RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 RRS1Q15050 365 aaKnown RBP21.71■■□□□ 1.07
SNRNP48-203ENST00000634363 AKT1S1Q96B36 256 aa21.71■■□□□ 1.07
SNRNP48-203ENST00000634363 ZNF784Q8NCA9 323 aaPredicted RBP21.7■■□□□ 1.06
SNRNP48-203ENST00000634363 GPR162Q16538 588 aa21.69■■□□□ 1.06
SNRNP48-203ENST00000634363 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
SNRNP48-203ENST00000634363 USHBP1Q8N6Y0 703 aa21.68■■□□□ 1.06
SNRNP48-203ENST00000634363 SLC16A10Q8TF71 515 aa21.68■■□□□ 1.06
SNRNP48-203ENST00000634363 DOT1LQ8TEK3 1739 aa21.68■■□□□ 1.06
SNRNP48-203ENST00000634363 CHD4Q14839 1912 aa21.68■■□□□ 1.06
SNRNP48-203ENST00000634363 ANKRD36BQ8N2N9 1353 aa21.67■■□□□ 1.06
SNRNP48-203ENST00000634363 POLD1P28340 1107 aa21.67■■□□□ 1.06
SNRNP48-203ENST00000634363 PNPLA7Q6ZV29 1317 aa21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 FYB1O15117 783 aa21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 MSH5O43196 834 aa21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 TMF1P82094 1093 aa21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 PELP1Q8IZL8 1130 aaKnown RBP21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
SNRNP48-203ENST00000634363 USP47Q96K76 1375 aa21.65■■□□□ 1.06
SNRNP48-203ENST00000634363 RAPGEF4Q8WZA2 1011 aa21.64■■□□□ 1.05
SNRNP48-203ENST00000634363 CCNL1Q9UK58 526 aaPredicted RBP21.64■■□□□ 1.05
SNRNP48-203ENST00000634363 MEGF6O75095 1541 aa21.64■■□□□ 1.05
SNRNP48-203ENST00000634363 QSER1Q2KHR3 1735 aa21.63■■□□□ 1.05
SNRNP48-203ENST00000634363 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
SNRNP48-203ENST00000634363 TUBGCP6Q96RT7 1819 aa21.62■■□□□ 1.05
SNRNP48-203ENST00000634363 LY75O60449 1722 aa21.62■■□□□ 1.05
SNRNP48-203ENST00000634363 NSD2O96028 1365 aa21.61■■□□□ 1.05
SNRNP48-203ENST00000634363 TATP17735 454 aaPredicted RBP21.61■■□□□ 1.05
SNRNP48-203ENST00000634363 MAP3K5Q99683 1374 aa21.61■■□□□ 1.05
SNRNP48-203ENST00000634363 HSP90AB2PQ58FF8 381 aa21.6■■□□□ 1.05
SNRNP48-203ENST00000634363 SMG6Q86US8 1419 aaKnown RBP21.6■■□□□ 1.05
SNRNP48-203ENST00000634363 RTL1A6NKG5 1358 aa21.6■■□□□ 1.05
SNRNP48-203ENST00000634363 CGNL1Q0VF96 1302 aa21.58■■□□□ 1.05
SNRNP48-203ENST00000634363 COL23A1Q86Y22 540 aaPredicted RBP21.58■■□□□ 1.05
SNRNP48-203ENST00000634363 NLGN2Q8NFZ4 835 aa21.57■■□□□ 1.04
SNRNP48-203ENST00000634363 CDCA8Q53HL2 280 aa21.56■■□□□ 1.04
SNRNP48-203ENST00000634363 MSL1Q68DK7 614 aa21.56■■□□□ 1.04
SNRNP48-203ENST00000634363 MPRIPQ6WCQ1 1025 aa21.56■■□□□ 1.04
SNRNP48-203ENST00000634363 KIF20BQ96Q89 1820 aa21.55■■□□□ 1.04
SNRNP48-203ENST00000634363 PPM1GO15355 546 aaPredicted RBP21.55■■□□□ 1.04
SNRNP48-203ENST00000634363 INSRP06213 1382 aa21.55■■□□□ 1.04
SNRNP48-203ENST00000634363 UTRNP46939 3433 aa21.54■■□□□ 1.04
SNRNP48-203ENST00000634363 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
SNRNP48-203ENST00000634363 PCDH11XQ9BZA7 1347 aa21.54■■□□□ 1.04
SNRNP48-203ENST00000634363 PCDH11YQ9BZA8 1340 aa21.54■■□□□ 1.04
SNRNP48-203ENST00000634363 FLT4P35916 1363 aa21.52■■□□□ 1.04
SNRNP48-203ENST00000634363 CARD14Q9BXL6 1004 aa21.52■■□□□ 1.04
SNRNP48-203ENST00000634363 EMILIN1Q9Y6C2 1016 aa21.52■■□□□ 1.04
SNRNP48-203ENST00000634363 SENP3-EIF4A1A0A087X0R7 540 aa21.51■■□□□ 1.03
SNRNP48-203ENST00000634363 C1QTNF8P60827 252 aa21.51■■□□□ 1.03
SNRNP48-203ENST00000634363 CYP27B1O15528 508 aa21.5■■□□□ 1.03
SNRNP48-203ENST00000634363 EIF4G2P78344 907 aaKnown RBP eCLIP21.5■■□□□ 1.03
SNRNP48-203ENST00000634363 C5P01031 1676 aa21.5■■□□□ 1.03
SNRNP48-203ENST00000634363 PALLDQ8WX93 1383 aa21.49■■□□□ 1.03
SNRNP48-203ENST00000634363 ITGB4P16144 1822 aa21.48■■□□□ 1.03
SNRNP48-203ENST00000634363 NSD3Q9BZ95 1437 aa21.47■■□□□ 1.03
SNRNP48-203ENST00000634363 YBX3P16989 372 aaKnown RBP eCLIP21.47■■□□□ 1.03
SNRNP48-203ENST00000634363 HMGB2P26583 209 aaKnown RBP21.47■■□□□ 1.03
SNRNP48-203ENST00000634363 KIF24Q5T7B8 1368 aa21.47■■□□□ 1.03
SNRNP48-203ENST00000634363 TAF1LQ8IZX4 1826 aa21.46■■□□□ 1.03
SNRNP48-203ENST00000634363 GRIN3BO60391 1043 aa21.46■■□□□ 1.03
SNRNP48-203ENST00000634363 FLAD1Q8NFF5 587 aa21.46■■□□□ 1.03
SNRNP48-203ENST00000634363 SMARCC1Q92922 1105 aaPredicted RBP21.46■■□□□ 1.03
SNRNP48-203ENST00000634363 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
SNRNP48-203ENST00000634363 AK7Q96M32 723 aa21.45■■□□□ 1.02
SNRNP48-203ENST00000634363 SPG7Q9UQ90 795 aa21.45■■□□□ 1.02
SNRNP48-203ENST00000634363 MAP2P11137 1827 aaKnown RBP21.44■■□□□ 1.02
SNRNP48-203ENST00000634363 GIGYF1O75420 1035 aaPredicted RBP21.44■■□□□ 1.02
SNRNP48-203ENST00000634363 PHF14O94880 888 aa21.44■■□□□ 1.02
SNRNP48-203ENST00000634363 HSPA5P11021 654 aaKnown RBP21.44■■□□□ 1.02
SNRNP48-203ENST00000634363 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
SNRNP48-203ENST00000634363 PIGBQ92521 554 aa21.44■■□□□ 1.02
SNRNP48-203ENST00000634363 TOGARAM1Q9Y4F4 1720 aa21.43■■□□□ 1.02
SNRNP48-203ENST00000634363 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
SNRNP48-203ENST00000634363 EYA1Q99502 592 aa21.41■■□□□ 1.02
SNRNP48-203ENST00000634363 CD2APQ9Y5K6 639 aa21.41■■□□□ 1.02
SNRNP48-203ENST00000634363 C4BP0C0L5 1744 aa21.41■■□□□ 1.02
SNRNP48-203ENST00000634363 WASHC2AQ641Q2 1341 aa21.4■■□□□ 1.02
SNRNP48-203ENST00000634363 AMIGO3Q86WK7 504 aa21.4■■□□□ 1.02
SNRNP48-203ENST00000634363 PKD1L3Q7Z443 1732 aa21.4■■□□□ 1.02
SNRNP48-203ENST00000634363 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.39■■□□□ 1.01
SNRNP48-203ENST00000634363 NKX1-1Q15270 411 aaPredicted RBP21.39■■□□□ 1.01
SNRNP48-203ENST00000634363 TMOD3Q9NYL9 352 aa21.39■■□□□ 1.01
SNRNP48-203ENST00000634363 WWC3Q9ULE0 1092 aa21.39■■□□□ 1.01
SNRNP48-203ENST00000634363 LOC102724428A0A0B4J2F2 783 aa21.38■■□□□ 1.01
SNRNP48-203ENST00000634363 SIK1P57059 783 aa21.38■■□□□ 1.01
SNRNP48-203ENST00000634363 POLKQ9UBT6 870 aa21.38■■□□□ 1.01
SNRNP48-203ENST00000634363 ASAP1Q9ULH1 1129 aa21.37■■□□□ 1.01
SNRNP48-203ENST00000634363 IFNL2Q8IZJ0 200 aa21.36■■□□□ 1.01
SNRNP48-203ENST00000634363 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
SNRNP48-203ENST00000634363 UBR3Q6ZT12 1888 aa21.35■■□□□ 1.01
SNRNP48-203ENST00000634363 ATP6V1AP38606 617 aa21.35■■□□□ 1.01
SNRNP48-203ENST00000634363 PHKG2P15735 406 aa21.34■■□□□ 1.01
SNRNP48-203ENST00000634363 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.34■■□□□ 1.012e-7■■■■□ 24.2
SNRNP48-203ENST00000634363 ANKRD26Q9UPS8 1709 aa21.33■■□□□ 1.01
SNRNP48-203ENST00000634363 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
SNRNP48-203ENST00000634363 GNPATO15228 680 aa21.33■■□□□ 1.01
SNRNP48-203ENST00000634363 SSFA2P28290 1259 aa21.33■■□□□ 1.01
SNRNP48-203ENST00000634363 GOLGB1Q14789 3259 aaKnown RBP21.32■■□□□ 1
SNRNP48-203ENST00000634363 ITPK1Q13572 414 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 256.2 ms