RNA–Protein interactions for RNA: ENST00000635556.1

LINC01646-203, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 5

Gene LINC01646, Length 914 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-203ENST00000635556 BCL9LQ86UU0 1499 aa12.89□□□□□ -0.35
LINC01646-203ENST00000635556 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
LINC01646-203ENST00000635556 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
LINC01646-203ENST00000635556 STRN4Q9NRL3 753 aa12.88□□□□□ -0.35
LINC01646-203ENST00000635556 SHANK3Q9BYB0 1731 aa12.88□□□□□ -0.35
LINC01646-203ENST00000635556 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
LINC01646-203ENST00000635556 EVA1CP58658 441 aa12.87□□□□□ -0.35
LINC01646-203ENST00000635556 PDE3BQ13370 1112 aa12.87□□□□□ -0.35
LINC01646-203ENST00000635556 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
LINC01646-203ENST00000635556 MAP3K5Q99683 1374 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 LMOD3Q0VAK6 560 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 MTHFSDQ2M296 383 aaKnown RBP12.86□□□□□ -0.35
LINC01646-203ENST00000635556 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 C8orf37Q96NL8 207 aa12.86□□□□□ -0.35
LINC01646-203ENST00000635556 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINC01646-203ENST00000635556 CENPBP07199 599 aaPredicted RBP12.85□□□□□ -0.35
LINC01646-203ENST00000635556 TATP17735 454 aaPredicted RBP12.85□□□□□ -0.35
LINC01646-203ENST00000635556 RIPK4P57078 832 aa12.85□□□□□ -0.35
LINC01646-203ENST00000635556 UNC5CLQ8IV45 518 aa12.85□□□□□ -0.35
LINC01646-203ENST00000635556 TRIM35Q9UPQ4 493 aa12.85□□□□□ -0.35
LINC01646-203ENST00000635556 SPATA31A1Q5TZJ5 1347 aa12.85□□□□□ -0.35
LINC01646-203ENST00000635556 SPATA31A5Q5VU36 1347 aa12.85□□□□□ -0.35
LINC01646-203ENST00000635556 SPATA31A7Q8IWB4 1347 aa12.85□□□□□ -0.35
LINC01646-203ENST00000635556 NEUROD2Q15784 382 aa12.84□□□□□ -0.35
LINC01646-203ENST00000635556 PLEKHO1Q53GL0 409 aaPredicted RBP12.84□□□□□ -0.35
LINC01646-203ENST00000635556 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
LINC01646-203ENST00000635556 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
LINC01646-203ENST00000635556 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
LINC01646-203ENST00000635556 TNS2Q63HR2 1409 aa12.84□□□□□ -0.35
LINC01646-203ENST00000635556 ATRNO75882 1429 aa12.83□□□□□ -0.36
LINC01646-203ENST00000635556 HTATSF1O43719 755 aaKnown RBP12.83□□□□□ -0.36
LINC01646-203ENST00000635556 IL2RBP14784 551 aa12.83□□□□□ -0.36
LINC01646-203ENST00000635556 VPS72Q15906 364 aa12.83□□□□□ -0.36
LINC01646-203ENST00000635556 WDR63Q8IWG1 891 aa12.83□□□□□ -0.36
LINC01646-203ENST00000635556 THRAP3Q9Y2W1 955 aaKnown RBP12.83□□□□□ -0.36
LINC01646-203ENST00000635556 IL16Q14005 1332 aa12.83□□□□□ -0.36
LINC01646-203ENST00000635556 THSD7AQ9UPZ6 1657 aa12.83□□□□□ -0.36
LINC01646-203ENST00000635556 GLI3P10071 1580 aa12.82□□□□□ -0.36
LINC01646-203ENST00000635556 GOLGA2Q08379 1002 aa12.82□□□□□ -0.36
LINC01646-203ENST00000635556 MRC1P22897 1456 aa12.82□□□□□ -0.36
LINC01646-203ENST00000635556 AFF2P51816 1311 aa12.82□□□□□ -0.36
LINC01646-203ENST00000635556 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 VIRMAQ69YN4 1812 aaKnown RBP12.81□□□□□ -0.36
LINC01646-203ENST00000635556 CALD1Q05682 793 aaKnown RBP12.81□□□□□ -0.36
LINC01646-203ENST00000635556 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 ZNF530Q6P9A1 599 aaPredicted RBP12.81□□□□□ -0.36
LINC01646-203ENST00000635556 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 CDCA7Q9BWT1 371 aaPredicted RBP12.81□□□□□ -0.36
LINC01646-203ENST00000635556 USP21Q9UK80 565 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 SCN11AQ9UI33 1791 aa12.81□□□□□ -0.36
LINC01646-203ENST00000635556 GNAT3A8MTJ3 354 aa12.8□□□□□ -0.36
LINC01646-203ENST00000635556 E9PSI1 815 aa12.8□□□□□ -0.36
LINC01646-203ENST00000635556 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
LINC01646-203ENST00000635556 SIPA1L3O60292 1781 aaPredicted RBP12.79□□□□□ -0.36
LINC01646-203ENST00000635556 SLFN5Q08AF3 891 aa12.79□□□□□ -0.36
LINC01646-203ENST00000635556 C1orf141Q5JVX7 400 aa12.79□□□□□ -0.36
LINC01646-203ENST00000635556 TRMT2AQ8IZ69 625 aaKnown RBP12.79□□□□□ -0.36
LINC01646-203ENST00000635556 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
LINC01646-203ENST00000635556 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
LINC01646-203ENST00000635556 USP35Q9P2H5 1018 aa12.79□□□□□ -0.36
LINC01646-203ENST00000635556 PHKG2P15735 406 aa12.78□□□□□ -0.36
LINC01646-203ENST00000635556 DUSP27Q5VZP5 1158 aa12.78□□□□□ -0.36
LINC01646-203ENST00000635556 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
LINC01646-203ENST00000635556 SPINK5Q9NQ38 1064 aaPredicted RBP12.78□□□□□ -0.36
LINC01646-203ENST00000635556 IFT57Q9NWB7 429 aa12.78□□□□□ -0.36
LINC01646-203ENST00000635556 TOGARAM1Q9Y4F4 1720 aa12.78□□□□□ -0.36
LINC01646-203ENST00000635556 KDM3BQ7LBC6 1761 aa12.77□□□□□ -0.36
LINC01646-203ENST00000635556 CYP27B1O15528 508 aa12.77□□□□□ -0.37
LINC01646-203ENST00000635556 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
LINC01646-203ENST00000635556 MCM10Q7L590 875 aa12.77□□□□□ -0.37
LINC01646-203ENST00000635556 IFNL2Q8IZJ0 200 aa12.77□□□□□ -0.37
LINC01646-203ENST00000635556 THUMPD2Q9BTF0 503 aaKnown RBP12.77□□□□□ -0.37
LINC01646-203ENST00000635556 TRPC5Q9UL62 973 aaPredicted RBP12.77□□□□□ -0.37
LINC01646-203ENST00000635556 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
LINC01646-203ENST00000635556 ZNF853P0CG23 659 aa12.76□□□□□ -0.37
LINC01646-203ENST00000635556 DCTN1Q14203 1278 aa12.76□□□□□ -0.37
LINC01646-203ENST00000635556 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
LINC01646-203ENST00000635556 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
LINC01646-203ENST00000635556 CCDC9Q9Y3X0 531 aaKnown RBP12.76□□□□□ -0.37
LINC01646-203ENST00000635556 FANCIQ9NVI1 1328 aa12.76□□□□□ -0.37
LINC01646-203ENST00000635556 GNAI1P63096 354 aa12.75□□□□□ -0.37
LINC01646-203ENST00000635556 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
LINC01646-203ENST00000635556 PAPPAQ13219 1627 aa12.74□□□□□ -0.37
LINC01646-203ENST00000635556 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
LINC01646-203ENST00000635556 NKX1-1Q15270 411 aaPredicted RBP12.74□□□□□ -0.37
LINC01646-203ENST00000635556 DCAF5Q96JK2 942 aa12.74□□□□□ -0.37
LINC01646-203ENST00000635556 GJD4Q96KN9 370 aaPredicted RBP12.74□□□□□ -0.37
LINC01646-203ENST00000635556 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
LINC01646-203ENST00000635556 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
LINC01646-203ENST00000635556 MPRIPQ6WCQ1 1025 aa12.73□□□□□ -0.37
LINC01646-203ENST00000635556 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
LINC01646-203ENST00000635556 CHL1O00533 1208 aa12.72□□□□□ -0.37
LINC01646-203ENST00000635556 DDB1Q16531 1140 aa12.72□□□□□ -0.37
LINC01646-203ENST00000635556 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms