RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
PTPN11-206ENST00000635652 RAPGEF4Q8WZA2 1011 aa17.51■□□□□ 0.39
PTPN11-206ENST00000635652 LRRC4BQ9NT99 713 aa17.5■□□□□ 0.39
PTPN11-206ENST00000635652 MEGF6O75095 1541 aa17.5■□□□□ 0.39
PTPN11-206ENST00000635652 NSD3Q9BZ95 1437 aa17.49■□□□□ 0.39
PTPN11-206ENST00000635652 PTGER2P43116 358 aa17.49■□□□□ 0.39
PTPN11-206ENST00000635652 MTFR1LQ9H019 292 aa17.49■□□□□ 0.39
PTPN11-206ENST00000635652 MYOM1P52179 1685 aa17.48■□□□□ 0.39
PTPN11-206ENST00000635652 PPM1GO15355 546 aaPredicted RBP17.48■□□□□ 0.39
PTPN11-206ENST00000635652 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
PTPN11-206ENST00000635652 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
PTPN11-206ENST00000635652 INSRP06213 1382 aa17.48■□□□□ 0.39
PTPN11-206ENST00000635652 FLT4P35916 1363 aa17.48■□□□□ 0.39
PTPN11-206ENST00000635652 CGNL1Q0VF96 1302 aa17.47■□□□□ 0.39
PTPN11-206ENST00000635652 ZNF827Q17R98 1081 aa17.47■□□□□ 0.39
PTPN11-206ENST00000635652 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
PTPN11-206ENST00000635652 SHANK3Q9BYB0 1731 aa17.47■□□□□ 0.39
PTPN11-206ENST00000635652 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
PTPN11-206ENST00000635652 KCNQ4P56696 695 aa17.46■□□□□ 0.39
PTPN11-206ENST00000635652 EMILIN1Q9Y6C2 1016 aa17.46■□□□□ 0.39
PTPN11-206ENST00000635652 PAPPAQ13219 1627 aa17.46■□□□□ 0.39
PTPN11-206ENST00000635652 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
PTPN11-206ENST00000635652 YY1P25490 414 aa17.44■□□□□ 0.38
PTPN11-206ENST00000635652 GOLGB1Q14789 3259 aaKnown RBP17.43■□□□□ 0.38
PTPN11-206ENST00000635652 AKT1S1Q96B36 256 aa17.43■□□□□ 0.38
PTPN11-206ENST00000635652 FHDC1Q9C0D6 1143 aaPredicted RBP17.43■□□□□ 0.38
PTPN11-206ENST00000635652 TFCP2L1Q9NZI6 479 aa17.43■□□□□ 0.38
PTPN11-206ENST00000635652 MAP2P11137 1827 aaKnown RBP17.42■□□□□ 0.38
PTPN11-206ENST00000635652 NSD2O96028 1365 aa17.42■□□□□ 0.38
PTPN11-206ENST00000635652 EIF4G2P78344 907 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPN11-206ENST00000635652 ARXQ96QS3 562 aa17.42■□□□□ 0.38
PTPN11-206ENST00000635652 SYT17Q9BSW7 474 aa17.42■□□□□ 0.38
PTPN11-206ENST00000635652 CCNL1Q9UK58 526 aaPredicted RBP17.42■□□□□ 0.38
PTPN11-206ENST00000635652 PCDH11XQ9BZA7 1347 aa17.42■□□□□ 0.38
PTPN11-206ENST00000635652 PCDH11YQ9BZA8 1340 aa17.42■□□□□ 0.38
PTPN11-206ENST00000635652 SGIP1Q9BQI5 828 aa17.41■□□□□ 0.38
PTPN11-206ENST00000635652 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
PTPN11-206ENST00000635652 TNNT2P45379 298 aaPredicted RBP17.4■□□□□ 0.38
PTPN11-206ENST00000635652 LY75O60449 1722 aa17.4■□□□□ 0.38
PTPN11-206ENST00000635652 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
PTPN11-206ENST00000635652 SLC16A10Q8TF71 515 aa17.39■□□□□ 0.37
PTPN11-206ENST00000635652 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
PTPN11-206ENST00000635652 PNPLA7Q6ZV29 1317 aa17.39■□□□□ 0.37
PTPN11-206ENST00000635652 CYP27B1O15528 508 aa17.38■□□□□ 0.37
PTPN11-206ENST00000635652 MSH5O43196 834 aa17.37■□□□□ 0.37
PTPN11-206ENST00000635652 POLD1P28340 1107 aa17.37■□□□□ 0.37
PTPN11-206ENST00000635652 POLKQ9UBT6 870 aa17.37■□□□□ 0.37
PTPN11-206ENST00000635652 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
PTPN11-206ENST00000635652 QSER1Q2KHR3 1735 aa17.37■□□□□ 0.37
PTPN11-206ENST00000635652 TUBGCP6Q96RT7 1819 aa17.36■□□□□ 0.37
PTPN11-206ENST00000635652 KLHL34Q8N239 644 aa17.36■□□□□ 0.37
PTPN11-206ENST00000635652 EYA1Q99502 592 aa17.36■□□□□ 0.37
PTPN11-206ENST00000635652 PANK3Q9H999 370 aa17.36■□□□□ 0.37
PTPN11-206ENST00000635652 ANKRD26Q9UPS8 1709 aa17.35■□□□□ 0.37
PTPN11-206ENST00000635652 ITGB4P16144 1822 aa17.33■□□□□ 0.37
PTPN11-206ENST00000635652 PALLDQ8WX93 1383 aa17.33■□□□□ 0.36
PTPN11-206ENST00000635652 HMGB2P26583 209 aaKnown RBP17.33■□□□□ 0.36
PTPN11-206ENST00000635652 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.36
PTPN11-206ENST00000635652 EIF4A2Q14240 407 aaKnown RBP17.32■□□□□ 0.36
PTPN11-206ENST00000635652 SMARCC1Q92922 1105 aaPredicted RBP17.32■□□□□ 0.36
PTPN11-206ENST00000635652 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
PTPN11-206ENST00000635652 COL23A1Q86Y22 540 aaPredicted RBP17.31■□□□□ 0.36
PTPN11-206ENST00000635652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.362e-6■■□□□ 11.9
PTPN11-206ENST00000635652 C5P01031 1676 aa17.31■□□□□ 0.36
PTPN11-206ENST00000635652 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
PTPN11-206ENST00000635652 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
PTPN11-206ENST00000635652 NKX1-1Q15270 411 aaPredicted RBP17.3■□□□□ 0.36
PTPN11-206ENST00000635652 PIGBQ92521 554 aa17.3■□□□□ 0.36
PTPN11-206ENST00000635652 GPR162Q16538 588 aa17.29■□□□□ 0.36
PTPN11-206ENST00000635652 MORC1Q86VD1 984 aa17.29■□□□□ 0.36
PTPN11-206ENST00000635652 IFNL2Q8IZJ0 200 aa17.29■□□□□ 0.36
PTPN11-206ENST00000635652 TMOD3Q9NYL9 352 aa17.29■□□□□ 0.36
PTPN11-206ENST00000635652 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
PTPN11-206ENST00000635652 CHD4Q14839 1912 aa17.28■□□□□ 0.36
PTPN11-206ENST00000635652 PHKG2P15735 406 aa17.28■□□□□ 0.36
PTPN11-206ENST00000635652 COL24A1Q17RW2 1714 aa17.27■□□□□ 0.36
PTPN11-206ENST00000635652 MSL1Q68DK7 614 aa17.27■□□□□ 0.36
PTPN11-206ENST00000635652 PELP1Q8IZL8 1130 aaKnown RBP17.27■□□□□ 0.36
PTPN11-206ENST00000635652 FLAD1Q8NFF5 587 aa17.27■□□□□ 0.36
PTPN11-206ENST00000635652 AK7Q96M32 723 aa17.27■□□□□ 0.36
PTPN11-206ENST00000635652 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
PTPN11-206ENST00000635652 LOC102724428A0A0B4J2F2 783 aa17.24■□□□□ 0.35
PTPN11-206ENST00000635652 PHF14O94880 888 aa17.24■□□□□ 0.35
PTPN11-206ENST00000635652 SIK1P57059 783 aa17.24■□□□□ 0.35
PTPN11-206ENST00000635652 NLGN2Q8NFZ4 835 aa17.24■□□□□ 0.35
PTPN11-206ENST00000635652 ASAP1Q9ULH1 1129 aa17.24■□□□□ 0.35
PTPN11-206ENST00000635652 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
PTPN11-206ENST00000635652 IGSF1Q8N6C5 1336 aa17.23■□□□□ 0.35
PTPN11-206ENST00000635652 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
PTPN11-206ENST00000635652 ATP6V1AP38606 617 aa17.22■□□□□ 0.35
PTPN11-206ENST00000635652 SMIM5Q71RC9 77 aa17.22■□□□□ 0.35
PTPN11-206ENST00000635652 ZNF784Q8NCA9 323 aaPredicted RBP17.22■□□□□ 0.35
PTPN11-206ENST00000635652 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
PTPN11-206ENST00000635652 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
PTPN11-206ENST00000635652 AMIGO3Q86WK7 504 aa17.21■□□□□ 0.35
PTPN11-206ENST00000635652 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
PTPN11-206ENST00000635652 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
PTPN11-206ENST00000635652 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
PTPN11-206ENST00000635652 AMOTQ4VCS5 1084 aa17.2■□□□□ 0.34
PTPN11-206ENST00000635652 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms