RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 POLKQ9UBT6 870 aa25.27■■□□□ 1.64
PNKP-224ENST00000631020 PTF1AQ7RTS3 328 aa25.26■■□□□ 1.63
PNKP-224ENST00000631020 EMILIN1Q9Y6C2 1016 aa25.25■■□□□ 1.63
PNKP-224ENST00000631020 MAP2P11137 1827 aaKnown RBP25.23■■□□□ 1.63
PNKP-224ENST00000631020 PRKRIP1Q9H875 184 aaPredicted RBP25.22■■□□□ 1.63
PNKP-224ENST00000631020 SHANK3Q9BYB0 1731 aa25.21■■□□□ 1.63
PNKP-224ENST00000631020 RALBP1Q15311 655 aa25.21■■□□□ 1.63
PNKP-224ENST00000631020 MEGF6O75095 1541 aa25.2■■□□□ 1.62
PNKP-224ENST00000631020 PPP2R1AP30153 589 aa25.2■■□□□ 1.62
PNKP-224ENST00000631020 HSP90AB2PQ58FF8 381 aa25.2■■□□□ 1.62
PNKP-224ENST00000631020 NBPF6Q5VWK0 638 aa25.2■■□□□ 1.62
PNKP-224ENST00000631020 NBPF4Q96M43 638 aa25.2■■□□□ 1.62
PNKP-224ENST00000631020 BTAF1O14981 1849 aa25.2■■□□□ 1.62
PNKP-224ENST00000631020 PPM1GO15355 546 aaPredicted RBP25.19■■□□□ 1.62
PNKP-224ENST00000631020 KCNQ2O43526 872 aa25.19■■□□□ 1.62
PNKP-224ENST00000631020 PROM2Q8N271 834 aa25.19■■□□□ 1.62
PNKP-224ENST00000631020 KAT6BQ8WYB5 2073 aa25.18■■□□□ 1.62
PNKP-224ENST00000631020 MTHFSP49914 203 aa25.18■■□□□ 1.62
PNKP-224ENST00000631020 TXNRD1Q16881 649 aa25.17■■□□□ 1.62
PNKP-224ENST00000631020 ZCRB1Q8TBF4 217 aaKnown RBP25.17■■□□□ 1.62
PNKP-224ENST00000631020 DIEXFQ68CQ4 756 aaKnown RBP25.16■■□□□ 1.62
PNKP-224ENST00000631020 DDX54Q8TDD1 881 aaKnown RBP25.16■■□□□ 1.62
PNKP-224ENST00000631020 ACSBG1Q96GR2 724 aa25.16■■□□□ 1.62
PNKP-224ENST00000631020 RAPGEF4Q8WZA2 1011 aa25.15■■□□□ 1.62
PNKP-224ENST00000631020 NCAPD2Q15021 1401 aa25.14■■□□□ 1.62
PNKP-224ENST00000631020 ANP32CO43423 234 aa25.13■■□□□ 1.61
PNKP-224ENST00000631020 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
PNKP-224ENST00000631020 TATP17735 454 aaPredicted RBP25.12■■□□□ 1.61
PNKP-224ENST00000631020 ANO8Q9HCE9 1232 aaPredicted RBP25.12■■□□□ 1.61
PNKP-224ENST00000631020 CASZ1Q86V15 1759 aa25.11■■□□□ 1.61
PNKP-224ENST00000631020 MYBBP1AQ9BQG0 1328 aaKnown RBP25.11■■□□□ 1.61
PNKP-224ENST00000631020 USHBP1Q8N6Y0 703 aa25.11■■□□□ 1.61
PNKP-224ENST00000631020 PAPPAQ13219 1627 aa25.09■■□□□ 1.61
PNKP-224ENST00000631020 PKD1L3Q7Z443 1732 aa25.09■■□□□ 1.61
PNKP-224ENST00000631020 PCDH11XQ9BZA7 1347 aa25.07■■□□□ 1.6
PNKP-224ENST00000631020 PCDH11YQ9BZA8 1340 aa25.07■■□□□ 1.6
PNKP-224ENST00000631020 STK32BQ9NY57 414 aa25.07■■□□□ 1.6
PNKP-224ENST00000631020 EIF4A2Q14240 407 aaKnown RBP25.06■■□□□ 1.6
PNKP-224ENST00000631020 SLC15A2Q16348 729 aa25.06■■□□□ 1.6
PNKP-224ENST00000631020 SPON1Q9HCB6 807 aa25.06■■□□□ 1.6
PNKP-224ENST00000631020 PLEKHG2Q9H7P9 1386 aa25.06■■□□□ 1.6
PNKP-224ENST00000631020 LY75O60449 1722 aa25.05■■□□□ 1.6
PNKP-224ENST00000631020 PRIM1P49642 420 aaKnown RBP25.04■■□□□ 1.6
PNKP-224ENST00000631020 SLC27A3Q5K4L6 730 aa25.04■■□□□ 1.6
PNKP-224ENST00000631020 COL3A1P02461 1466 aaPredicted RBP25.03■■□□□ 1.6
PNKP-224ENST00000631020 IL13P35225 146 aa25.02■■□□□ 1.6
PNKP-224ENST00000631020 SYTL4Q96C24 671 aaPredicted RBP25.02■■□□□ 1.6
PNKP-224ENST00000631020 EYA1Q99502 592 aa25.02■■□□□ 1.6
PNKP-224ENST00000631020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.02■■□□□ 1.6
PNKP-224ENST00000631020 CCDC184Q52MB2 194 aa25.01■■□□□ 1.59
PNKP-224ENST00000631020 CFAP53Q96M91 514 aa25.01■■□□□ 1.59
PNKP-224ENST00000631020 DIAPH1O60610 1272 aaKnown RBP25■■□□□ 1.59
PNKP-224ENST00000631020 QSER1Q2KHR3 1735 aa25■■□□□ 1.59
PNKP-224ENST00000631020 LRRC4BQ9NT99 713 aa24.99■■□□□ 1.59
PNKP-224ENST00000631020 CYP27B1O15528 508 aa24.98■■□□□ 1.59
PNKP-224ENST00000631020 SPG7Q9UQ90 795 aa24.98■■□□□ 1.59
PNKP-224ENST00000631020 MIER1Q8N108 512 aa24.96■■□□□ 1.59
PNKP-224ENST00000631020 ITGB4P16144 1822 aa24.96■■□□□ 1.59
PNKP-224ENST00000631020 NKX1-1Q15270 411 aaPredicted RBP24.96■■□□□ 1.59
PNKP-224ENST00000631020 IGSF1Q8N6C5 1336 aa24.96■■□□□ 1.59
PNKP-224ENST00000631020 TOGARAM1Q9Y4F4 1720 aa24.95■■□□□ 1.59
PNKP-224ENST00000631020 PDGFDQ9GZP0 370 aaPredicted RBP24.95■■□□□ 1.58
PNKP-224ENST00000631020 HMGB2P26583 209 aaKnown RBP24.94■■□□□ 1.58
PNKP-224ENST00000631020 AKT1S1Q96B36 256 aa24.93■■□□□ 1.58
PNKP-224ENST00000631020 ZNF827Q17R98 1081 aa24.92■■□□□ 1.58
PNKP-224ENST00000631020 MTFR1LQ9H019 292 aa24.92■■□□□ 1.58
PNKP-224ENST00000631020 PPP1R1BQ9UD71 204 aaPredicted RBP24.92■■□□□ 1.58
PNKP-224ENST00000631020 U2SURPO15042 1029 aaKnown RBP24.91■■□□□ 1.58
PNKP-224ENST00000631020 ZBTB7AO95365 584 aa24.9■■□□□ 1.58
PNKP-224ENST00000631020 AEBP1Q8IUX7 1158 aa24.9■■□□□ 1.58
PNKP-224ENST00000631020 NUDCQ9Y266 331 aa24.9■■□□□ 1.58
PNKP-224ENST00000631020 PTGER2P43116 358 aa24.89■■□□□ 1.57
PNKP-224ENST00000631020 IFNL2Q8IZJ0 200 aa24.89■■□□□ 1.57
PNKP-224ENST00000631020 CCNL1Q9UK58 526 aaPredicted RBP24.89■■□□□ 1.57
PNKP-224ENST00000631020 TUBGCP6Q96RT7 1819 aa24.88■■□□□ 1.57
PNKP-224ENST00000631020 SULT6B1Q6IMI4 303 aa24.88■■□□□ 1.57
PNKP-224ENST00000631020 MRS2Q9HD23 443 aa24.88■■□□□ 1.57
PNKP-224ENST00000631020 HMOX1P09601 288 aa24.87■■□□□ 1.57
PNKP-224ENST00000631020 MPRIPQ6WCQ1 1025 aa24.87■■□□□ 1.57
PNKP-224ENST00000631020 SLC16A10Q8TF71 515 aa24.87■■□□□ 1.57
PNKP-224ENST00000631020 C5P01031 1676 aa24.87■■□□□ 1.57
PNKP-224ENST00000631020 PHKG2P15735 406 aa24.86■■□□□ 1.57
PNKP-224ENST00000631020 SMARCC1Q92922 1105 aaPredicted RBP24.86■■□□□ 1.57
PNKP-224ENST00000631020 TAF1LQ8IZX4 1826 aa24.86■■□□□ 1.57
PNKP-224ENST00000631020 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
PNKP-224ENST00000631020 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.579e-9■■■■■ 30
PNKP-224ENST00000631020 SGIP1Q9BQI5 828 aa24.86■■□□□ 1.57
PNKP-224ENST00000631020 PALLDQ8WX93 1383 aa24.85■■□□□ 1.57
PNKP-224ENST00000631020 COL24A1Q17RW2 1714 aa24.85■■□□□ 1.57
PNKP-224ENST00000631020 ATF5Q9Y2D1 282 aaPredicted RBP24.85■■□□□ 1.57
PNKP-224ENST00000631020 KDRP35968 1356 aa24.85■■□□□ 1.57
PNKP-224ENST00000631020 CCER2I3L3R5 266 aa24.84■■□□□ 1.57
PNKP-224ENST00000631020 PNPLA7Q6ZV29 1317 aa24.84■■□□□ 1.57
PNKP-224ENST00000631020 KCNQ4P56696 695 aa24.83■■□□□ 1.57
PNKP-224ENST00000631020 AMOTQ4VCS5 1084 aa24.83■■□□□ 1.57
PNKP-224ENST00000631020 PNISRQ8TF01 805 aaKnown RBP24.83■■□□□ 1.57
PNKP-224ENST00000631020 TFCP2L1Q9NZI6 479 aa24.83■■□□□ 1.57
PNKP-224ENST00000631020 PIGBQ92521 554 aa24.82■■□□□ 1.56
PNKP-224ENST00000631020 HSP90AB1P08238 724 aaKnown RBP24.81■■□□□ 1.56
PNKP-224ENST00000631020 PLEKHO1Q53GL0 409 aaPredicted RBP24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms