RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 SYTL4Q96C24 671 aaPredicted RBP20.26■□□□□ 0.83
HSPG2-214ENST00000635682 PRIM1P49642 420 aaKnown RBP20.25■□□□□ 0.83
HSPG2-214ENST00000635682 ZNF827Q17R98 1081 aa20.25■□□□□ 0.83
HSPG2-214ENST00000635682 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
HSPG2-214ENST00000635682 ZCRB1Q8TBF4 217 aaKnown RBP20.25■□□□□ 0.83
HSPG2-214ENST00000635682 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
HSPG2-214ENST00000635682 PANK3Q9H999 370 aa20.25■□□□□ 0.83
HSPG2-214ENST00000635682 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
HSPG2-214ENST00000635682 KIF7Q2M1P5 1343 aa20.25■□□□□ 0.83
HSPG2-214ENST00000635682 KCNQ4P56696 695 aa20.24■□□□□ 0.83
HSPG2-214ENST00000635682 MTFR1LQ9H019 292 aa20.24■□□□□ 0.83
HSPG2-214ENST00000635682 CARD14Q9BXL6 1004 aa20.22■□□□□ 0.83
HSPG2-214ENST00000635682 FHDC1Q9C0D6 1143 aaPredicted RBP20.22■□□□□ 0.83
HSPG2-214ENST00000635682 PAPPAQ13219 1627 aa20.22■□□□□ 0.83
HSPG2-214ENST00000635682 MEGF6O75095 1541 aa20.22■□□□□ 0.83
HSPG2-214ENST00000635682 KIF20BQ96Q89 1820 aa20.21■□□□□ 0.83
HSPG2-214ENST00000635682 HSP90AB2PQ58FF8 381 aa20.21■□□□□ 0.83
HSPG2-214ENST00000635682 SGIP1Q9BQI5 828 aa20.21■□□□□ 0.83
HSPG2-214ENST00000635682 RTL1A6NKG5 1358 aa20.21■□□□□ 0.83
HSPG2-214ENST00000635682 AKT1S1Q96B36 256 aa20.2■□□□□ 0.82
HSPG2-214ENST00000635682 SYT17Q9BSW7 474 aa20.2■□□□□ 0.82
HSPG2-214ENST00000635682 SLC27A3Q5K4L6 730 aa20.19■□□□□ 0.82
HSPG2-214ENST00000635682 DOT1LQ8TEK3 1739 aa20.19■□□□□ 0.82
HSPG2-214ENST00000635682 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
HSPG2-214ENST00000635682 RAPGEF4Q8WZA2 1011 aa20.18■□□□□ 0.82
HSPG2-214ENST00000635682 ARXQ96QS3 562 aa20.17■□□□□ 0.82
HSPG2-214ENST00000635682 NSD2O96028 1365 aa20.17■□□□□ 0.82
HSPG2-214ENST00000635682 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
HSPG2-214ENST00000635682 SMG6Q86US8 1419 aaKnown RBP20.16■□□□□ 0.82
HSPG2-214ENST00000635682 TFCP2L1Q9NZI6 479 aa20.15■□□□□ 0.82
HSPG2-214ENST00000635682 EMILIN1Q9Y6C2 1016 aa20.15■□□□□ 0.82
HSPG2-214ENST00000635682 INSRP06213 1382 aa20.15■□□□□ 0.82
HSPG2-214ENST00000635682 PNPLA7Q6ZV29 1317 aa20.14■□□□□ 0.81
HSPG2-214ENST00000635682 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-214ENST00000635682 MORC1Q86VD1 984 aa20.14■□□□□ 0.81
HSPG2-214ENST00000635682 FLT4P35916 1363 aa20.13■□□□□ 0.81
HSPG2-214ENST00000635682 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
HSPG2-214ENST00000635682 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-214ENST00000635682 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
HSPG2-214ENST00000635682 LY75O60449 1722 aa20.11■□□□□ 0.81
HSPG2-214ENST00000635682 KLHL34Q8N239 644 aa20.11■□□□□ 0.81
HSPG2-214ENST00000635682 TUBGCP6Q96RT7 1819 aa20.11■□□□□ 0.81
HSPG2-214ENST00000635682 SLC16A10Q8TF71 515 aa20.1■□□□□ 0.81
HSPG2-214ENST00000635682 KIF24Q5T7B8 1368 aa20.09■□□□□ 0.81
HSPG2-214ENST00000635682 PCDH11XQ9BZA7 1347 aa20.08■□□□□ 0.81
HSPG2-214ENST00000635682 PCDH11YQ9BZA8 1340 aa20.08■□□□□ 0.81
HSPG2-214ENST00000635682 QSER1Q2KHR3 1735 aa20.08■□□□□ 0.81
HSPG2-214ENST00000635682 CYP27B1O15528 508 aa20.08■□□□□ 0.81
HSPG2-214ENST00000635682 MSH5O43196 834 aa20.08■□□□□ 0.81
HSPG2-214ENST00000635682 MPRIPQ6WCQ1 1025 aa20.08■□□□□ 0.81
HSPG2-214ENST00000635682 UTRNP46939 3433 aa20.07■□□□□ 0.8
HSPG2-214ENST00000635682 MAP2P11137 1827 aaKnown RBP20.07■□□□□ 0.8
HSPG2-214ENST00000635682 POLD1P28340 1107 aa20.07■□□□□ 0.8
HSPG2-214ENST00000635682 CNGB1Q14028 1251 aaPredicted RBP20.07■□□□□ 0.8
HSPG2-214ENST00000635682 ANKRD26Q9UPS8 1709 aa20.05■□□□□ 0.8
HSPG2-214ENST00000635682 CC2D1BQ5T0F9 858 aaKnown RBP20.05■□□□□ 0.8
HSPG2-214ENST00000635682 COL23A1Q86Y22 540 aaPredicted RBP20.05■□□□□ 0.8
HSPG2-214ENST00000635682 GPR162Q16538 588 aa20.04■□□□□ 0.8
HSPG2-214ENST00000635682 EYA1Q99502 592 aa20.04■□□□□ 0.8
HSPG2-214ENST00000635682 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
HSPG2-214ENST00000635682 MAP3K5Q99683 1374 aa20.04■□□□□ 0.8
HSPG2-214ENST00000635682 ITGB4P16144 1822 aa20.02■□□□□ 0.8
HSPG2-214ENST00000635682 MSL1Q68DK7 614 aa20.02■□□□□ 0.8
HSPG2-214ENST00000635682 PELP1Q8IZL8 1130 aaKnown RBP20.02■□□□□ 0.8
HSPG2-214ENST00000635682 PALLDQ8WX93 1383 aa20.02■□□□□ 0.8
HSPG2-214ENST00000635682 COL24A1Q17RW2 1714 aa20.02■□□□□ 0.79
HSPG2-214ENST00000635682 AMER1Q5JTC6 1135 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-214ENST00000635682 ZNF784Q8NCA9 323 aaPredicted RBP20.01■□□□□ 0.79
HSPG2-214ENST00000635682 NLGN2Q8NFZ4 835 aa20.01■□□□□ 0.79
HSPG2-214ENST00000635682 PIGBQ92521 554 aa20.01■□□□□ 0.79
HSPG2-214ENST00000635682 SPG7Q9UQ90 795 aa20.01■□□□□ 0.79
HSPG2-214ENST00000635682 CHD4Q14839 1912 aa20.01■□□□□ 0.79
HSPG2-214ENST00000635682 TOGARAM1Q9Y4F4 1720 aa20■□□□□ 0.79
HSPG2-214ENST00000635682 PKD1L3Q7Z443 1732 aa19.99■□□□□ 0.79
HSPG2-214ENST00000635682 C5P01031 1676 aa19.99■□□□□ 0.79
HSPG2-214ENST00000635682 NCAPD2Q15021 1401 aa19.99■□□□□ 0.79
HSPG2-214ENST00000635682 TAF1LQ8IZX4 1826 aa19.98■□□□□ 0.79
HSPG2-214ENST00000635682 PER1O15534 1290 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-214ENST00000635682 NKX1-1Q15270 411 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-214ENST00000635682 SMIM5Q71RC9 77 aa19.98■□□□□ 0.79
HSPG2-214ENST00000635682 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
HSPG2-214ENST00000635682 EIF4A2Q14240 407 aaKnown RBP19.97■□□□□ 0.79
HSPG2-214ENST00000635682 NPC1L1Q9UHC9 1359 aa19.96■□□□□ 0.79
HSPG2-214ENST00000635682 AMIGO3Q86WK7 504 aa19.95■□□□□ 0.78
HSPG2-214ENST00000635682 PHKG2P15735 406 aa19.94■□□□□ 0.78
HSPG2-214ENST00000635682 IFNL2Q8IZJ0 200 aa19.94■□□□□ 0.78
HSPG2-214ENST00000635682 AK7Q96M32 723 aa19.94■□□□□ 0.78
HSPG2-214ENST00000635682 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.94■□□□□ 0.78
HSPG2-214ENST00000635682 TMOD3Q9NYL9 352 aa19.94■□□□□ 0.78
HSPG2-214ENST00000635682 ASAP1Q9ULH1 1129 aa19.94■□□□□ 0.78
HSPG2-214ENST00000635682 PHF14O94880 888 aa19.93■□□□□ 0.78
HSPG2-214ENST00000635682 FLAD1Q8NFF5 587 aa19.93■□□□□ 0.78
HSPG2-214ENST00000635682 GOLGB1Q14789 3259 aaKnown RBP19.92■□□□□ 0.78
HSPG2-214ENST00000635682 LOC102724428A0A0B4J2F2 783 aa19.92■□□□□ 0.78
HSPG2-214ENST00000635682 SIK1P57059 783 aa19.92■□□□□ 0.78
HSPG2-214ENST00000635682 C4BP0C0L5 1744 aa19.92■□□□□ 0.78
HSPG2-214ENST00000635682 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
HSPG2-214ENST00000635682 LINC00116Q8NCU8 138 aa19.91■□□□□ 0.78
HSPG2-214ENST00000635682 CFAP53Q96M91 514 aa19.91■□□□□ 0.78
HSPG2-214ENST00000635682 YBX3P16989 372 aaKnown RBP eCLIP19.9■□□□□ 0.783e-8■□□□□ 8.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms