RNA–Protein interactions for RNA: ENST00000636987.1

ARHGEF4-218, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

TSL 2

Gene ARHGEF4, Length 3,656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-218ENST00000636987 PPLO60437 1756 aa12.39□□□□□ -0.43
ARHGEF4-218ENST00000636987 ADAMTS13Q76LX8 1427 aa12.39□□□□□ -0.43
ARHGEF4-218ENST00000636987 ZNF335Q9H4Z2 1342 aaPredicted RBP12.39□□□□□ -0.43
ARHGEF4-218ENST00000636987 NINLQ9Y2I6 1382 aa12.39□□□□□ -0.43
ARHGEF4-218ENST00000636987 ZKSCAN5Q9Y2L8 839 aa12.39□□□□□ -0.43
ARHGEF4-218ENST00000636987 ZNF521Q96K83 1311 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 SMAP1Q8IYB5 467 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 ALKQ9UM73 1620 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 ST18O60284 1047 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 IRX3P78415 501 aaPredicted RBP12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 SMC5Q8IY18 1101 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 MTHFSP49914 203 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 TMEM57Q8N5G2 664 aa12.38□□□□□ -0.43
ARHGEF4-218ENST00000636987 CHD1LQ86WJ1 897 aa12.37□□□□□ -0.43
ARHGEF4-218ENST00000636987 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF4-218ENST00000636987 GPRASP1Q5JY77 1395 aa12.37□□□□□ -0.43
ARHGEF4-218ENST00000636987 KIF16BQ96L93 1317 aa12.37□□□□□ -0.43
ARHGEF4-218ENST00000636987 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
ARHGEF4-218ENST00000636987 CD2BP2O95400 341 aaKnown RBP12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 PPP1R9BQ96SB3 815 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 CDK19Q9BWU1 502 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 NOL7Q9UMY1 257 aaKnown RBP12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 ARHGAP23Q9P227 1491 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 ROBO2Q9HCK4 1378 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 TRIM27P14373 513 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 SYAP1Q96A49 352 aaPredicted RBP12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 SLIT1O75093 1534 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 TRPM1Q7Z4N2 1603 aa12.36□□□□□ -0.43
ARHGEF4-218ENST00000636987 ATF7IPQ6VMQ6 1270 aa12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 DRC7Q8IY82 874 aa12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 CCDC94Q9BW85 323 aaPredicted RBP12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 SLC12A5Q9H2X9 1139 aa12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 HDAC5Q9UQL6 1122 aa12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 NRXN1Q9ULB1 1477 aa12.35□□□□□ -0.43
ARHGEF4-218ENST00000636987 TBC1D9Q6ZT07 1266 aa12.34□□□□□ -0.43
ARHGEF4-218ENST00000636987 FAM193AP78312 1265 aa12.34□□□□□ -0.43
ARHGEF4-218ENST00000636987 C17orf53Q8N3J3 647 aaPredicted RBP12.34□□□□□ -0.43
ARHGEF4-218ENST00000636987 SNX21Q969T3 373 aa12.34□□□□□ -0.43
ARHGEF4-218ENST00000636987 KIF3AQ9Y496 699 aa12.34□□□□□ -0.43
ARHGEF4-218ENST00000636987 ABCC11Q96J66 1382 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 CDC45O75419 566 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 APPP05067 770 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 TRMT2AQ8IZ69 625 aaKnown RBP12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 PDCL2Q8N4E4 241 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 PTPRUQ92729 1446 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 TSPY26PQ9H489 355 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
ARHGEF4-218ENST00000636987 NEURL4Q96JN8 1562 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 PKP1Q13835 747 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 SPC24Q8NBT2 197 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 TTC12Q9H892 705 aaPredicted RBP12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 USP25Q9UHP3 1055 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 ATF3P18847 181 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 CABP1Q9NZU7 370 aa12.32□□□□□ -0.44
ARHGEF4-218ENST00000636987 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 RABEP1Q15276 862 aa12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZNF692Q9BU19 519 aaPredicted RBP12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 IQGAP1P46940 1657 aa12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 IFT172Q9UG01 1749 aa12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZGPATQ8N5A5 531 aaKnown RBP12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 NGDNQ8NEJ9 315 aaKnown RBP12.31□□□□□ -0.44
ARHGEF4-218ENST00000636987 ASXL1Q8IXJ9 1541 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 RBM25P49756 843 aaKnown RBP12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 ESCO1Q5FWF5 840 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZNF592Q92610 1267 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 CHMP3Q9Y3E7 222 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZSCAN20P17040 1043 aaPredicted RBP12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 TERF1P54274 439 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 NEK4P51957 841 aa12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 NUDT16Q96DE0 195 aaKnown RBP12.3□□□□□ -0.44
ARHGEF4-218ENST00000636987 TMEM94Q12767 1356 aa12.29□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZNF500O60304 480 aaPredicted RBP12.29□□□□□ -0.44
ARHGEF4-218ENST00000636987 PHF14O94880 888 aa12.29□□□□□ -0.44
ARHGEF4-218ENST00000636987 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
ARHGEF4-218ENST00000636987 HS1BP3Q53T59 392 aa12.29□□□□□ -0.44
ARHGEF4-218ENST00000636987 MBD3O95983 291 aa12.28□□□□□ -0.44
ARHGEF4-218ENST00000636987 LRSAM1Q6UWE0 723 aa12.28□□□□□ -0.44
ARHGEF4-218ENST00000636987 SETBP1Q9Y6X0 1596 aa12.28□□□□□ -0.44
ARHGEF4-218ENST00000636987 BMP2KLQ5H9B9 411 aa12.28□□□□□ -0.44
ARHGEF4-218ENST00000636987 POLR1AO95602 1720 aaPredicted RBP12.28□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZNF445P59923 1031 aa12.27□□□□□ -0.44
ARHGEF4-218ENST00000636987 HDAC1Q13547 482 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF4-218ENST00000636987 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.44
ARHGEF4-218ENST00000636987 LMBRD1Q9NUN5 540 aa12.27□□□□□ -0.45
ARHGEF4-218ENST00000636987 MCM5P33992 734 aa12.27□□□□□ -0.45
ARHGEF4-218ENST00000636987 NUCB1Q02818 461 aa12.27□□□□□ -0.45
ARHGEF4-218ENST00000636987 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.45
ARHGEF4-218ENST00000636987 TMEM63CQ9P1W3 806 aa12.27□□□□□ -0.45
ARHGEF4-218ENST00000636987 INSRP06213 1382 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms