RNA–Protein interactions for RNA: ENST00000637552.1

CHRNA7-229, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 955 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-229ENST00000637552 PDGFDQ9GZP0 370 aaPredicted RBP31.6■■■□□ 2.65
CHRNA7-229ENST00000637552 DOT1LQ8TEK3 1739 aa31.59■■■□□ 2.65
CHRNA7-229ENST00000637552 SHANK3Q9BYB0 1731 aa31.59■■■□□ 2.65
CHRNA7-229ENST00000637552 ZBTB7AO95365 584 aa31.59■■■□□ 2.65
CHRNA7-229ENST00000637552 SYTL4Q96C24 671 aaPredicted RBP31.59■■■□□ 2.65
CHRNA7-229ENST00000637552 HSP90AB2PQ58FF8 381 aa31.58■■■□□ 2.65
CHRNA7-229ENST00000637552 RAPGEF4Q8WZA2 1011 aa31.58■■■□□ 2.65
CHRNA7-229ENST00000637552 PAPPAQ13219 1627 aa31.57■■■□□ 2.64
CHRNA7-229ENST00000637552 CGNL1Q0VF96 1302 aa31.57■■■□□ 2.64
CHRNA7-229ENST00000637552 TATP17735 454 aaPredicted RBP31.54■■■□□ 2.64
CHRNA7-229ENST00000637552 PRIM1P49642 420 aaKnown RBP31.54■■■□□ 2.64
CHRNA7-229ENST00000637552 EIF4G2P78344 907 aaKnown RBP eCLIP31.54■■■□□ 2.64
CHRNA7-229ENST00000637552 EMILIN1Q9Y6C2 1016 aa31.54■■■□□ 2.64
CHRNA7-229ENST00000637552 ATF5Q9Y2D1 282 aaPredicted RBP31.52■■■□□ 2.64
CHRNA7-229ENST00000637552 PPM1GO15355 546 aaPredicted RBP31.51■■■□□ 2.63
CHRNA7-229ENST00000637552 SLC27A3Q5K4L6 730 aa31.51■■■□□ 2.63
CHRNA7-229ENST00000637552 LRRC4BQ9NT99 713 aa31.5■■■□□ 2.63
CHRNA7-229ENST00000637552 MTFR1LQ9H019 292 aa31.49■■■□□ 2.63
CHRNA7-229ENST00000637552 ANKRD26Q9UPS8 1709 aa31.49■■■□□ 2.63
CHRNA7-229ENST00000637552 HSPA5P11021 654 aaKnown RBP31.48■■■□□ 2.63
CHRNA7-229ENST00000637552 NSD2O96028 1365 aa31.47■■■□□ 2.63
CHRNA7-229ENST00000637552 DCAF8L1A6NGE4 600 aa31.47■■■□□ 2.63
CHRNA7-229ENST00000637552 ZNF827Q17R98 1081 aa31.47■■■□□ 2.63
CHRNA7-229ENST00000637552 PCDH11XQ9BZA7 1347 aa31.47■■■□□ 2.63
CHRNA7-229ENST00000637552 PCDH11YQ9BZA8 1340 aa31.47■■■□□ 2.63
CHRNA7-229ENST00000637552 PTGER2P43116 358 aa31.46■■■□□ 2.63
CHRNA7-229ENST00000637552 MAP2P11137 1827 aaKnown RBP31.46■■■□□ 2.63
CHRNA7-229ENST00000637552 LY75O60449 1722 aa31.44■■■□□ 2.62
CHRNA7-229ENST00000637552 WASHC2AQ641Q2 1341 aa31.42■■■□□ 2.62
CHRNA7-229ENST00000637552 AKT1S1Q96B36 256 aa31.41■■■□□ 2.62
CHRNA7-229ENST00000637552 QSER1Q2KHR3 1735 aa31.39■■■□□ 2.62
CHRNA7-229ENST00000637552 KCNQ4P56696 695 aa31.39■■■□□ 2.62
CHRNA7-229ENST00000637552 CCNL1Q9UK58 526 aaPredicted RBP31.39■■■□□ 2.62
CHRNA7-229ENST00000637552 PKD1L3Q7Z443 1732 aa31.38■■■□□ 2.61
CHRNA7-229ENST00000637552 TNNT2P45379 298 aaPredicted RBP31.38■■■□□ 2.61
CHRNA7-229ENST00000637552 POLKQ9UBT6 870 aa31.38■■■□□ 2.61
CHRNA7-229ENST00000637552 NCAPD2Q15021 1401 aa31.38■■■□□ 2.61
CHRNA7-229ENST00000637552 TFCP2L1Q9NZI6 479 aa31.37■■■□□ 2.61
CHRNA7-229ENST00000637552 SGIP1Q9BQI5 828 aa31.36■■■□□ 2.61
CHRNA7-229ENST00000637552 PANK3Q9H999 370 aa31.36■■■□□ 2.61
CHRNA7-229ENST00000637552 CYP27B1O15528 508 aa31.35■■■□□ 2.61
CHRNA7-229ENST00000637552 TUBGCP6Q96RT7 1819 aa31.34■■■□□ 2.61
CHRNA7-229ENST00000637552 FHDC1Q9C0D6 1143 aaPredicted RBP31.34■■■□□ 2.61
CHRNA7-229ENST00000637552 PNPLA7Q6ZV29 1317 aa31.33■■■□□ 2.61
CHRNA7-229ENST00000637552 ARXQ96QS3 562 aa31.33■■■□□ 2.61
CHRNA7-229ENST00000637552 EYA1Q99502 592 aa31.33■■■□□ 2.61
CHRNA7-229ENST00000637552 SPG7Q9UQ90 795 aa31.33■■■□□ 2.61
CHRNA7-229ENST00000637552 MPRIPQ6WCQ1 1025 aa31.32■■■□□ 2.6
CHRNA7-229ENST00000637552 SLC16A10Q8TF71 515 aa31.32■■■□□ 2.6
CHRNA7-229ENST00000637552 TOGARAM1Q9Y4F4 1720 aa31.3■■■□□ 2.6
CHRNA7-229ENST00000637552 YY1P25490 414 aa31.3■■■□□ 2.6
CHRNA7-229ENST00000637552 SYT17Q9BSW7 474 aa31.3■■■□□ 2.6
CHRNA7-229ENST00000637552 ITGB4P16144 1822 aa31.29■■■□□ 2.6
CHRNA7-229ENST00000637552 PALLDQ8WX93 1383 aa31.29■■■□□ 2.6
CHRNA7-229ENST00000637552 EIF4A2Q14240 407 aaKnown RBP31.28■■■□□ 2.6
CHRNA7-229ENST00000637552 POLD1P28340 1107 aa31.27■■■□□ 2.6
CHRNA7-229ENST00000637552 C5P01031 1676 aa31.27■■■□□ 2.6
CHRNA7-229ENST00000637552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.26■■■□□ 2.59
CHRNA7-229ENST00000637552 HMGB2P26583 209 aaKnown RBP31.25■■■□□ 2.59
CHRNA7-229ENST00000637552 SMARCC1Q92922 1105 aaPredicted RBP31.24■■■□□ 2.59
CHRNA7-229ENST00000637552 MSH5O43196 834 aa31.23■■■□□ 2.59
CHRNA7-229ENST00000637552 NKX1-1Q15270 411 aaPredicted RBP31.23■■■□□ 2.59
CHRNA7-229ENST00000637552 MAP3K5Q99683 1374 aa31.22■■■□□ 2.59
CHRNA7-229ENST00000637552 MORC1Q86VD1 984 aa31.22■■■□□ 2.59
CHRNA7-229ENST00000637552 KNSTRNQ9Y448 316 aa31.22■■■□□ 2.59
CHRNA7-229ENST00000637552 COL24A1Q17RW2 1714 aa31.21■■■□□ 2.59
CHRNA7-229ENST00000637552 TAF1LQ8IZX4 1826 aa31.21■■■□□ 2.59
CHRNA7-229ENST00000637552 IFNL2Q8IZJ0 200 aa31.2■■■□□ 2.59
CHRNA7-229ENST00000637552 KLHL34Q8N239 644 aa31.2■■■□□ 2.59
CHRNA7-229ENST00000637552 PIGBQ92521 554 aa31.2■■■□□ 2.59
CHRNA7-229ENST00000637552 IGSF1Q8N6C5 1336 aa31.19■■■□□ 2.58
CHRNA7-229ENST00000637552 PLEKHG2Q9H7P9 1386 aa31.18■■■□□ 2.58
CHRNA7-229ENST00000637552 PHKG2P15735 406 aa31.18■■■□□ 2.58
CHRNA7-229ENST00000637552 TMOD3Q9NYL9 352 aa31.18■■■□□ 2.58
CHRNA7-229ENST00000637552 COL23A1Q86Y22 540 aaPredicted RBP31.17■■■□□ 2.58
CHRNA7-229ENST00000637552 UTRNP46939 3433 aa31.15■■■□□ 2.58
CHRNA7-229ENST00000637552 C4BP0C0L5 1744 aa31.14■■■□□ 2.58
CHRNA7-229ENST00000637552 FLAD1Q8NFF5 587 aa31.13■■■□□ 2.57
CHRNA7-229ENST00000637552 AK7Q96M32 723 aa31.13■■■□□ 2.57
CHRNA7-229ENST00000637552 KIF7Q2M1P5 1343 aa31.13■■■□□ 2.57
CHRNA7-229ENST00000637552 LOC102724428A0A0B4J2F2 783 aa31.09■■■□□ 2.57
CHRNA7-229ENST00000637552 SIK1P57059 783 aa31.09■■■□□ 2.57
CHRNA7-229ENST00000637552 PLEKHO1Q53GL0 409 aaPredicted RBP31.09■■■□□ 2.57
CHRNA7-229ENST00000637552 MSL1Q68DK7 614 aa31.09■■■□□ 2.57
CHRNA7-229ENST00000637552 HSP90AB1P08238 724 aaKnown RBP31.07■■■□□ 2.56
CHRNA7-229ENST00000637552 ASAP1Q9ULH1 1129 aa31.07■■■□□ 2.56
CHRNA7-229ENST00000637552 GPR162Q16538 588 aa31.06■■■□□ 2.56
CHRNA7-229ENST00000637552 AMER1Q5JTC6 1135 aaPredicted RBP31.06■■■□□ 2.56
CHRNA7-229ENST00000637552 ZNF530Q6P9A1 599 aaPredicted RBP31.06■■■□□ 2.56
CHRNA7-229ENST00000637552 AMOTQ4VCS5 1084 aa31.05■■■□□ 2.56
CHRNA7-229ENST00000637552 UBR3Q6ZT12 1888 aa31.05■■■□□ 2.56
CHRNA7-229ENST00000637552 CHD4Q14839 1912 aa31.04■■■□□ 2.56
CHRNA7-229ENST00000637552 PHF14O94880 888 aa31.04■■■□□ 2.56
CHRNA7-229ENST00000637552 AEBP1Q8IUX7 1158 aa31.04■■■□□ 2.56
CHRNA7-229ENST00000637552 DCAF5Q96JK2 942 aa31.04■■■□□ 2.56
CHRNA7-229ENST00000637552 ERVV-2B6SEH9 535 aa31.03■■■□□ 2.56
CHRNA7-229ENST00000637552 LINC00116Q8NCU8 138 aa31.03■■■□□ 2.56
CHRNA7-229ENST00000637552 ATP6V1AP38606 617 aa31.02■■■□□ 2.56
CHRNA7-229ENST00000637552 PELP1Q8IZL8 1130 aaKnown RBP31.02■■■□□ 2.56
CHRNA7-229ENST00000637552 ATG3Q9NT62 314 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms