RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 TXLNAP40222 546 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 NCOA1Q15788 1441 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 DYDC1Q8WWB3 177 aa13.74□□□□□ -0.21
COL11A1-211ENST00000635193 POLR3GO15318 223 aaPredicted RBP13.73□□□□□ -0.21
COL11A1-211ENST00000635193 FCHSD2O94868 740 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 CAMK4Q16566 473 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 IQCEQ6IPM2 695 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 PRIMPOLQ96LW4 560 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 MRC2Q9UBG0 1479 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 TOP2BQ02880 1626 aa13.73□□□□□ -0.21
COL11A1-211ENST00000635193 SRGAP3O43295 1099 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 CASTP20810 708 aaKnown RBP13.72□□□□□ -0.21
COL11A1-211ENST00000635193 FBXO3Q9UK99 471 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 SSH1Q8WYL5 1049 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 SIL1Q9H173 461 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 NSD3Q9BZ95 1437 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 TNNT1P13805 278 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 ODF2Q5BJF6 829 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 CDK19Q9BWU1 502 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 ANKRD30BQ9BXX2 1392 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 AACSQ86V21 672 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 CRACR2AQ9BSW2 395 aa13.72□□□□□ -0.21
COL11A1-211ENST00000635193 SMTNL1A8MU46 457 aa13.71□□□□□ -0.21
COL11A1-211ENST00000635193 DUSP27Q5VZP5 1158 aa13.71□□□□□ -0.21
COL11A1-211ENST00000635193 FAM107BQ9H098 131 aa13.71□□□□□ -0.21
COL11A1-211ENST00000635193 NLRP2Q9NX02 1062 aa13.71□□□□□ -0.21
COL11A1-211ENST00000635193 POLA1P09884 1462 aaPredicted RBP13.71□□□□□ -0.21
COL11A1-211ENST00000635193 SYTL4Q96C24 671 aaPredicted RBP13.71□□□□□ -0.21
COL11A1-211ENST00000635193 PLEKHO1Q53GL0 409 aaPredicted RBP13.71□□□□□ -0.21
COL11A1-211ENST00000635193 NFE2L2Q16236 605 aa13.71□□□□□ -0.22
COL11A1-211ENST00000635193 KRT32Q14532 448 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 CCDC158Q5M9N0 1113 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 TTC39AQ5SRH9 613 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 IPO4Q8TEX9 1081 aaKnown RBP13.7□□□□□ -0.22
COL11A1-211ENST00000635193 CCDC43Q96MW1 224 aaKnown RBP13.7□□□□□ -0.22
COL11A1-211ENST00000635193 TBC1D32Q96NH3 1257 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 EXOC6BQ9Y2D4 811 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 PRG4Q92954 1404 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-211ENST00000635193 TROQ12816 1431 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-211ENST00000635193 SFPQP23246 707 aaKnown RBP eCLIP13.7□□□□□ -0.22
COL11A1-211ENST00000635193 ALDH1L2Q3SY69 923 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 USP25Q9UHP3 1055 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 SYNJ2O15056 1496 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 FERMT3Q86UX7 667 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 MX1P20591 662 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 TRIM22Q8IYM9 498 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 C16orf45Q96MC5 204 aaPredicted RBP13.7□□□□□ -0.22
COL11A1-211ENST00000635193 MTMR7Q9Y216 660 aa13.7□□□□□ -0.22
COL11A1-211ENST00000635193 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
COL11A1-211ENST00000635193 SMARCA5O60264 1052 aaPredicted RBP13.69□□□□□ -0.22
COL11A1-211ENST00000635193 DDX11Q96FC9 970 aa13.69□□□□□ -0.22
COL11A1-211ENST00000635193 NUTM1Q86Y26 1132 aa13.69□□□□□ -0.22
COL11A1-211ENST00000635193 LRRFIP2Q9Y608 721 aaKnown RBP13.69□□□□□ -0.22
COL11A1-211ENST00000635193 LUC7LQ9NQ29 371 aaKnown RBP13.69□□□□□ -0.22
COL11A1-211ENST00000635193 URI1O94763 535 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-211ENST00000635193 IBSPP21815 317 aaPredicted RBP13.68□□□□□ -0.22
COL11A1-211ENST00000635193 ARHGAP29Q52LW3 1261 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.68□□□□□ -0.22
COL11A1-211ENST00000635193 ZSCAN12O43309 604 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 ABTB2Q8N961 1025 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 CDK5RAP3Q96JB5 506 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 IGHDP01880 384 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 TXLNBQ8N3L3 684 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 BAG4O95429 457 aaKnown RBP13.68□□□□□ -0.22
COL11A1-211ENST00000635193 ENOX2Q16206 610 aaKnown RBP13.68□□□□□ -0.22
COL11A1-211ENST00000635193 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
COL11A1-211ENST00000635193 XRCC6P12956 609 aaKnown RBP eCLIP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 STIM1Q13586 685 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 BMS1Q14692 1282 aaKnown RBP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 SCAND2PQ9GZW5 306 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 TOPBP1Q92547 1522 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 KLHL40Q2TBA0 621 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 NEFHP12036 1026 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 ZFYVE27Q5T4F4 411 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 STK11IPQ8N1F8 1099 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
COL11A1-211ENST00000635193 GRIN2BQ13224 1484 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 MAP9Q49MG5 647 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 JAKMIP3Q5VZ66 844 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 CLIP2Q9UDT6 1046 aa13.67□□□□□ -0.22
COL11A1-211ENST00000635193 EPB41L2O43491 1005 aaKnown RBP13.66□□□□□ -0.22
COL11A1-211ENST00000635193 CDKL5O76039 1030 aa13.66□□□□□ -0.22
COL11A1-211ENST00000635193 CCDC148Q8NFR7 591 aa13.66□□□□□ -0.22
COL11A1-211ENST00000635193 CCDC69A6NI79 296 aa13.66□□□□□ -0.22
COL11A1-211ENST00000635193 ATAD2Q6PL18 1390 aa13.66□□□□□ -0.22
COL11A1-211ENST00000635193 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
COL11A1-211ENST00000635193 CCAR1Q8IX12 1150 aaKnown RBP13.66□□□□□ -0.22
COL11A1-211ENST00000635193 ANO10Q9NW15 660 aa13.66□□□□□ -0.22
COL11A1-211ENST00000635193 PRPF40BQ6NWY9 871 aaKnown RBP13.65□□□□□ -0.22
COL11A1-211ENST00000635193 THUMPD2Q9BTF0 503 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms