RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 GPT2Q8TD30 523 aa23.06■■□□□ 1.28
MECP2-218ENST00000629277 ANP32BQ92688 251 aaKnown RBP23.06■■□□□ 1.28
MECP2-218ENST00000629277 MSH6P52701 1360 aa23.06■■□□□ 1.28
MECP2-218ENST00000629277 LMOD3Q0VAK6 560 aa23.05■■□□□ 1.28
MECP2-218ENST00000629277 ZNF445P59923 1031 aa23.05■■□□□ 1.28
MECP2-218ENST00000629277 RGS12O14924 1447 aa23.05■■□□□ 1.28
MECP2-218ENST00000629277 IBTKQ9P2D0 1353 aaPredicted RBP23.04■■□□□ 1.28
MECP2-218ENST00000629277 TSHZ3Q63HK5 1081 aa23.04■■□□□ 1.28
MECP2-218ENST00000629277 COG3Q96JB2 828 aa23.04■■□□□ 1.28
MECP2-218ENST00000629277 NSFL1CQ9UNZ2 370 aaKnown RBP23.04■■□□□ 1.28
MECP2-218ENST00000629277 VSIG10Q8N0Z9 540 aa23.03■■□□□ 1.28
MECP2-218ENST00000629277 ATP7BP35670 1465 aa23.03■■□□□ 1.28
MECP2-218ENST00000629277 MIS18AQ9NYP9 233 aa23.03■■□□□ 1.28
MECP2-218ENST00000629277 SULT6B1Q6IMI4 303 aa23.02■■□□□ 1.28
MECP2-218ENST00000629277 RTL1A6NKG5 1358 aa23.02■■□□□ 1.28
MECP2-218ENST00000629277 PREX1Q8TCU6 1659 aa23.02■■□□□ 1.28
MECP2-218ENST00000629277 ST18O60284 1047 aa23.01■■□□□ 1.27
MECP2-218ENST00000629277 CDK12Q9NYV4 1490 aaPredicted RBP23.01■■□□□ 1.27
MECP2-218ENST00000629277 WASLO00401 505 aaPredicted RBP23.01■■□□□ 1.27
MECP2-218ENST00000629277 TXNDC2Q86VQ3 553 aa23.01■■□□□ 1.27
MECP2-218ENST00000629277 RPAP2Q8IXW5 612 aaPredicted RBP23.01■■□□□ 1.27
MECP2-218ENST00000629277 MSNP26038 577 aaKnown RBP23■■□□□ 1.27
MECP2-218ENST00000629277 DLG5Q8TDM6 1919 aa23■■□□□ 1.27
MECP2-218ENST00000629277 CPSF1Q10570 1443 aaKnown RBP23■■□□□ 1.27
MECP2-218ENST00000629277 EDC4Q6P2E9 1401 aaKnown RBP23■■□□□ 1.27
MECP2-218ENST00000629277 CPS1P31327 1500 aa23■■□□□ 1.27
MECP2-218ENST00000629277 REREQ9P2R6 1566 aa23■■□□□ 1.27
MECP2-218ENST00000629277 KIF24Q5T7B8 1368 aa22.99■■□□□ 1.27
MECP2-218ENST00000629277 F6X3S4 739 aa22.99■■□□□ 1.27
MECP2-218ENST00000629277 CASC1Q6TDU7 716 aa22.99■■□□□ 1.27
MECP2-218ENST00000629277 GLIPR1L2Q4G1C9 344 aa22.98■■□□□ 1.27
MECP2-218ENST00000629277 NUDT16Q96DE0 195 aaKnown RBP22.98■■□□□ 1.27
MECP2-218ENST00000629277 TMEM63CQ9P1W3 806 aa22.98■■□□□ 1.27
MECP2-218ENST00000629277 SLC4A10Q6U841 1118 aa22.98■■□□□ 1.27
MECP2-218ENST00000629277 SLC4A2P04920 1241 aa22.97■■□□□ 1.27
MECP2-218ENST00000629277 EIF4A2Q14240 407 aaKnown RBP22.97■■□□□ 1.27
MECP2-218ENST00000629277 CWC22Q9HCG8 908 aaKnown RBP22.97■■□□□ 1.27
MECP2-218ENST00000629277 SYCE3A1L190 88 aa22.97■■□□□ 1.27
MECP2-218ENST00000629277 NOL8Q76FK4 1167 aaKnown RBP22.97■■□□□ 1.27
MECP2-218ENST00000629277 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.97■■□□□ 1.27
MECP2-218ENST00000629277 NEO1Q92859 1461 aa22.97■■□□□ 1.27
MECP2-218ENST00000629277 CHL1O00533 1208 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 AATKQ6ZMQ8 1374 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 ERC2O15083 957 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 OFD1O75665 1012 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 TPM2P07951 284 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 G2E3Q7L622 706 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 SOX12O15370 315 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 NEK4P51957 841 aa22.96■■□□□ 1.27
MECP2-218ENST00000629277 REC8O95072 547 aa22.95■■□□□ 1.26
MECP2-218ENST00000629277 XPCQ01831 940 aaPredicted RBP22.95■■□□□ 1.26
MECP2-218ENST00000629277 EXOC6BQ9Y2D4 811 aa22.95■■□□□ 1.26
MECP2-218ENST00000629277 PDE1AP54750 535 aa22.94■■□□□ 1.26
MECP2-218ENST00000629277 FOXD4L6Q3SYB3 417 aaPredicted RBP22.94■■□□□ 1.26
MECP2-218ENST00000629277 FOXD4L3Q6VB84 417 aaPredicted RBP22.94■■□□□ 1.26
MECP2-218ENST00000629277 RBM10P98175 930 aaKnown RBP22.93■■□□□ 1.26
MECP2-218ENST00000629277 RNF214Q8ND24 703 aa22.93■■□□□ 1.26
MECP2-218ENST00000629277 TMX3Q96JJ7 454 aa22.93■■□□□ 1.26
MECP2-218ENST00000629277 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.93■■□□□ 1.26
MECP2-218ENST00000629277 ZMYND15Q9H091 742 aa22.93■■□□□ 1.26
MECP2-218ENST00000629277 PALD1Q9ULE6 856 aa22.93■■□□□ 1.26
MECP2-218ENST00000629277 R3HCC1Q9Y3T6 440 aaKnown RBP22.93■■□□□ 1.26
MECP2-218ENST00000629277 METP08581 1390 aa22.92■■□□□ 1.26
MECP2-218ENST00000629277 NUTM2FA1L443 756 aa22.92■■□□□ 1.26
MECP2-218ENST00000629277 FOXO3O43524 673 aa22.92■■□□□ 1.26
MECP2-218ENST00000629277 PDLIM2Q96JY6 352 aa22.92■■□□□ 1.26
MECP2-218ENST00000629277 HSP90AB2PQ58FF8 381 aa22.92■■□□□ 1.26
MECP2-218ENST00000629277 CCDC61Q9Y6R9 512 aa22.92■■□□□ 1.26
MECP2-218ENST00000629277 NOL7Q9UMY1 257 aaKnown RBP22.91■■□□□ 1.26
MECP2-218ENST00000629277 PTPRCP08575 1304 aa22.89■■□□□ 1.26
MECP2-218ENST00000629277 LRSAM1Q6UWE0 723 aa22.89■■□□□ 1.25
MECP2-218ENST00000629277 MLECQ14165 292 aa22.89■■□□□ 1.25
MECP2-218ENST00000629277 RICTORQ6R327 1708 aa22.88■■□□□ 1.25
MECP2-218ENST00000629277 PRR36Q9H6K5 1346 aa22.88■■□□□ 1.25
MECP2-218ENST00000629277 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.88■■□□□ 1.25
MECP2-218ENST00000629277 A2ML1A8K2U0 1454 aa22.87■■□□□ 1.25
MECP2-218ENST00000629277 DLC1Q96QB1 1528 aa22.87■■□□□ 1.25
MECP2-218ENST00000629277 PKNOX2Q96KN3 472 aa22.87■■□□□ 1.25
MECP2-218ENST00000629277 GDPD2Q9HCC8 539 aa22.87■■□□□ 1.25
MECP2-218ENST00000629277 RIMBP3CA6NJZ7 1639 aa22.86■■□□□ 1.25
MECP2-218ENST00000629277 RIMBP3BA6NNM3 1639 aa22.86■■□□□ 1.25
MECP2-218ENST00000629277 RIMBP3Q9UFD9 1639 aa22.86■■□□□ 1.25
MECP2-218ENST00000629277 HMMRO75330 724 aa22.86■■□□□ 1.25
MECP2-218ENST00000629277 RILPL2Q969X0 211 aa22.86■■□□□ 1.25
MECP2-218ENST00000629277 KIAA0232Q92628 1395 aa22.85■■□□□ 1.25
MECP2-218ENST00000629277 NECTIN2Q92692 538 aa22.85■■□□□ 1.25
MECP2-218ENST00000629277 ESYT1Q9BSJ8 1104 aa22.85■■□□□ 1.25
MECP2-218ENST00000629277 UPF3BQ9BZI7 483 aaKnown RBP22.85■■□□□ 1.25
MECP2-218ENST00000629277 OSBPL3Q9H4L5 887 aa22.85■■□□□ 1.25
MECP2-218ENST00000629277 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
MECP2-218ENST00000629277 ANO2Q9NQ90 1003 aa22.85■■□□□ 1.25
MECP2-218ENST00000629277 PNMA6EA0A0J9YXQ4 647 aa22.84■■□□□ 1.25
MECP2-218ENST00000629277 ZBTB7CA1YPR0 619 aa22.84■■□□□ 1.25
MECP2-218ENST00000629277 HS1BP3Q53T59 392 aa22.84■■□□□ 1.25
MECP2-218ENST00000629277 TRIM6-TRIM34B2RNG4 842 aa22.84■■□□□ 1.25
MECP2-218ENST00000629277 BRD1O95696 1058 aa22.84■■□□□ 1.25
MECP2-218ENST00000629277 HAP1P54257 671 aaPredicted RBP22.84■■□□□ 1.25
MECP2-218ENST00000629277 ZNF500O60304 480 aaPredicted RBP22.83■■□□□ 1.25
MECP2-218ENST00000629277 TPRNQ4KMQ1 711 aa22.83■■□□□ 1.25
MECP2-218ENST00000629277 UNC5CLQ8IV45 518 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms