RNA–Protein interactions for RNA: ENST00000635129.1

SMARCA2-234, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-234ENST00000635129 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
SMARCA2-234ENST00000635129 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
SMARCA2-234ENST00000635129 CCDC27Q2M243 656 aa12.22□□□□□ -0.45
SMARCA2-234ENST00000635129 C1orf141Q5JVX7 400 aa12.22□□□□□ -0.45
SMARCA2-234ENST00000635129 RTF1Q92541 710 aaKnown RBP12.22□□□□□ -0.45
SMARCA2-234ENST00000635129 TRIM35Q9UPQ4 493 aa12.22□□□□□ -0.45
SMARCA2-234ENST00000635129 SPG7Q9UQ90 795 aa12.22□□□□□ -0.45
SMARCA2-234ENST00000635129 BCL9LQ86UU0 1499 aa12.21□□□□□ -0.45
SMARCA2-234ENST00000635129 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.45
SMARCA2-234ENST00000635129 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.45
SMARCA2-234ENST00000635129 VPS72Q15906 364 aa12.21□□□□□ -0.45
SMARCA2-234ENST00000635129 NCBP3Q53F19 620 aaKnown RBP12.21□□□□□ -0.45
SMARCA2-234ENST00000635129 NRAPQ86VF7 1730 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 DCTN1Q14203 1278 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 ZCRB1Q8TBF4 217 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 THRAP3Q9Y2W1 955 aaKnown RBP12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 NWD2Q9ULI1 1742 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 OVOS2A0A0G2JMS6 1433 aa12.2□□□□□ -0.46
SMARCA2-234ENST00000635129 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 PDE3BQ13370 1112 aa12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 AKAP4Q5JQC9 854 aa12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 MCM10Q7L590 875 aa12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 WDR63Q8IWG1 891 aa12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.19□□□□□ -0.464e-7■□□□□ 8.8
SMARCA2-234ENST00000635129 TRPC5Q9UL62 973 aaPredicted RBP12.19□□□□□ -0.46
SMARCA2-234ENST00000635129 A0A0G2JS52 829 aa12.18□□□□□ -0.46
SMARCA2-234ENST00000635129 MYT1Q01538 1121 aa12.18□□□□□ -0.46
SMARCA2-234ENST00000635129 CALD1Q05682 793 aaKnown RBP12.18□□□□□ -0.46
SMARCA2-234ENST00000635129 CDCA7Q9BWT1 371 aaPredicted RBP12.18□□□□□ -0.46
SMARCA2-234ENST00000635129 PLEKHG2Q9H7P9 1386 aa12.18□□□□□ -0.46
SMARCA2-234ENST00000635129 PCDH11XQ9BZA7 1347 aa12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 PCDH11YQ9BZA8 1340 aa12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 HTATSF1O43719 755 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 PHKG2P15735 406 aa12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 FAM98CQ17RN3 349 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 BARGINQ6ZT62 677 aa12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 DDX54Q8TDD1 881 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 DISP2A7MBM2 1401 aa12.17□□□□□ -0.46
SMARCA2-234ENST00000635129 E9PSI1 815 aa12.16□□□□□ -0.46
SMARCA2-234ENST00000635129 EXOC5O00471 708 aa12.16□□□□□ -0.46
SMARCA2-234ENST00000635129 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
SMARCA2-234ENST00000635129 GJD4Q96KN9 370 aaPredicted RBP12.16□□□□□ -0.46
SMARCA2-234ENST00000635129 QTRT2Q9H974 415 aaKnown RBP12.16□□□□□ -0.46
SMARCA2-234ENST00000635129 SPINK5Q9NQ38 1064 aaPredicted RBP12.16□□□□□ -0.46
SMARCA2-234ENST00000635129 ATRNO75882 1429 aa12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 CYP27B1O15528 508 aa12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 RNMTO43148 476 aaKnown RBP12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 HSP90AB1P08238 724 aaKnown RBP12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 SLFN5Q08AF3 891 aa12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 DDB1Q16531 1140 aa12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 IL17REQ8NFR9 667 aa12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 MYH16Q9H6N6 1097 aa12.15□□□□□ -0.46
SMARCA2-234ENST00000635129 PARP4Q9UKK3 1724 aaKnown RBP12.14□□□□□ -0.47
SMARCA2-234ENST00000635129 IL16Q14005 1332 aa12.14□□□□□ -0.47
SMARCA2-234ENST00000635129 LGR6Q9HBX8 967 aa12.14□□□□□ -0.47
SMARCA2-234ENST00000635129 GNAI1P63096 354 aa12.13□□□□□ -0.47
SMARCA2-234ENST00000635129 TEFQ10587 303 aa12.13□□□□□ -0.47
SMARCA2-234ENST00000635129 DUSP27Q5VZP5 1158 aa12.13□□□□□ -0.47
SMARCA2-234ENST00000635129 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
SMARCA2-234ENST00000635129 IFT57Q9NWB7 429 aa12.13□□□□□ -0.47
SMARCA2-234ENST00000635129 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.13□□□□□ -0.47
SMARCA2-234ENST00000635129 TNS2Q63HR2 1409 aa12.12□□□□□ -0.47
SMARCA2-234ENST00000635129 ILDR1Q86SU0 546 aaPredicted RBP12.12□□□□□ -0.47
SMARCA2-234ENST00000635129 TSR2Q969E8 191 aaKnown RBP12.12□□□□□ -0.47
SMARCA2-234ENST00000635129 FANCIQ9NVI1 1328 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 PKD1L3Q7Z443 1732 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 CEMIPQ8WUJ3 1361 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 CFAP44Q96MT7 982 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 MIS18AQ9NYP9 233 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 TSPYL4Q9UJ04 414 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 DLG5Q8TDM6 1919 aa12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 KDM6AO15550 1401 aaPredicted RBP12.11□□□□□ -0.47
SMARCA2-234ENST00000635129 ZNF853P0CG23 659 aa12.1□□□□□ -0.47
SMARCA2-234ENST00000635129 CABP4P57796 275 aa12.1□□□□□ -0.47
SMARCA2-234ENST00000635129 TAF7Q15545 349 aaPredicted RBP12.1□□□□□ -0.47
SMARCA2-234ENST00000635129 TRMT2AQ8IZ69 625 aaKnown RBP12.1□□□□□ -0.47
SMARCA2-234ENST00000635129 GLI3P10071 1580 aa12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 BTBD11A6QL63 1104 aa12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 CHL1O00533 1208 aa12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 RBM6P78332 1123 aaKnown RBP12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 NKX1-1Q15270 411 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 SEPT12Q8IYM1 358 aa12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 MARCH10Q8NA82 808 aaPredicted RBP12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 SLC52A2Q9HAB3 445 aa12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
SMARCA2-234ENST00000635129 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
SMARCA2-234ENST00000635129 ERVV-2B6SEH9 535 aa12.07□□□□□ -0.48
SMARCA2-234ENST00000635129 RXRBP28702 533 aa12.07□□□□□ -0.48
SMARCA2-234ENST00000635129 NFATC2IPQ8NCF5 419 aa12.07□□□□□ -0.48
SMARCA2-234ENST00000635129 BABAM1Q9NWV8 329 aa12.07□□□□□ -0.48
SMARCA2-234ENST00000635129 LRRC37A3O60309 1634 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms