RNA–Protein interactions for RNA: ENST00000630422.2

CCNA1-204, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-204ENST00000630422 LY75O60449 1722 aa20.37■□□□□ 0.85
CCNA1-204ENST00000630422 SHANK3Q9BYB0 1731 aa20.37■□□□□ 0.85
CCNA1-204ENST00000630422 MAP3K19Q56UN5 1328 aa20.36■□□□□ 0.85
CCNA1-204ENST00000630422 ANKRD36BQ8N2N9 1353 aa20.36■□□□□ 0.85
CCNA1-204ENST00000630422 HOXC9P31274 260 aa20.36■□□□□ 0.85
CCNA1-204ENST00000630422 COG3Q96JB2 828 aa20.36■□□□□ 0.85
CCNA1-204ENST00000630422 AMPHP49418 695 aa20.35■□□□□ 0.85
CCNA1-204ENST00000630422 PELP1Q8IZL8 1130 aaKnown RBP20.35■□□□□ 0.85
CCNA1-204ENST00000630422 NSD2O96028 1365 aa20.35■□□□□ 0.85
CCNA1-204ENST00000630422 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
CCNA1-204ENST00000630422 C1QTNF8P60827 252 aa20.34■□□□□ 0.85
CCNA1-204ENST00000630422 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
CCNA1-204ENST00000630422 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
CCNA1-204ENST00000630422 MEGF6O75095 1541 aa20.33■□□□□ 0.84
CCNA1-204ENST00000630422 NLGN2Q8NFZ4 835 aa20.32■□□□□ 0.84
CCNA1-204ENST00000630422 TESK2Q96S53 571 aa20.32■□□□□ 0.84
CCNA1-204ENST00000630422 ST20-MTHFSA0A0A6YYL1 179 aa20.31■□□□□ 0.84
CCNA1-204ENST00000630422 CCNL1Q9UK58 526 aaPredicted RBP20.31■□□□□ 0.84
CCNA1-204ENST00000630422 MSH5O43196 834 aa20.29■□□□□ 0.84
CCNA1-204ENST00000630422 RRS1Q15050 365 aaKnown RBP20.29■□□□□ 0.84
CCNA1-204ENST00000630422 NBPF6Q5VWK0 638 aa20.29■□□□□ 0.84
CCNA1-204ENST00000630422 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
CCNA1-204ENST00000630422 NBPF4Q96M43 638 aa20.29■□□□□ 0.84
CCNA1-204ENST00000630422 USP47Q96K76 1375 aa20.27■□□□□ 0.84
CCNA1-204ENST00000630422 COL23A1Q86Y22 540 aaPredicted RBP20.26■□□□□ 0.83
CCNA1-204ENST00000630422 RTL1A6NKG5 1358 aa20.26■□□□□ 0.83
CCNA1-204ENST00000630422 GIGYF1O75420 1035 aaPredicted RBP20.25■□□□□ 0.83
CCNA1-204ENST00000630422 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
CCNA1-204ENST00000630422 C5P01031 1676 aa20.24■□□□□ 0.83
CCNA1-204ENST00000630422 FYB1O15117 783 aa20.23■□□□□ 0.83
CCNA1-204ENST00000630422 YBX3P16989 372 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCNA1-204ENST00000630422 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
CCNA1-204ENST00000630422 RAPGEF4Q8WZA2 1011 aa20.23■□□□□ 0.83
CCNA1-204ENST00000630422 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
CCNA1-204ENST00000630422 SMG6Q86US8 1419 aaKnown RBP20.22■□□□□ 0.83
CCNA1-204ENST00000630422 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
CCNA1-204ENST00000630422 TATP17735 454 aaPredicted RBP20.21■□□□□ 0.83
CCNA1-204ENST00000630422 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
CCNA1-204ENST00000630422 GRIN3BO60391 1043 aa20.2■□□□□ 0.82
CCNA1-204ENST00000630422 HSP90AB2PQ58FF8 381 aa20.2■□□□□ 0.82
CCNA1-204ENST00000630422 CEP350Q5VT06 3117 aa20.2■□□□□ 0.82
CCNA1-204ENST00000630422 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
CCNA1-204ENST00000630422 MPRIPQ6WCQ1 1025 aa20.18■□□□□ 0.82
CCNA1-204ENST00000630422 PCDH11XQ9BZA7 1347 aa20.18■□□□□ 0.82
CCNA1-204ENST00000630422 PCDH11YQ9BZA8 1340 aa20.18■□□□□ 0.82
CCNA1-204ENST00000630422 INSRP06213 1382 aa20.18■□□□□ 0.82
CCNA1-204ENST00000630422 PALLDQ8WX93 1383 aa20.18■□□□□ 0.82
CCNA1-204ENST00000630422 TMF1P82094 1093 aa20.17■□□□□ 0.82
CCNA1-204ENST00000630422 ITGB4P16144 1822 aa20.17■□□□□ 0.82
CCNA1-204ENST00000630422 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
CCNA1-204ENST00000630422 FLT4P35916 1363 aa20.16■□□□□ 0.82
CCNA1-204ENST00000630422 CYP27B1O15528 508 aa20.15■□□□□ 0.82
CCNA1-204ENST00000630422 C4BP0C0L5 1744 aa20.14■□□□□ 0.82
CCNA1-204ENST00000630422 FLAD1Q8NFF5 587 aa20.14■□□□□ 0.81
CCNA1-204ENST00000630422 CD2APQ9Y5K6 639 aa20.13■□□□□ 0.81
CCNA1-204ENST00000630422 ATP10DQ9P241 1426 aa20.12■□□□□ 0.81
CCNA1-204ENST00000630422 AMIGO3Q86WK7 504 aa20.12■□□□□ 0.81
CCNA1-204ENST00000630422 PKD1L3Q7Z443 1732 aa20.12■□□□□ 0.81
CCNA1-204ENST00000630422 KIF24Q5T7B8 1368 aa20.12■□□□□ 0.81
CCNA1-204ENST00000630422 SMIM5Q71RC9 77 aa20.11■□□□□ 0.81
CCNA1-204ENST00000630422 AK7Q96M32 723 aa20.11■□□□□ 0.81
CCNA1-204ENST00000630422 EMILIN1Q9Y6C2 1016 aa20.11■□□□□ 0.81
CCNA1-204ENST00000630422 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
CCNA1-204ENST00000630422 HMGB2P26583 209 aaKnown RBP20.11■□□□□ 0.81
CCNA1-204ENST00000630422 PHF14O94880 888 aa20.1■□□□□ 0.81
CCNA1-204ENST00000630422 SMARCC1Q92922 1105 aaPredicted RBP20.1■□□□□ 0.81
CCNA1-204ENST00000630422 PIGBQ92521 554 aa20.09■□□□□ 0.81
CCNA1-204ENST00000630422 CARD14Q9BXL6 1004 aa20.08■□□□□ 0.81
CCNA1-204ENST00000630422 PPM1GO15355 546 aaPredicted RBP20.08■□□□□ 0.8
CCNA1-204ENST00000630422 WWC3Q9ULE0 1092 aa20.08■□□□□ 0.8
CCNA1-204ENST00000630422 MAP2P11137 1827 aaKnown RBP20.07■□□□□ 0.8
CCNA1-204ENST00000630422 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.07■□□□□ 0.8
CCNA1-204ENST00000630422 NSD3Q9BZ95 1437 aa20.07■□□□□ 0.8
CCNA1-204ENST00000630422 CDCA8Q53HL2 280 aa20.06■□□□□ 0.8
CCNA1-204ENST00000630422 GPBP1L1Q9HC44 474 aaPredicted RBP20.06■□□□□ 0.8
CCNA1-204ENST00000630422 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
CCNA1-204ENST00000630422 ZNF526Q8TF50 670 aaPredicted RBP20.06■□□□□ 0.8
CCNA1-204ENST00000630422 NCAPD2Q15021 1401 aa20.05■□□□□ 0.8
CCNA1-204ENST00000630422 IGSF1Q8N6C5 1336 aa20.05■□□□□ 0.8
CCNA1-204ENST00000630422 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
CCNA1-204ENST00000630422 SPG7Q9UQ90 795 aa20.05■□□□□ 0.8
CCNA1-204ENST00000630422 ADCY9O60503 1353 aa20.04■□□□□ 0.8
CCNA1-204ENST00000630422 LOC102724428A0A0B4J2F2 783 aa20.04■□□□□ 0.8
CCNA1-204ENST00000630422 SIK1P57059 783 aa20.04■□□□□ 0.8
CCNA1-204ENST00000630422 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
CCNA1-204ENST00000630422 SSFA2P28290 1259 aa20.03■□□□□ 0.8
CCNA1-204ENST00000630422 EYA1Q99502 592 aa20.02■□□□□ 0.8
CCNA1-204ENST00000630422 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
CCNA1-204ENST00000630422 ASAP1Q9ULH1 1129 aa20.02■□□□□ 0.8
CCNA1-204ENST00000630422 WASHC2AQ641Q2 1341 aa20.01■□□□□ 0.79
CCNA1-204ENST00000630422 ITPK1Q13572 414 aa20■□□□□ 0.79
CCNA1-204ENST00000630422 GNPATO15228 680 aa20■□□□□ 0.79
CCNA1-204ENST00000630422 ATP6V1AP38606 617 aa20■□□□□ 0.79
CCNA1-204ENST00000630422 PHKG2P15735 406 aa19.98■□□□□ 0.79
CCNA1-204ENST00000630422 IFFO2Q5TF58 517 aa19.98■□□□□ 0.79
CCNA1-204ENST00000630422 IFNL2Q8IZJ0 200 aa19.98■□□□□ 0.79
CCNA1-204ENST00000630422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.98■□□□□ 0.79
CCNA1-204ENST00000630422 POLKQ9UBT6 870 aa19.97■□□□□ 0.79
CCNA1-204ENST00000630422 ATG3Q9NT62 314 aa19.96■□□□□ 0.79
CCNA1-204ENST00000630422 HSPA6P17066 643 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms