RNA–Protein interactions for RNA: ENST00000634287.1

SMARCA2-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 424 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-219ENST00000634287 CDCA8Q53HL2 280 aa21.98■■□□□ 1.11
SMARCA2-219ENST00000634287 GGNBP2Q9H3C7 697 aa21.98■■□□□ 1.11
SMARCA2-219ENST00000634287 CGNL1Q0VF96 1302 aa21.98■■□□□ 1.11
SMARCA2-219ENST00000634287 TFCP2L1Q9NZI6 479 aa21.97■■□□□ 1.11
SMARCA2-219ENST00000634287 GOLGB1Q14789 3259 aaKnown RBP21.97■■□□□ 1.11
SMARCA2-219ENST00000634287 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
SMARCA2-219ENST00000634287 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
SMARCA2-219ENST00000634287 POLD1P28340 1107 aa21.95■■□□□ 1.1
SMARCA2-219ENST00000634287 RAPGEF4Q8WZA2 1011 aa21.95■■□□□ 1.1
SMARCA2-219ENST00000634287 USP47Q96K76 1375 aa21.95■■□□□ 1.1
SMARCA2-219ENST00000634287 SMG6Q86US8 1419 aaKnown RBP21.95■■□□□ 1.1
SMARCA2-219ENST00000634287 QSER1Q2KHR3 1735 aa21.94■■□□□ 1.1
SMARCA2-219ENST00000634287 CHD4Q14839 1912 aa21.94■■□□□ 1.1
SMARCA2-219ENST00000634287 TRIM26Q12899 539 aaPredicted RBP21.94■■□□□ 1.1
SMARCA2-219ENST00000634287 MAP3K5Q99683 1374 aa21.94■■□□□ 1.1
SMARCA2-219ENST00000634287 MEGF6O75095 1541 aa21.93■■□□□ 1.1
SMARCA2-219ENST00000634287 KCNQ4P56696 695 aa21.93■■□□□ 1.1
SMARCA2-219ENST00000634287 PNPLA7Q6ZV29 1317 aa21.93■■□□□ 1.1
SMARCA2-219ENST00000634287 DOT1LQ8TEK3 1739 aa21.93■■□□□ 1.1
SMARCA2-219ENST00000634287 LY75O60449 1722 aa21.92■■□□□ 1.1
SMARCA2-219ENST00000634287 SHANK3Q9BYB0 1731 aa21.92■■□□□ 1.1
SMARCA2-219ENST00000634287 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
SMARCA2-219ENST00000634287 USHBP1Q8N6Y0 703 aa21.92■■□□□ 1.1
SMARCA2-219ENST00000634287 NSD2O96028 1365 aa21.91■■□□□ 1.1
SMARCA2-219ENST00000634287 CCNL1Q9UK58 526 aaPredicted RBP21.91■■□□□ 1.1
SMARCA2-219ENST00000634287 INSRP06213 1382 aa21.9■■□□□ 1.1
SMARCA2-219ENST00000634287 HMGB2P26583 209 aaKnown RBP21.9■■□□□ 1.1
SMARCA2-219ENST00000634287 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
SMARCA2-219ENST00000634287 ZNF784Q8NCA9 323 aaPredicted RBP21.9■■□□□ 1.1
SMARCA2-219ENST00000634287 KIF24Q5T7B8 1368 aa21.89■■□□□ 1.1
SMARCA2-219ENST00000634287 GPR162Q16538 588 aa21.89■■□□□ 1.09
SMARCA2-219ENST00000634287 FLT4P35916 1363 aa21.88■■□□□ 1.09
SMARCA2-219ENST00000634287 KIF20BQ96Q89 1820 aa21.88■■□□□ 1.09
SMARCA2-219ENST00000634287 KLHL34Q8N239 644 aa21.87■■□□□ 1.09
SMARCA2-219ENST00000634287 TUBGCP6Q96RT7 1819 aa21.87■■□□□ 1.09
SMARCA2-219ENST00000634287 COL24A1Q17RW2 1714 aa21.86■■□□□ 1.09
SMARCA2-219ENST00000634287 PCDH11XQ9BZA7 1347 aa21.86■■□□□ 1.09
SMARCA2-219ENST00000634287 PCDH11YQ9BZA8 1340 aa21.86■■□□□ 1.09
SMARCA2-219ENST00000634287 MSH5O43196 834 aa21.85■■□□□ 1.09
SMARCA2-219ENST00000634287 TIMELESSQ9UNS1 1208 aa21.85■■□□□ 1.09
SMARCA2-219ENST00000634287 CARD14Q9BXL6 1004 aa21.84■■□□□ 1.09
SMARCA2-219ENST00000634287 MPRIPQ6WCQ1 1025 aa21.83■■□□□ 1.09
SMARCA2-219ENST00000634287 COL23A1Q86Y22 540 aaPredicted RBP21.82■■□□□ 1.08
SMARCA2-219ENST00000634287 EMILIN1Q9Y6C2 1016 aa21.81■■□□□ 1.08
SMARCA2-219ENST00000634287 NSD3Q9BZ95 1437 aa21.8■■□□□ 1.08
SMARCA2-219ENST00000634287 PPM1GO15355 546 aaPredicted RBP21.8■■□□□ 1.08
SMARCA2-219ENST00000634287 CYP27B1O15528 508 aa21.8■■□□□ 1.08
SMARCA2-219ENST00000634287 PELP1Q8IZL8 1130 aaKnown RBP21.8■■□□□ 1.08
SMARCA2-219ENST00000634287 FLAD1Q8NFF5 587 aa21.8■■□□□ 1.08
SMARCA2-219ENST00000634287 SMARCC1Q92922 1105 aaPredicted RBP21.79■■□□□ 1.08
SMARCA2-219ENST00000634287 SPG7Q9UQ90 795 aa21.78■■□□□ 1.08
SMARCA2-219ENST00000634287 PALLDQ8WX93 1383 aa21.77■■□□□ 1.08
SMARCA2-219ENST00000634287 C5P01031 1676 aa21.77■■□□□ 1.08
SMARCA2-219ENST00000634287 NLGN2Q8NFZ4 835 aa21.77■■□□□ 1.08
SMARCA2-219ENST00000634287 MAP2P11137 1827 aaKnown RBP21.77■■□□□ 1.08
SMARCA2-219ENST00000634287 ITGB4P16144 1822 aa21.77■■□□□ 1.08
SMARCA2-219ENST00000634287 WASHC2AQ641Q2 1341 aa21.77■■□□□ 1.07
SMARCA2-219ENST00000634287 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
SMARCA2-219ENST00000634287 NKX1-1Q15270 411 aaPredicted RBP21.75■■□□□ 1.07
SMARCA2-219ENST00000634287 GRIN3BO60391 1043 aa21.74■■□□□ 1.07
SMARCA2-219ENST00000634287 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.74■■□□□ 1.07
SMARCA2-219ENST00000634287 PKD1L3Q7Z443 1732 aa21.73■■□□□ 1.07
SMARCA2-219ENST00000634287 MSL1Q68DK7 614 aa21.73■■□□□ 1.07
SMARCA2-219ENST00000634287 PIGBQ92521 554 aa21.73■■□□□ 1.07
SMARCA2-219ENST00000634287 AK7Q96M32 723 aa21.72■■□□□ 1.07
SMARCA2-219ENST00000634287 EYA1Q99502 592 aa21.72■■□□□ 1.07
SMARCA2-219ENST00000634287 CLSPNQ9HAW4 1339 aa21.72■■□□□ 1.07
SMARCA2-219ENST00000634287 NCAPD2Q15021 1401 aa21.72■■□□□ 1.07
SMARCA2-219ENST00000634287 C1QTNF8P60827 252 aa21.71■■□□□ 1.07
SMARCA2-219ENST00000634287 POLKQ9UBT6 870 aa21.71■■□□□ 1.07
SMARCA2-219ENST00000634287 CD2APQ9Y5K6 639 aa21.71■■□□□ 1.07
SMARCA2-219ENST00000634287 ANKRD26Q9UPS8 1709 aa21.7■■□□□ 1.06
SMARCA2-219ENST00000634287 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
SMARCA2-219ENST00000634287 POLR3GLQ9BT43 218 aa21.7■■□□□ 1.06
SMARCA2-219ENST00000634287 IFNL2Q8IZJ0 200 aa21.69■■□□□ 1.06
SMARCA2-219ENST00000634287 TMOD3Q9NYL9 352 aa21.69■■□□□ 1.06
SMARCA2-219ENST00000634287 C4BP0C0L5 1744 aa21.69■■□□□ 1.06
SMARCA2-219ENST00000634287 YBX3P16989 372 aaKnown RBP eCLIP21.68■■□□□ 1.062e-6■□□□□ 10.1
SMARCA2-219ENST00000634287 LOC102724428A0A0B4J2F2 783 aa21.67■■□□□ 1.06
SMARCA2-219ENST00000634287 SIK1P57059 783 aa21.67■■□□□ 1.06
SMARCA2-219ENST00000634287 PCGF6Q9BYE7 350 aa21.67■■□□□ 1.06
SMARCA2-219ENST00000634287 PHKG2P15735 406 aa21.66■■□□□ 1.06
SMARCA2-219ENST00000634287 UBR3Q6ZT12 1888 aa21.65■■□□□ 1.06
SMARCA2-219ENST00000634287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.65■■□□□ 1.06
SMARCA2-219ENST00000634287 GIGYF1O75420 1035 aaPredicted RBP21.65■■□□□ 1.06
SMARCA2-219ENST00000634287 PHF14O94880 888 aa21.65■■□□□ 1.06
SMARCA2-219ENST00000634287 SSFA2P28290 1259 aa21.65■■□□□ 1.06
SMARCA2-219ENST00000634287 TNNT2P45379 298 aaPredicted RBP21.65■■□□□ 1.06
SMARCA2-219ENST00000634287 SENP3-EIF4A1A0A087X0R7 540 aa21.64■■□□□ 1.05
SMARCA2-219ENST00000634287 EIF4A2Q14240 407 aaKnown RBP21.64■■□□□ 1.05
SMARCA2-219ENST00000634287 ASAP1Q9ULH1 1129 aa21.64■■□□□ 1.05
SMARCA2-219ENST00000634287 ATP6V1AP38606 617 aa21.63■■□□□ 1.05
SMARCA2-219ENST00000634287 EIF4G2P78344 907 aaKnown RBP eCLIP21.62■■□□□ 1.054e-7■■■■□ 19.9
SMARCA2-219ENST00000634287 AMIGO3Q86WK7 504 aa21.62■■□□□ 1.05
SMARCA2-219ENST00000634287 LINC00116Q8NCU8 138 aa21.62■■□□□ 1.05
SMARCA2-219ENST00000634287 PLEKHG2Q9H7P9 1386 aa21.61■■□□□ 1.05
SMARCA2-219ENST00000634287 SMIM5Q71RC9 77 aa21.6■■□□□ 1.05
SMARCA2-219ENST00000634287 PANK3Q9H999 370 aa21.6■■□□□ 1.05
SMARCA2-219ENST00000634287 ATG3Q9NT62 314 aa21.6■■□□□ 1.05
SMARCA2-219ENST00000634287 ERVV-2B6SEH9 535 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms