa24.67■■□□□ 1.54
CACNA1A-243ENST00000637616 MAP2P11137 1827 aaKnown RBP24.67■■□□□ 1.54
CACNA1A-243ENST00000637616 ARHGEF40Q8TER5 1519 aa24.67■■□□□ 1.54
CACNA1A-243ENST00000637616 MLH3Q9UHC1 1453 aa24.66■■□□□ 1.54
CACNA1A-243ENST00000637616 SLC4A2P04920 1241 aa24.66■■□□□ 1.54
CACNA1A-243ENST00000637616 SULT6B1Q6IMI4 303 aa24.65■■□□□ 1.54
CACNA1A-243ENST00000637616 JARID2Q92833 1246 aaPredicted RBP24.65■■□□□ 1.54
CACNA1A-243ENST00000637616 CDC42BPGQ6DT37 1551 aa24.65■■□□□ 1.54
CACNA1A-243ENST00000637616 PTMAP06454 111 aaKnown RBP24.65■■□□□ 1.54
CACNA1A-243ENST00000637616 PDE1AP54750 535 aa24.64■■□□□ 1.54
CACNA1A-243ENST00000637616 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.64■■□□□ 1.54
CACNA1A-243ENST00000637616 MYO5BQ9ULV0 1848 aa24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 RGS12O14924 1447 aa24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 G2E3Q7L622 706 aa24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 UPF3BQ9BZI7 483 aaKnown RBP24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 SOX12O15370 315 aa24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 GADD45BO75293 160 aaPredicted RBP24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 COG3Q96JB2 828 aa24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 ZNF830Q96NB3 372 aaPredicted RBP24.63■■□□□ 1.53
CACNA1A-243ENST00000637616 RILPL2Q969X0 211 aa24.62■■□□□ 1.53
CACNA1A-243ENST00000637616 KIF20BQ96Q89 1820 aa24.62■■□□□ 1.53
CACNA1A-243ENST00000637616 ANO2Q9NQ90 1003 aa24.61■■□□□ 1.53
CACNA1A-243ENST00000637616 CCDC39Q9UFE4 941 aa24.61■■□□□ 1.53
CACNA1A-243ENST00000637616 TRIM6-TRIM34B2RNG4 842 aa24.6■■□□□ 1.53
CACNA1A-243ENST00000637616 TERF1P54274 439 aa24.6■■□□□ 1.53
CACNA1A-243ENST00000637616 DTNBO60941 627 aa24.59■■□□□ 1.53
CACNA1A-243ENST00000637616 BRD1O95696 1058 aa24.59■■□□□ 1.53
CACNA1A-243ENST00000637616 REREQ9P2R6 1566 aa24.59■■□□□ 1.53
CACNA1A-243ENST00000637616 KIF24Q5T7B8 1368 aa24.59■■□□□ 1.53
CACNA1A-243ENST00000637616 TSC1Q92574 1164 aa24.58■■□□□ 1.53
CACNA1A-243ENST00000637616 YEATS2Q9ULM3 1422 aa24.58■■□□□ 1.53
CACNA1A-243ENST00000637616 TSPY26PQ9H489 355 aa24.58■■□□□ 1.53
CACNA1A-243ENST00000637616 DLG5Q8TDM6 1919 aa24.58■■□□□ 1.52
CACNA1A-243ENST00000637616 CHL1O00533 1208 aa24.57■■□□□ 1.52
CACNA1A-243ENST00000637616 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.57■■□□□ 1.52
CACNA1A-243ENST00000637616 MBD3O95983 291 aa24.57■■□□□ 1.52
CACNA1A-243ENST00000637616 ESYT1Q9BSJ8 1104 aa24.57■■□□□ 1.52
CACNA1A-243ENST00000637616 DNTTIP2Q5QJE6 756 aaKnown RBP24.56■■□□□ 1.52
CACNA1A-243ENST00000637616 LARP6Q9BRS8 491 aaKnown RBP24.56■■□□□ 1.52
CACNA1A-243ENST00000637616 TXNDC2Q86VQ3 553 aa24.56■■□□□ 1.52
CACNA1A-243ENST00000637616 C17orf53Q8N3J3 647 aaPredicted RBP24.56■■□□□ 1.52
CACNA1A-243ENST00000637616 FOXO3O43524 673 aa24.55■■□□□ 1.52
CACNA1A-243ENST00000637616 EIF4A2Q14240 407 aaKnown RBP24.55■■□□□ 1.52
CACNA1A-243ENST00000637616 NECTIN2Q92692 538 aa24.55■■□□□ 1.52
CACNA1A-243ENST00000637616 HMMRO75330 724 aa24.55■■□□□ 1.52
CACNA1A-243ENST00000637616 CSPP1Q1MSJ5 1256 aa24.55■■□□□ 1.52
CACNA1A-243ENST00000637616 ALKQ9UM73 1620 aa24.55■■□□□ 1.52
CACNA1A-243ENST00000637616 NUTM2FA1L443 756 aa24.54■■□□□ 1.52
CACNA1A-243ENST00000637616 UNC5CLQ8IV45 518 aa24.54■■□□□ 1.52
CACNA1A-243ENST00000637616 CLTCQ00610 1675 aaKnown RBP24.54■■□□□ 1.52
CACNA1A-243ENST00000637616 USP48Q86UV5 1035 aa24.54■■□□□ 1.52
CACNA1A-243ENST00000637616 NUDT16Q96DE0 195 aaKnown RBP24.53■■□□□ 1.52
CACNA1A-243ENST00000637616 WASLO00401 505 aaPredicted RBP24.53■■□□□ 1.52
CACNA1A-243ENST00000637616 IL25Q9H293 177 aa24.53■■□□□ 1.52
CACNA1A-243ENST00000637616 SASS6Q6UVJ0 657 aa24.52■■□□□ 1.52
CACNA1A-243ENST00000637616 PRDM10Q9NQV6 1147 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms