RNA–Protein interactions for RNA: ENST00000636143.1

MEF2C-238, Transcript of myocyte enhancer factor 2C, human

TSL 5

Gene MEF2C, Length 2,247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEF2C-238	ENST00000636143	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	12.77	□□□□□ -0.36
MEF2C-238	ENST00000636143	ATP6V1A	P38606	617 aa		12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	PLA2G4A	P47712	749 aa		12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	NUCB1	Q02818	461 aa		12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	MCTP2	Q6DN12	878 aa		12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	C16orf45	Q96MC5	204 aa	Predicted RBP	12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	DMRT2	Q9Y5R5	561 aa		12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	ANKRD50	Q9ULJ7	1429 aa		12.77	□□□□□ -0.37
MEF2C-238	ENST00000636143	LAMC1	P11047	1609 aa		12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	PPP1R12A	O14974	1030 aa	Predicted RBP	12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	ZNF215	Q9UL58	517 aa	Predicted RBP	12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	GPRASP1	Q5JY77	1395 aa		12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	SART3	Q15020	963 aa	Known RBP	12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	DNAJC21	Q5F1R6	531 aa	Known RBP	12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	UBXN6	Q9BZV1	441 aa		12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	PSD3	Q9NYI0	1048 aa		12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	TNN	Q9UQP3	1299 aa		12.76	□□□□□ -0.37
MEF2C-238	ENST00000636143	CCDC196	A0A1B0GTZ2	297 aa		12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	CLSTN1	O94985	981 aa		12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	PNMA6A	P0CW24	399 aa	Predicted RBP	12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	CCDC183	Q5T5S1	534 aa		12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	GTF3C6	Q969F1	213 aa		12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	BSDC1	Q9NW68	430 aa	Predicted RBP	12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	KIAA0586	Q9BVV6	1533 aa		12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	DNMT1	P26358	1616 aa	Known RBP	12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	DAPK1	P53355	1430 aa		12.75	□□□□□ -0.37
MEF2C-238	ENST00000636143	KIF3C	O14782	793 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	CALR	P27797	417 aa	Known RBP	12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	SEMA3F	Q13275	785 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	ELF2	Q15723	593 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	NBPF9	Q3BBW0	867 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	TBC1D9	Q6ZT07	1266 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	NBPF11	Q86T75	865 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	ERBB3	P21860	1342 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	TRPM1	Q7Z4N2	1603 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	ATP10A	O60312	1499 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	HCLS1	P14317	486 aa	Predicted RBP	12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	CEP135	Q66GS9	1140 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	NBPF10	Q6P3W6	841 aa	Known RBP	12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	SMARCE1	Q969G3	411 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	KNSTRN	Q9Y448	316 aa		12.74	□□□□□ -0.37
MEF2C-238	ENST00000636143	ATP8B1	O43520	1251 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	BRD1	O95696	1058 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	CP	P00450	1065 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	LRCH2	Q5VUJ6	765 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	CCDC146	Q8IYE0	955 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	PPM1E	Q8WY54	764 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	RTF1	Q92541	710 aa	Known RBP	12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	URB2	Q14146	1524 aa	Known RBP	12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	MAGI3	Q5TCQ9	1506 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	AP5Z1	O43299	807 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	MAP2K2	P36507	400 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	ZGPAT	Q8N5A5	531 aa	Known RBP	12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	STK26	Q9P289	416 aa		12.73	□□□□□ -0.37
MEF2C-238	ENST00000636143	ZRANB2	O95218	330 aa	Known RBP eCLIP	12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	C11orf91	Q3C1V1	193 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	MMS22L	Q6ZRQ5	1243 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	ANKRD20A12P	Q8NF67	263 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	IFT57	Q9NWB7	429 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	DISP3	Q9P2K9	1392 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	SLU7	O95391	586 aa	Known RBP	12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	IVL	P07476	585 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	PTGS1	P23219	599 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	AK7	Q96M32	723 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	CCDC171	Q6TFL3	1326 aa		12.72	□□□□□ -0.37
MEF2C-238	ENST00000636143	MX1	P20591	662 aa		12.71	□□□□□ -0.37
MEF2C-238	ENST00000636143	ST5	P78524	1137 aa		12.71	□□□□□ -0.37
MEF2C-238	ENST00000636143	JMY	Q8N9B5	988 aa		12.71	□□□□□ -0.37
MEF2C-238	ENST00000636143	FUCA2	Q9BTY2	467 aa		12.71	□□□□□ -0.37
MEF2C-238	ENST00000636143	CCDC141	Q6ZP82	1450 aa		12.71	□□□□□ -0.38
MEF2C-238	ENST00000636143	ATAD2	Q6PL18	1390 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	ST18	O60284	1047 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	CHD1L	Q86WJ1	897 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	DZIP1L	Q8IYY4	767 aa	Known RBP	12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	TMEM87A	Q8NBN3	555 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	EXOC4	Q96A65	974 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	CHAMP1	Q96JM3	812 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	TESK2	Q96S53	571 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	TTC36	A6NLP5	189 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	SSR1	P43307	286 aa	Known RBP	12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	CLCN6	P51797	869 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	ZKSCAN8	Q15776	578 aa	Predicted RBP	12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	TPD52L1	Q16890	204 aa	Predicted RBP	12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	ZKSCAN2	Q63HK3	967 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	SPC24	Q8NBT2	197 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	DDX19B	Q9UMR2	479 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	CLTCL1	P53675	1640 aa		12.7	□□□□□ -0.38
MEF2C-238	ENST00000636143	ABCC5	O15440	1437 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	ERBIN	Q96RT1	1412 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	CDC45	O75419	566 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	E2F4	Q16254	413 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	TACO1	Q9BSH4	297 aa	Known RBP	12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	PRDM15	P57071	1507 aa	Predicted RBP	12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	MRC2	Q9UBG0	1479 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	ITSN2	Q9NZM3	1697 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	KLHL33	A6NCF5	533 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	RPS6KA5	O75582	802 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	ACTN2	P35609	894 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	NYAP1	Q6ZVC0	841 aa		12.69	□□□□□ -0.38
MEF2C-238	ENST00000636143	TBC1D22A	Q8WUA7	517 aa		12.69	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms