RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 CCDC9Q9Y3X0 531 aaKnown RBP8.85□□□□□ -0.99
TCF4-269ENST00000630224 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.85□□□□□ -0.99
TCF4-269ENST00000630224 A0A0G2JS52 829 aa8.84□□□□□ -0.99
TCF4-269ENST00000630224 MYT1Q01538 1121 aa8.84□□□□□ -0.99
TCF4-269ENST00000630224 NEUROD1Q13562 356 aa8.84□□□□□ -0.99
TCF4-269ENST00000630224 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
TCF4-269ENST00000630224 SEPT12Q8IYM1 358 aa8.84□□□□□ -0.99
TCF4-269ENST00000630224 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
TCF4-269ENST00000630224 PXDNQ92626 1479 aa8.83□□□□□ -1
TCF4-269ENST00000630224 NPHP3Q7Z494 1330 aa8.83□□□□□ -1
TCF4-269ENST00000630224 C6orf132Q5T0Z8 1188 aa8.83□□□□□ -1
TCF4-269ENST00000630224 ANKRD30BQ9BXX2 1392 aa8.83□□□□□ -1
TCF4-269ENST00000630224 RGPD8O14715 1765 aaPredicted RBP8.82□□□□□ -1
TCF4-269ENST00000630224 GOLGA8CPA6NN73 597 aa8.82□□□□□ -1
TCF4-269ENST00000630224 CABLES1Q8TDN4 633 aa8.82□□□□□ -1
TCF4-269ENST00000630224 SIN3AQ96ST3 1273 aa8.82□□□□□ -1
TCF4-269ENST00000630224 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
TCF4-269ENST00000630224 NBPF3Q9H094 633 aa8.82□□□□□ -1
TCF4-269ENST00000630224 STK26Q9P289 416 aa8.82□□□□□ -1
TCF4-269ENST00000630224 PLCH1Q4KWH8 1693 aa8.81□□□□□ -1
TCF4-269ENST00000630224 R3HDM1Q15032 1099 aaKnown RBP8.81□□□□□ -1
TCF4-269ENST00000630224 FAM182BQ5T319 152 aa8.81□□□□□ -1
TCF4-269ENST00000630224 SLC4A5Q9BY07 1137 aa8.81□□□□□ -1
TCF4-269ENST00000630224 VPS9D1Q9Y2B5 631 aa8.81□□□□□ -1
TCF4-269ENST00000630224 KDM2AQ9Y2K7 1162 aa8.81□□□□□ -1
TCF4-269ENST00000630224 TONSLQ96HA7 1378 aa8.81□□□□□ -1
TCF4-269ENST00000630224 SLIT2O94813 1529 aa8.8□□□□□ -1
TCF4-269ENST00000630224 USP32Q8NFA0 1604 aa8.8□□□□□ -1
TCF4-269ENST00000630224 LMOD2Q6P5Q4 547 aa8.8□□□□□ -1
TCF4-269ENST00000630224 KRT27Q7Z3Y8 459 aa8.8□□□□□ -1
TCF4-269ENST00000630224 WAPLQ7Z5K2 1190 aa8.8□□□□□ -1
TCF4-269ENST00000630224 CDC42BPGQ6DT37 1551 aa8.79□□□□□ -1
TCF4-269ENST00000630224 COL9A1P20849 921 aa8.79□□□□□ -1
TCF4-269ENST00000630224 BAG6P46379 1132 aa8.79□□□□□ -1
TCF4-269ENST00000630224 TSR1Q2NL82 804 aaKnown RBP8.79□□□□□ -1
TCF4-269ENST00000630224 MRPL50Q8N5N7 158 aaKnown RBP8.79□□□□□ -1
TCF4-269ENST00000630224 CCDC144AA2RUR9 1427 aa8.79□□□□□ -1
TCF4-269ENST00000630224 PPLO60437 1756 aa8.78□□□□□ -1
TCF4-269ENST00000630224 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
TCF4-269ENST00000630224 PROX2Q3B8N5 592 aa8.78□□□□□ -1
TCF4-269ENST00000630224 SMYD5Q6GMV2 418 aa8.78□□□□□ -1
TCF4-269ENST00000630224 KRT28Q7Z3Y7 464 aa8.78□□□□□ -1
TCF4-269ENST00000630224 SPATA31A3Q5VYP0 1347 aa8.78□□□□□ -1
TCF4-269ENST00000630224 ABCA3Q99758 1704 aa8.77□□□□□ -1
TCF4-269ENST00000630224 FMN2Q9NZ56 1722 aa8.77□□□□□ -1
TCF4-269ENST00000630224 LRPPRCP42704 1394 aaKnown RBP8.77□□□□□ -1.01
TCF4-269ENST00000630224 OSBPP22059 807 aa8.77□□□□□ -1.01
TCF4-269ENST00000630224 MLLT3P42568 568 aaPredicted RBP8.77□□□□□ -1.01
TCF4-269ENST00000630224 VPS72Q15906 364 aa8.77□□□□□ -1.01
TCF4-269ENST00000630224 RGPD1P0DJD0 1748 aa8.77□□□□□ -1.01
TCF4-269ENST00000630224 NWD2Q9ULI1 1742 aa8.77□□□□□ -1.01
TCF4-269ENST00000630224 PLEKHH1Q9ULM0 1364 aa8.76□□□□□ -1.01
TCF4-269ENST00000630224 TULP1O00294 542 aaPredicted RBP8.76□□□□□ -1.01
TCF4-269ENST00000630224 SEMA3EO15041 775 aa8.76□□□□□ -1.01
TCF4-269ENST00000630224 HRO43593 1189 aa8.76□□□□□ -1.01
TCF4-269ENST00000630224 YY1P25490 414 aa8.76□□□□□ -1.01
TCF4-269ENST00000630224 TMEM132EQ6IEE7 984 aa8.76□□□□□ -1.01
TCF4-269ENST00000630224 RABGEF1Q9UJ41 708 aa8.76□□□□□ -1.01
TCF4-269ENST00000630224 KIF1AQ12756 1690 aa8.75□□□□□ -1.01
TCF4-269ENST00000630224 IFT172Q9UG01 1749 aa8.75□□□□□ -1.01
TCF4-269ENST00000630224 KCTD12Q96CX2 325 aaKnown RBP8.75□□□□□ -1.01
TCF4-269ENST00000630224 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
TCF4-269ENST00000630224 TNS1Q9HBL0 1735 aaKnown RBP8.74□□□□□ -1.01
TCF4-269ENST00000630224 FAM83GA6ND36 823 aa8.74□□□□□ -1.01
TCF4-269ENST00000630224 TRIM6-TRIM34B2RNG4 842 aa8.74□□□□□ -1.01
TCF4-269ENST00000630224 ONECUT3O60422 494 aaPredicted RBP8.74□□□□□ -1.01
TCF4-269ENST00000630224 EZH2Q15910 746 aaKnown RBP8.74□□□□□ -1.01
TCF4-269ENST00000630224 PACS2Q86VP3 889 aa8.74□□□□□ -1.01
TCF4-269ENST00000630224 ADGRF5Q8IZF2 1346 aa8.74□□□□□ -1.01
TCF4-269ENST00000630224 TNS3Q68CZ2 1445 aa8.73□□□□□ -1.01
TCF4-269ENST00000630224 RGL3Q3MIN7 710 aa8.73□□□□□ -1.01
TCF4-269ENST00000630224 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
TCF4-269ENST00000630224 CDHR5Q9HBB8 845 aa8.73□□□□□ -1.01
TCF4-269ENST00000630224 BTG4Q9NY30 223 aa8.73□□□□□ -1.01
TCF4-269ENST00000630224 KIAA1468Q9P260 1216 aa8.73□□□□□ -1.01
TCF4-269ENST00000630224 PRAG1Q86YV5 1406 aa8.72□□□□□ -1.01
TCF4-269ENST00000630224 PSME1Q06323 249 aa8.72□□□□□ -1.01
TCF4-269ENST00000630224 SAFB2Q14151 953 aaKnown RBP eCLIP8.72□□□□□ -1.01
TCF4-269ENST00000630224 PMFBP1Q8TBY8 1022 aa8.72□□□□□ -1.01
TCF4-269ENST00000630224 TRIM37O94972 964 aa8.71□□□□□ -1.02
TCF4-269ENST00000630224 PRSS12P56730 875 aa8.71□□□□□ -1.02
TCF4-269ENST00000630224 WNT2BQ93097 391 aa8.71□□□□□ -1.02
TCF4-269ENST00000630224 CDCA7LQ96GN5 454 aa8.71□□□□□ -1.02
TCF4-269ENST00000630224 CAMTA1Q9Y6Y1 1673 aa8.71□□□□□ -1.02
TCF4-269ENST00000630224 NBPF26B4DH59 902 aa8.7□□□□□ -1.02
TCF4-269ENST00000630224 BHMG1C9JSJ3 638 aaPredicted RBP8.7□□□□□ -1.02
TCF4-269ENST00000630224 PRIM1P49642 420 aaKnown RBP8.7□□□□□ -1.02
TCF4-269ENST00000630224 HCSTQ9UBK5 93 aa8.7□□□□□ -1.02
TCF4-269ENST00000630224 KNDC1Q76NI1 1749 aa8.7□□□□□ -1.02
TCF4-269ENST00000630224 RPGRIP1LQ68CZ1 1315 aa8.7□□□□□ -1.02
TCF4-269ENST00000630224 COL14A1Q05707 1796 aaKnown RBP8.69□□□□□ -1.02
TCF4-269ENST00000630224 TESPA1A2RU30 521 aaPredicted RBP8.69□□□□□ -1.02
TCF4-269ENST00000630224 APBA3O96018 575 aa8.69□□□□□ -1.02
TCF4-269ENST00000630224 LAPTM4BQ86VI4 370 aa8.69□□□□□ -1.02
TCF4-269ENST00000630224 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
TCF4-269ENST00000630224 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
TCF4-269ENST00000630224 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
TCF4-269ENST00000630224 SEPT9Q9UHD8 586 aaPredicted RBP8.69□□□□□ -1.02
TCF4-269ENST00000630224 CAMKK2Q96RR4 588 aa8.68□□□□□ -1.02
TCF4-269ENST00000630224 RBM27Q9P2N5 1060 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms