RNA–Protein interactions for RNA: ENST00000633522.1

LINC01002-229, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 5

Gene LINC01002, Length 570 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-229ENST00000633522 HSPA1AP0DMV8 641 aaKnown RBP16.29■□□□□ 0.2
LINC01002-229ENST00000633522 HSPA1BP0DMV9 641 aaKnown RBP16.29■□□□□ 0.2
LINC01002-229ENST00000633522 CSB-PGBD3P0DP91 1061 aa16.29■□□□□ 0.2
LINC01002-229ENST00000633522 C10orf71Q711Q0 1435 aa16.28■□□□□ 0.2
LINC01002-229ENST00000633522 ERBB3P21860 1342 aa16.28■□□□□ 0.2
LINC01002-229ENST00000633522 FSTL1Q12841 308 aa16.28■□□□□ 0.2
LINC01002-229ENST00000633522 IL2RBP14784 551 aa16.27■□□□□ 0.2
LINC01002-229ENST00000633522 TNRC6CQ9HCJ0 1690 aaKnown RBP16.27■□□□□ 0.19
LINC01002-229ENST00000633522 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
LINC01002-229ENST00000633522 KIAA1210Q9ULL0 1709 aa16.26■□□□□ 0.19
LINC01002-229ENST00000633522 TNRC18O15417 2968 aaPredicted RBP16.26■□□□□ 0.19
LINC01002-229ENST00000633522 ARFGEF1Q9Y6D6 1849 aa16.25■□□□□ 0.19
LINC01002-229ENST00000633522 PPARGC1BQ86YN6 1023 aaKnown RBP16.25■□□□□ 0.19
LINC01002-229ENST00000633522 KCNH5Q8NCM2 988 aa16.24■□□□□ 0.19
LINC01002-229ENST00000633522 SBF1O95248 1867 aa16.24■□□□□ 0.19
LINC01002-229ENST00000633522 PXDNLA1KZ92 1463 aa16.23■□□□□ 0.19
LINC01002-229ENST00000633522 C4BP0C0L5 1744 aa16.23■□□□□ 0.19
LINC01002-229ENST00000633522 AMIGO3Q86WK7 504 aa16.23■□□□□ 0.19
LINC01002-229ENST00000633522 CCNL1Q9UK58 526 aaPredicted RBP16.23■□□□□ 0.19
LINC01002-229ENST00000633522 FAM208AQ9UK61 1670 aaKnown RBP16.23■□□□□ 0.19
LINC01002-229ENST00000633522 MSH5O43196 834 aa16.22■□□□□ 0.19
LINC01002-229ENST00000633522 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
LINC01002-229ENST00000633522 CABP2Q9NPB3 220 aa16.22■□□□□ 0.19
LINC01002-229ENST00000633522 CABP1Q9NZU7 370 aa16.21■□□□□ 0.19
LINC01002-229ENST00000633522 TTC21BQ7Z4L5 1316 aa16.2■□□□□ 0.18
LINC01002-229ENST00000633522 KCPQ6ZWJ8 1503 aa16.2■□□□□ 0.18
LINC01002-229ENST00000633522 MON2Q7Z3U7 1717 aa16.19■□□□□ 0.18
LINC01002-229ENST00000633522 RGPD2P0DJD1 1756 aa16.19■□□□□ 0.18
LINC01002-229ENST00000633522 NLRP2Q9NX02 1062 aa16.19■□□□□ 0.18
LINC01002-229ENST00000633522 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
LINC01002-229ENST00000633522 MAP2P11137 1827 aaKnown RBP16.18■□□□□ 0.18
LINC01002-229ENST00000633522 SOX12O15370 315 aa16.18■□□□□ 0.18
LINC01002-229ENST00000633522 DCAF11Q8TEB1 546 aa16.18■□□□□ 0.18
LINC01002-229ENST00000633522 SRPK2P78362 688 aaKnown RBP16.17■□□□□ 0.18
LINC01002-229ENST00000633522 FLAD1Q8NFF5 587 aa16.16■□□□□ 0.18
LINC01002-229ENST00000633522 STAC3Q96MF2 364 aa16.16■□□□□ 0.18
LINC01002-229ENST00000633522 PLEKHG2Q9H7P9 1386 aa16.15■□□□□ 0.18
LINC01002-229ENST00000633522 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
LINC01002-229ENST00000633522 FAM161AQ3B820 660 aa16.14■□□□□ 0.17
LINC01002-229ENST00000633522 SYTL4Q96C24 671 aaPredicted RBP16.14■□□□□ 0.17
LINC01002-229ENST00000633522 ITGB4P16144 1822 aa16.14■□□□□ 0.17
LINC01002-229ENST00000633522 TTC21AQ8NDW8 1320 aa16.14■□□□□ 0.17
LINC01002-229ENST00000633522 USP31Q70CQ4 1352 aa16.13■□□□□ 0.17
LINC01002-229ENST00000633522 SMIM5Q71RC9 77 aa16.13■□□□□ 0.17
LINC01002-229ENST00000633522 ANKRD24Q8TF21 1146 aa16.13■□□□□ 0.17
LINC01002-229ENST00000633522 C16orf71Q8IYS4 520 aaPredicted RBP16.12■□□□□ 0.17
LINC01002-229ENST00000633522 USP47Q96K76 1375 aa16.12■□□□□ 0.17
LINC01002-229ENST00000633522 PDE4DIPQ5VU43 2346 aa16.11■□□□□ 0.17
LINC01002-229ENST00000633522 C9orf131Q5VYM1 1079 aa16.11■□□□□ 0.17
LINC01002-229ENST00000633522 SMC1BQ8NDV3 1235 aa16.11■□□□□ 0.17
LINC01002-229ENST00000633522 MEGF6O75095 1541 aa16.1■□□□□ 0.17
LINC01002-229ENST00000633522 RRAGCQ9HB90 399 aa16.1■□□□□ 0.17
LINC01002-229ENST00000633522 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
LINC01002-229ENST00000633522 PRDM10Q9NQV6 1147 aa16.09■□□□□ 0.17
LINC01002-229ENST00000633522 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
LINC01002-229ENST00000633522 FOXN1O15353 648 aa16.08■□□□□ 0.16
LINC01002-229ENST00000633522 NBPF1Q3BBV0 1214 aa16.08■□□□□ 0.16
LINC01002-229ENST00000633522 ARHGAP27Q6ZUM4 889 aa16.08■□□□□ 0.16
LINC01002-229ENST00000633522 BCS1LQ9Y276 419 aa16.08■□□□□ 0.16
LINC01002-229ENST00000633522 TGFB2P61812 414 aa16.07■□□□□ 0.16
LINC01002-229ENST00000633522 ZNF692Q9BU19 519 aaPredicted RBP16.07■□□□□ 0.16
LINC01002-229ENST00000633522 KDM2BQ8NHM5 1336 aa16.07■□□□□ 0.16
LINC01002-229ENST00000633522 C4AP0C0L4 1744 aa16.06■□□□□ 0.16
LINC01002-229ENST00000633522 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
LINC01002-229ENST00000633522 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.06■□□□□ 0.16
LINC01002-229ENST00000633522 A0A0G2JLW4 131 aa16.06■□□□□ 0.16
LINC01002-229ENST00000633522 KCNA3P22001 575 aa16.06■□□□□ 0.16
LINC01002-229ENST00000633522 NSD3Q9BZ95 1437 aa16.05■□□□□ 0.16
LINC01002-229ENST00000633522 RGS19P49795 217 aa16.05■□□□□ 0.16
LINC01002-229ENST00000633522 CCDC88AQ3V6T2 1871 aa16.05■□□□□ 0.16
LINC01002-229ENST00000633522 KDM6AO15550 1401 aaPredicted RBP16.04■□□□□ 0.16
LINC01002-229ENST00000633522 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
LINC01002-229ENST00000633522 SSFA2P28290 1259 aa16.03■□□□□ 0.16
LINC01002-229ENST00000633522 TIAM2Q8IVF5 1701 aa16.02■□□□□ 0.16
LINC01002-229ENST00000633522 PHF14O94880 888 aa16.02■□□□□ 0.16
LINC01002-229ENST00000633522 MMP10P09238 476 aa16.02■□□□□ 0.16
LINC01002-229ENST00000633522 DPEP1P16444 411 aa16.02■□□□□ 0.16
LINC01002-229ENST00000633522 ZCRB1Q8TBF4 217 aaKnown RBP16.02■□□□□ 0.16
LINC01002-229ENST00000633522 KTN1Q86UP2 1357 aaKnown RBP16.01■□□□□ 0.15
LINC01002-229ENST00000633522 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
LINC01002-229ENST00000633522 ABHD8Q96I13 439 aa16.01■□□□□ 0.15
LINC01002-229ENST00000633522 DCAF5Q96JK2 942 aa16.01■□□□□ 0.15
LINC01002-229ENST00000633522 AK7Q96M32 723 aa16.01■□□□□ 0.15
LINC01002-229ENST00000633522 FCHSD2O94868 740 aa16■□□□□ 0.15
LINC01002-229ENST00000633522 IP6K1Q92551 441 aa16■□□□□ 0.15
LINC01002-229ENST00000633522 NME9Q86XW9 330 aa15.99■□□□□ 0.15
LINC01002-229ENST00000633522 RNF181Q9P0P0 153 aa15.99■□□□□ 0.15
LINC01002-229ENST00000633522 POTECB2RU33 542 aa15.98■□□□□ 0.15
LINC01002-229ENST00000633522 HMGB2P26583 209 aaKnown RBP15.98■□□□□ 0.15
LINC01002-229ENST00000633522 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
LINC01002-229ENST00000633522 MLLT1Q03111 559 aaPredicted RBP15.97■□□□□ 0.15
LINC01002-229ENST00000633522 ZC3H4Q9UPT8 1303 aaKnown RBP15.96■□□□□ 0.15
LINC01002-229ENST00000633522 EVC2Q86UK5 1308 aa15.95■□□□□ 0.14
LINC01002-229ENST00000633522 COL5A3P25940 1745 aaPredicted RBP15.95■□□□□ 0.14
LINC01002-229ENST00000633522 CTCFP49711 727 aaPredicted RBP15.95■□□□□ 0.14
LINC01002-229ENST00000633522 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
LINC01002-229ENST00000633522 MKRN1Q9UHC7 482 aaKnown RBP15.95■□□□□ 0.14
LINC01002-229ENST00000633522 CNTNAP1P78357 1384 aa15.95■□□□□ 0.14
LINC01002-229ENST00000633522 DICER1Q9UPY3 1922 aaKnown RBP15.94■□□□□ 0.14
LINC01002-229ENST00000633522 VEGFAP15692 232 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms