RNA–Protein interactions for RNA: ENST00000637381.1

CTSD-210, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 374 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-210ENST00000637381 NSD3Q9BZ95 1437 aa17.7■□□□□ 0.42
CTSD-210ENST00000637381 MAP2P11137 1827 aaKnown RBP17.68■□□□□ 0.42
CTSD-210ENST00000637381 SMG6Q86US8 1419 aaKnown RBP17.68■□□□□ 0.42
CTSD-210ENST00000637381 DOT1LQ8TEK3 1739 aa17.68■□□□□ 0.42
CTSD-210ENST00000637381 LY75O60449 1722 aa17.67■□□□□ 0.42
CTSD-210ENST00000637381 LRRC4BQ9NT99 713 aa17.67■□□□□ 0.42
CTSD-210ENST00000637381 QSER1Q2KHR3 1735 aa17.67■□□□□ 0.42
CTSD-210ENST00000637381 NSD2O96028 1365 aa17.66■□□□□ 0.42
CTSD-210ENST00000637381 NCAPD2Q15021 1401 aa17.66■□□□□ 0.42
CTSD-210ENST00000637381 PTGER2P43116 358 aa17.66■□□□□ 0.42
CTSD-210ENST00000637381 PRIM1P49642 420 aaKnown RBP17.65■□□□□ 0.42
CTSD-210ENST00000637381 EIF4G2P78344 907 aaKnown RBP eCLIP17.65■□□□□ 0.42
CTSD-210ENST00000637381 SLC27A3Q5K4L6 730 aa17.65■□□□□ 0.42
CTSD-210ENST00000637381 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.41
CTSD-210ENST00000637381 RAPGEF4Q8WZA2 1011 aa17.64■□□□□ 0.41
CTSD-210ENST00000637381 EMILIN1Q9Y6C2 1016 aa17.64■□□□□ 0.41
CTSD-210ENST00000637381 WASHC2AQ641Q2 1341 aa17.64■□□□□ 0.41
CTSD-210ENST00000637381 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
CTSD-210ENST00000637381 HSPA5P11021 654 aaKnown RBP17.63■□□□□ 0.41
CTSD-210ENST00000637381 AKT1S1Q96B36 256 aa17.63■□□□□ 0.41
CTSD-210ENST00000637381 SGIP1Q9BQI5 828 aa17.63■□□□□ 0.41
CTSD-210ENST00000637381 PPP1R1BQ9UD71 204 aaPredicted RBP17.63■□□□□ 0.41
CTSD-210ENST00000637381 COL24A1Q17RW2 1714 aa17.62■□□□□ 0.41
CTSD-210ENST00000637381 PKD1L3Q7Z443 1732 aa17.62■□□□□ 0.41
CTSD-210ENST00000637381 TATP17735 454 aaPredicted RBP17.62■□□□□ 0.41
CTSD-210ENST00000637381 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
CTSD-210ENST00000637381 MTFR1LQ9H019 292 aa17.62■□□□□ 0.41
CTSD-210ENST00000637381 ZNF827Q17R98 1081 aa17.61■□□□□ 0.41
CTSD-210ENST00000637381 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
CTSD-210ENST00000637381 ATF5Q9Y2D1 282 aaPredicted RBP17.6■□□□□ 0.41
CTSD-210ENST00000637381 TUBGCP6Q96RT7 1819 aa17.59■□□□□ 0.41
CTSD-210ENST00000637381 PCDH11XQ9BZA7 1347 aa17.59■□□□□ 0.41
CTSD-210ENST00000637381 PCDH11YQ9BZA8 1340 aa17.59■□□□□ 0.41
CTSD-210ENST00000637381 SYTL4Q96C24 671 aaPredicted RBP17.59■□□□□ 0.41
CTSD-210ENST00000637381 CYP27B1O15528 508 aa17.58■□□□□ 0.4
CTSD-210ENST00000637381 ITGB4P16144 1822 aa17.58■□□□□ 0.4
CTSD-210ENST00000637381 NKX1-1Q15270 411 aaPredicted RBP17.57■□□□□ 0.4
CTSD-210ENST00000637381 SLC16A10Q8TF71 515 aa17.57■□□□□ 0.4
CTSD-210ENST00000637381 PANK3Q9H999 370 aa17.57■□□□□ 0.4
CTSD-210ENST00000637381 TOGARAM1Q9Y4F4 1720 aa17.56■□□□□ 0.4
CTSD-210ENST00000637381 PPM1GO15355 546 aaPredicted RBP17.56■□□□□ 0.4
CTSD-210ENST00000637381 EYA1Q99502 592 aa17.56■□□□□ 0.4
CTSD-210ENST00000637381 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
CTSD-210ENST00000637381 PLEKHG2Q9H7P9 1386 aa17.54■□□□□ 0.4
CTSD-210ENST00000637381 TAF1LQ8IZX4 1826 aa17.54■□□□□ 0.4
CTSD-210ENST00000637381 PNPLA7Q6ZV29 1317 aa17.54■□□□□ 0.4
CTSD-210ENST00000637381 KCNQ4P56696 695 aa17.54■□□□□ 0.4
CTSD-210ENST00000637381 POLR3GLQ9BT43 218 aa17.54■□□□□ 0.4
CTSD-210ENST00000637381 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
CTSD-210ENST00000637381 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
CTSD-210ENST00000637381 CCNL1Q9UK58 526 aaPredicted RBP17.53■□□□□ 0.4
CTSD-210ENST00000637381 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
CTSD-210ENST00000637381 C5P01031 1676 aa17.52■□□□□ 0.4
CTSD-210ENST00000637381 HMGB2P26583 209 aaKnown RBP17.52■□□□□ 0.4
CTSD-210ENST00000637381 EIF4A2Q14240 407 aaKnown RBP17.52■□□□□ 0.4
CTSD-210ENST00000637381 ARXQ96QS3 562 aa17.52■□□□□ 0.4
CTSD-210ENST00000637381 FHDC1Q9C0D6 1143 aaPredicted RBP17.52■□□□□ 0.4
CTSD-210ENST00000637381 TFCP2L1Q9NZI6 479 aa17.52■□□□□ 0.4
CTSD-210ENST00000637381 DCAF8L1A6NGE4 600 aa17.5■□□□□ 0.39
CTSD-210ENST00000637381 MPRIPQ6WCQ1 1025 aa17.5■□□□□ 0.39
CTSD-210ENST00000637381 IGSF1Q8N6C5 1336 aa17.49■□□□□ 0.39
CTSD-210ENST00000637381 TNNT2P45379 298 aaPredicted RBP17.49■□□□□ 0.39
CTSD-210ENST00000637381 PIGBQ92521 554 aa17.48■□□□□ 0.39
CTSD-210ENST00000637381 SMARCC1Q92922 1105 aaPredicted RBP17.48■□□□□ 0.39
CTSD-210ENST00000637381 PALLDQ8WX93 1383 aa17.48■□□□□ 0.39
CTSD-210ENST00000637381 UTRNP46939 3433 aa17.47■□□□□ 0.39
CTSD-210ENST00000637381 PHKG2P15735 406 aa17.47■□□□□ 0.39
CTSD-210ENST00000637381 IFNL2Q8IZJ0 200 aa17.47■□□□□ 0.39
CTSD-210ENST00000637381 YY1P25490 414 aa17.46■□□□□ 0.39
CTSD-210ENST00000637381 COL23A1Q86Y22 540 aaPredicted RBP17.46■□□□□ 0.39
CTSD-210ENST00000637381 C4BP0C0L5 1744 aa17.46■□□□□ 0.39
CTSD-210ENST00000637381 AMER1Q5JTC6 1135 aaPredicted RBP17.45■□□□□ 0.38
CTSD-210ENST00000637381 MORC1Q86VD1 984 aa17.45■□□□□ 0.38
CTSD-210ENST00000637381 KNSTRNQ9Y448 316 aa17.45■□□□□ 0.38
CTSD-210ENST00000637381 KIF7Q2M1P5 1343 aa17.45■□□□□ 0.38
CTSD-210ENST00000637381 POLD1P28340 1107 aa17.44■□□□□ 0.38
CTSD-210ENST00000637381 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
CTSD-210ENST00000637381 PER1O15534 1290 aaPredicted RBP17.43■□□□□ 0.38
CTSD-210ENST00000637381 FLAD1Q8NFF5 587 aa17.43■□□□□ 0.38
CTSD-210ENST00000637381 CHD4Q14839 1912 aa17.43■□□□□ 0.38
CTSD-210ENST00000637381 ZNF831Q5JPB2 1677 aa17.42■□□□□ 0.38
CTSD-210ENST00000637381 TMOD3Q9NYL9 352 aa17.42■□□□□ 0.38
CTSD-210ENST00000637381 ERVV-2B6SEH9 535 aa17.41■□□□□ 0.38
CTSD-210ENST00000637381 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
CTSD-210ENST00000637381 KDRP35968 1356 aa17.4■□□□□ 0.38
CTSD-210ENST00000637381 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
CTSD-210ENST00000637381 SIK1P57059 783 aa17.4■□□□□ 0.38
CTSD-210ENST00000637381 AMOTQ4VCS5 1084 aa17.4■□□□□ 0.38
CTSD-210ENST00000637381 PLEKHO1Q53GL0 409 aaPredicted RBP17.4■□□□□ 0.38
CTSD-210ENST00000637381 DCAF5Q96JK2 942 aa17.4■□□□□ 0.38
CTSD-210ENST00000637381 HSP90AB1P08238 724 aaKnown RBP17.39■□□□□ 0.37
CTSD-210ENST00000637381 IL13P35225 146 aa17.39■□□□□ 0.37
CTSD-210ENST00000637381 ATG3Q9NT62 314 aa17.39■□□□□ 0.37
CTSD-210ENST00000637381 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
CTSD-210ENST00000637381 GOLGB1Q14789 3259 aaKnown RBP17.38■□□□□ 0.37
CTSD-210ENST00000637381 MSH5O43196 834 aa17.37■□□□□ 0.37
CTSD-210ENST00000637381 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
CTSD-210ENST00000637381 LINC00116Q8NCU8 138 aa17.37■□□□□ 0.37
CTSD-210ENST00000637381 KDM6AO15550 1401 aaPredicted RBP17.37■□□□□ 0.37
CTSD-210ENST00000637381 SSFA2P28290 1259 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms