RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-231ENST00000636816 CHL1O00533 1208 aa20.39■□□□□ 0.85
CACNA1A-231ENST00000636816 MIS18AQ9NYP9 233 aa20.39■□□□□ 0.85
CACNA1A-231ENST00000636816 TCERG1O14776 1098 aaKnown RBP20.38■□□□□ 0.85
CACNA1A-231ENST00000636816 KRT24Q2M2I5 525 aa20.38■□□□□ 0.85
CACNA1A-231ENST00000636816 SLAIN2Q9P270 581 aa20.38■□□□□ 0.85
CACNA1A-231ENST00000636816 TRIM27P14373 513 aa20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 TWISTNBQ3B726 338 aaPredicted RBP20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 ALDH1L2Q3SY69 923 aa20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 SKAP1Q86WV1 359 aa20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 ANKRD24Q8TF21 1146 aa20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 KDM2BQ8NHM5 1336 aa20.37■□□□□ 0.85
CACNA1A-231ENST00000636816 SPATA31A3Q5VYP0 1347 aa20.36■□□□□ 0.85
CACNA1A-231ENST00000636816 TNS3Q68CZ2 1445 aa20.36■□□□□ 0.85
CACNA1A-231ENST00000636816 DZIP1LQ8IYY4 767 aaKnown RBP20.35■□□□□ 0.85
CACNA1A-231ENST00000636816 GNAT3A8MTJ3 354 aa20.35■□□□□ 0.85
CACNA1A-231ENST00000636816 ATF7IPQ6VMQ6 1270 aa20.34■□□□□ 0.85
CACNA1A-231ENST00000636816 MRPL50Q8N5N7 158 aaKnown RBP20.34■□□□□ 0.85
CACNA1A-231ENST00000636816 IL17REQ8NFR9 667 aa20.34■□□□□ 0.85
CACNA1A-231ENST00000636816 ZNF428Q96B54 188 aa20.34■□□□□ 0.85
CACNA1A-231ENST00000636816 FTSJ3Q8IY81 847 aaKnown RBP20.33■□□□□ 0.84
CACNA1A-231ENST00000636816 RBM19Q9Y4C8 960 aaKnown RBP20.33■□□□□ 0.84
CACNA1A-231ENST00000636816 IGHDP01880 384 aa20.32■□□□□ 0.84
CACNA1A-231ENST00000636816 MVPQ14764 893 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-231ENST00000636816 HTATSF1O43719 755 aaKnown RBP20.32■□□□□ 0.84
CACNA1A-231ENST00000636816 KIF16BQ96L93 1317 aa20.31■□□□□ 0.84
CACNA1A-231ENST00000636816 MAP3K5Q99683 1374 aa20.31■□□□□ 0.84
CACNA1A-231ENST00000636816 BRPF1P55201 1214 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-231ENST00000636816 CENPQQ7L2Z9 268 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-231ENST00000636816 CHRNA2Q15822 529 aa20.3■□□□□ 0.84
CACNA1A-231ENST00000636816 CRYBG1Q9Y4K1 1723 aa20.3■□□□□ 0.84
CACNA1A-231ENST00000636816 IPO8O15397 1037 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-231ENST00000636816 TMEM57Q8N5G2 664 aa20.3■□□□□ 0.84
CACNA1A-231ENST00000636816 TSPYL4Q9UJ04 414 aa20.3■□□□□ 0.84
CACNA1A-231ENST00000636816 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
CACNA1A-231ENST00000636816 COL18A1P39060 1754 aa20.29■□□□□ 0.84
CACNA1A-231ENST00000636816 MS4A1P11836 297 aa20.29■□□□□ 0.84
CACNA1A-231ENST00000636816 ERBB3P21860 1342 aa20.28■□□□□ 0.84
CACNA1A-231ENST00000636816 LRRC37A3O60309 1634 aa20.28■□□□□ 0.84
CACNA1A-231ENST00000636816 NCAPD2Q15021 1401 aa20.28■□□□□ 0.84
CACNA1A-231ENST00000636816 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-231ENST00000636816 ITPRIPQ8IWB1 547 aa20.27■□□□□ 0.84
CACNA1A-231ENST00000636816 LGR6Q9HBX8 967 aa20.27■□□□□ 0.84
CACNA1A-231ENST00000636816 KIAA0232Q92628 1395 aa20.27■□□□□ 0.84
CACNA1A-231ENST00000636816 CAMTA1Q9Y6Y1 1673 aa20.26■□□□□ 0.83
CACNA1A-231ENST00000636816 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-231ENST00000636816 ZNF530Q6P9A1 599 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-231ENST00000636816 NLRP2Q9NX02 1062 aa20.24■□□□□ 0.83
CACNA1A-231ENST00000636816 AAMPQ13685 434 aa20.23■□□□□ 0.83
CACNA1A-231ENST00000636816 TAF7Q15545 349 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-231ENST00000636816 ARHGAP45Q92619 1136 aa20.23■□□□□ 0.83
CACNA1A-231ENST00000636816 DDX19BQ9UMR2 479 aa20.23■□□□□ 0.83
CACNA1A-231ENST00000636816 LMO7Q8WWI1 1683 aa20.22■□□□□ 0.83
CACNA1A-231ENST00000636816 MPRIPQ6WCQ1 1025 aa20.22■□□□□ 0.83
CACNA1A-231ENST00000636816 CEMIPQ8WUJ3 1361 aa20.22■□□□□ 0.83
CACNA1A-231ENST00000636816 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
CACNA1A-231ENST00000636816 AKAP4Q5JQC9 854 aa20.21■□□□□ 0.83
CACNA1A-231ENST00000636816 CPDO75976 1380 aa20.2■□□□□ 0.82
CACNA1A-231ENST00000636816 CSB-PGBD3P0DP91 1061 aa20.2■□□□□ 0.82
CACNA1A-231ENST00000636816 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-231ENST00000636816 ZBTB40Q9NUA8 1239 aa20.19■□□□□ 0.82
CACNA1A-231ENST00000636816 FAM208AQ9UK61 1670 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-231ENST00000636816 NHSL1Q5SYE7 1610 aa20.18■□□□□ 0.82
CACNA1A-231ENST00000636816 ABCC4O15439 1325 aa20.18■□□□□ 0.82
CACNA1A-231ENST00000636816 SLC4A2P04920 1241 aa20.17■□□□□ 0.82
CACNA1A-231ENST00000636816 HAP1P54257 671 aaPredicted RBP20.17■□□□□ 0.82
CACNA1A-231ENST00000636816 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
CACNA1A-231ENST00000636816 ZBTB7BO15156 539 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 RNMTO43148 476 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 KCNQ3O43525 872 aa20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 G2E3Q7L622 706 aa20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 RAPGEF4Q8WZA2 1011 aa20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 API5Q9BZZ5 524 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 PRDM11Q9NQV5 511 aa20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
CACNA1A-231ENST00000636816 NECTIN2Q92692 538 aa20.15■□□□□ 0.82
CACNA1A-231ENST00000636816 RGS3P49796 1198 aa20.15■□□□□ 0.82
CACNA1A-231ENST00000636816 ABCA3Q99758 1704 aa20.15■□□□□ 0.82
CACNA1A-231ENST00000636816 MEGF6O75095 1541 aa20.14■□□□□ 0.82
CACNA1A-231ENST00000636816 TEFQ10587 303 aa20.14■□□□□ 0.81
CACNA1A-231ENST00000636816 RWDD1Q9H446 243 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-231ENST00000636816 RGS12O14924 1447 aa20.14■□□□□ 0.81
CACNA1A-231ENST00000636816 ABCC6O95255 1503 aa20.14■□□□□ 0.81
CACNA1A-231ENST00000636816 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.81
CACNA1A-231ENST00000636816 KDM3BQ7LBC6 1761 aa20.12■□□□□ 0.81
CACNA1A-231ENST00000636816 LTBP4Q8N2S1 1624 aa20.12■□□□□ 0.81
CACNA1A-231ENST00000636816 BTBD11A6QL63 1104 aa20.12■□□□□ 0.81
CACNA1A-231ENST00000636816 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-231ENST00000636816 C1orf115Q9H7X2 142 aa20.12■□□□□ 0.81
CACNA1A-231ENST00000636816 PDE4AP27815 886 aa20.11■□□□□ 0.81
CACNA1A-231ENST00000636816 CCDC30Q5VVM6 783 aa20.1■□□□□ 0.81
CACNA1A-231ENST00000636816 PTPRCP08575 1304 aa20.1■□□□□ 0.81
CACNA1A-231ENST00000636816 ROBO1Q9Y6N7 1651 aa20.09■□□□□ 0.81
CACNA1A-231ENST00000636816 HDAC1Q13547 482 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-231ENST00000636816 INTS3Q68E01 1043 aaKnown RBP20.09■□□□□ 0.81
CACNA1A-231ENST00000636816 PDZRN3Q9UPQ7 1066 aa20.09■□□□□ 0.81
CACNA1A-231ENST00000636816 F6X3S4 739 aa20.08■□□□□ 0.81
CACNA1A-231ENST00000636816 PHKG2P15735 406 aa20.08■□□□□ 0.81
CACNA1A-231ENST00000636816 STK31Q9BXU1 1019 aa20.08■□□□□ 0.81
CACNA1A-231ENST00000636816 SPG7Q9UQ90 795 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms