RNA–Protein interactions for RNA: ENST00000630813.1

CHD2-220, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2

Gene CHD2, Length 452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-220ENST00000630813 DLC1Q96QB1 1528 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 COL3A1P02461 1466 aaPredicted RBP5.86□□□□□ -1.47
CHD2-220ENST00000630813 EVC2Q86UK5 1308 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 APAF1O14727 1248 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 PLIN1O60240 522 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 SLFN5Q08AF3 891 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 FAM98CQ17RN3 349 aaKnown RBP5.86□□□□□ -1.47
CHD2-220ENST00000630813 C20orf194Q5TEA3 1177 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 PPP1R18Q6NYC8 613 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 RBM19Q9Y4C8 960 aaKnown RBP5.86□□□□□ -1.47
CHD2-220ENST00000630813 PCDHGA10Q9Y5H3 936 aa5.86□□□□□ -1.47
CHD2-220ENST00000630813 IQSEC2Q5JU85 1478 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 ADAMTS13Q76LX8 1427 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 ABCC11Q96J66 1382 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 FYB1O15117 783 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 ONECUT3O60422 494 aaPredicted RBP5.85□□□□□ -1.47
CHD2-220ENST00000630813 LTKP29376 864 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 TNNT2P45379 298 aaPredicted RBP5.85□□□□□ -1.47
CHD2-220ENST00000630813 MTHFSP49914 203 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 MORC1Q86VD1 984 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 CDK19Q9BWU1 502 aa5.85□□□□□ -1.47
CHD2-220ENST00000630813 TNRQ92752 1358 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 NCKAP5LQ9HCH0 1330 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 FBLN1P23142 703 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 CEBPAP49715 358 aaPredicted RBP5.84□□□□□ -1.47
CHD2-220ENST00000630813 MAP3K9P80192 1104 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 WDR43Q15061 677 aaKnown RBP eCLIP5.84□□□□□ -1.47
CHD2-220ENST00000630813 TJAP1Q5JTD0 557 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 FBXW7Q969H0 707 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 UBR1Q8IWV7 1749 aa5.84□□□□□ -1.47
CHD2-220ENST00000630813 MED14O60244 1454 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 TECPR2O15040 1411 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 PTPRUQ92729 1446 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 TMEM2Q9UHN6 1383 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 CGNL1Q0VF96 1302 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 PRR36Q9H6K5 1346 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 PPP4CP60510 307 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 TYW1BQ6NUM6 668 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 CRBNQ96SW2 442 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 GGNBP2Q9H3C7 697 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 CABP1Q9NZU7 370 aa5.83□□□□□ -1.48
CHD2-220ENST00000630813 CPSF1Q10570 1443 aaKnown RBP5.82□□□□□ -1.48
CHD2-220ENST00000630813 NSD2O96028 1365 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 ATAD2Q6PL18 1390 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 ROBO2Q9HCK4 1378 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 TRIM6-TRIM34B2RNG4 842 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 SRPK2P78362 688 aaKnown RBP5.82□□□□□ -1.48
CHD2-220ENST00000630813 TXNDC2Q86VQ3 553 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 SKAP1Q86WV1 359 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 WWC1Q8IX03 1113 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 PLEKHF1Q96S99 279 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.82□□□□□ -1.48
CHD2-220ENST00000630813 POGKQ9P215 609 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 RRP7AQ9Y3A4 280 aaKnown RBP5.82□□□□□ -1.48
CHD2-220ENST00000630813 CPS1P31327 1500 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 KNDC1Q76NI1 1749 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.82□□□□□ -1.48
CHD2-220ENST00000630813 ANKRD26Q9UPS8 1709 aa5.82□□□□□ -1.48
CHD2-220ENST00000630813 PNPLA6Q8IY17 1366 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 NINLQ9Y2I6 1382 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 ADGRB2O60241 1585 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 WASLO00401 505 aaPredicted RBP5.81□□□□□ -1.48
CHD2-220ENST00000630813 PHF14O94880 888 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 PDE4AP27815 886 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 TCP11L2Q8N4U5 519 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 SIRT1Q96EB6 747 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 ARHGAP23Q9P227 1491 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 C3P01024 1663 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 FAM135BQ49AJ0 1406 aa5.81□□□□□ -1.48
CHD2-220ENST00000630813 BCAR3O75815 825 aa5.8□□□□□ -1.48
CHD2-220ENST00000630813 RUNDC1Q96C34 613 aa5.8□□□□□ -1.48
CHD2-220ENST00000630813 CCDC136Q96JN2 1154 aa5.8□□□□□ -1.48
CHD2-220ENST00000630813 MTRQ99707 1265 aa5.8□□□□□ -1.48
CHD2-220ENST00000630813 IL21Q9HBE4 155 aa5.8□□□□□ -1.48
CHD2-220ENST00000630813 TNNQ9UQP3 1299 aa5.8□□□□□ -1.48
CHD2-220ENST00000630813 KDM2BQ8NHM5 1336 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 KIF20BQ96Q89 1820 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 NKTRP30414 1462 aaKnown RBP5.79□□□□□ -1.48
CHD2-220ENST00000630813 ATP7BP35670 1465 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 POTECB2RU33 542 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 C6orf132Q5T0Z8 1188 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 NME9Q86XW9 330 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.79□□□□□ -1.48
CHD2-220ENST00000630813 TERF2IPQ9NYB0 399 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 POLKQ9UBT6 870 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 CDC42BPGQ6DT37 1551 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 PLEKHG1Q9ULL1 1385 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 SLIT1O75093 1534 aa5.79□□□□□ -1.48
CHD2-220ENST00000630813 E9PSI1 815 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 CCDC27Q2M243 656 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 PKDCCQ504Y2 493 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 PPIP5K1Q6PFW1 1433 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 MON2Q7Z3U7 1717 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.78□□□□□ -1.482e-7■■■■□ 20.5
CHD2-220ENST00000630813 HS6ST3Q8IZP7 471 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 NUDT16Q96DE0 195 aaKnown RBP5.78□□□□□ -1.48
CHD2-220ENST00000630813 AKAP12Q02952 1782 aa5.78□□□□□ -1.48
CHD2-220ENST00000630813 SSH2Q76I76 1423 aa5.77□□□□□ -1.49
CHD2-220ENST00000630813 U2AF1L5P0DN76 240 aaPredicted RBP5.77□□□□□ -1.49
CHD2-220ENST00000630813 TMPOP42166 694 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms