RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 USP47Q96K76 1375 aa18.89■□□□□ 0.61
TCF4-262ENST00000628078 MEGF6O75095 1541 aa18.89■□□□□ 0.61
TCF4-262ENST00000628078 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
TCF4-262ENST00000628078 DOT1LQ8TEK3 1739 aa18.88■□□□□ 0.61
TCF4-262ENST00000628078 TRIM26Q12899 539 aaPredicted RBP18.88■□□□□ 0.61
TCF4-262ENST00000628078 HSP90AB2PQ58FF8 381 aa18.88■□□□□ 0.61
TCF4-262ENST00000628078 TFCP2L1Q9NZI6 479 aa18.88■□□□□ 0.61
TCF4-262ENST00000628078 SHANK3Q9BYB0 1731 aa18.86■□□□□ 0.61
TCF4-262ENST00000628078 PNPLA7Q6ZV29 1317 aa18.86■□□□□ 0.61
TCF4-262ENST00000628078 MSH5O43196 834 aa18.86■□□□□ 0.61
TCF4-262ENST00000628078 SLC24A1O60721 1099 aa18.86■□□□□ 0.61
TCF4-262ENST00000628078 SLC27A3Q5K4L6 730 aa18.86■□□□□ 0.61
TCF4-262ENST00000628078 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
TCF4-262ENST00000628078 NSD2O96028 1365 aa18.84■□□□□ 0.61
TCF4-262ENST00000628078 PELP1Q8IZL8 1130 aaKnown RBP18.84■□□□□ 0.61
TCF4-262ENST00000628078 CARD14Q9BXL6 1004 aa18.84■□□□□ 0.61
TCF4-262ENST00000628078 CCNL1Q9UK58 526 aaPredicted RBP18.84■□□□□ 0.61
TCF4-262ENST00000628078 PPM1GO15355 546 aaPredicted RBP18.83■□□□□ 0.6
TCF4-262ENST00000628078 TATP17735 454 aaPredicted RBP18.83■□□□□ 0.6
TCF4-262ENST00000628078 POLR3GLQ9BT43 218 aa18.83■□□□□ 0.6
TCF4-262ENST00000628078 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
TCF4-262ENST00000628078 GPR162Q16538 588 aa18.82■□□□□ 0.6
TCF4-262ENST00000628078 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
TCF4-262ENST00000628078 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
TCF4-262ENST00000628078 POLD1P28340 1107 aa18.81■□□□□ 0.6
TCF4-262ENST00000628078 ZNF784Q8NCA9 323 aaPredicted RBP18.81■□□□□ 0.6
TCF4-262ENST00000628078 LY75O60449 1722 aa18.8■□□□□ 0.6
TCF4-262ENST00000628078 MPRIPQ6WCQ1 1025 aa18.8■□□□□ 0.6
TCF4-262ENST00000628078 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
TCF4-262ENST00000628078 RTL1A6NKG5 1358 aa18.8■□□□□ 0.6
TCF4-262ENST00000628078 MSL1Q68DK7 614 aa18.79■□□□□ 0.6
TCF4-262ENST00000628078 COL23A1Q86Y22 540 aaPredicted RBP18.79■□□□□ 0.6
TCF4-262ENST00000628078 SLC16A10Q8TF71 515 aa18.79■□□□□ 0.6
TCF4-262ENST00000628078 SMG6Q86US8 1419 aaKnown RBP18.79■□□□□ 0.6
TCF4-262ENST00000628078 CDCA8Q53HL2 280 aa18.78■□□□□ 0.6
TCF4-262ENST00000628078 NLGN2Q8NFZ4 835 aa18.78■□□□□ 0.6
TCF4-262ENST00000628078 INSRP06213 1382 aa18.78■□□□□ 0.6
TCF4-262ENST00000628078 NSD3Q9BZ95 1437 aa18.77■□□□□ 0.6
TCF4-262ENST00000628078 SMIM5Q71RC9 77 aa18.77■□□□□ 0.6
TCF4-262ENST00000628078 CHD4Q14839 1912 aa18.76■□□□□ 0.59
TCF4-262ENST00000628078 CYP27B1O15528 508 aa18.76■□□□□ 0.59
TCF4-262ENST00000628078 QSER1Q2KHR3 1735 aa18.76■□□□□ 0.59
TCF4-262ENST00000628078 TNNT2P45379 298 aaPredicted RBP18.75■□□□□ 0.59
TCF4-262ENST00000628078 FLT4P35916 1363 aa18.75■□□□□ 0.59
TCF4-262ENST00000628078 CGNL1Q0VF96 1302 aa18.74■□□□□ 0.59
TCF4-262ENST00000628078 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
TCF4-262ENST00000628078 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
TCF4-262ENST00000628078 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
TCF4-262ENST00000628078 PALLDQ8WX93 1383 aa18.71■□□□□ 0.59
TCF4-262ENST00000628078 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
TCF4-262ENST00000628078 ITGB4P16144 1822 aa18.71■□□□□ 0.59
TCF4-262ENST00000628078 PHF14O94880 888 aa18.7■□□□□ 0.58
TCF4-262ENST00000628078 COL24A1Q17RW2 1714 aa18.7■□□□□ 0.58
TCF4-262ENST00000628078 AMIGO3Q86WK7 504 aa18.7■□□□□ 0.58
TCF4-262ENST00000628078 PIGBQ92521 554 aa18.7■□□□□ 0.58
TCF4-262ENST00000628078 EYA1Q99502 592 aa18.7■□□□□ 0.58
TCF4-262ENST00000628078 C5P01031 1676 aa18.69■□□□□ 0.58
TCF4-262ENST00000628078 TOGARAM1Q9Y4F4 1720 aa18.69■□□□□ 0.58
TCF4-262ENST00000628078 UTRNP46939 3433 aa18.69■□□□□ 0.58
TCF4-262ENST00000628078 TAF1LQ8IZX4 1826 aa18.68■□□□□ 0.58
TCF4-262ENST00000628078 YBX3P16989 372 aaKnown RBP eCLIP18.68■□□□□ 0.58
TCF4-262ENST00000628078 POLKQ9UBT6 870 aa18.68■□□□□ 0.58
TCF4-262ENST00000628078 WWC3Q9ULE0 1092 aa18.68■□□□□ 0.58
TCF4-262ENST00000628078 SPG7Q9UQ90 795 aa18.67■□□□□ 0.58
TCF4-262ENST00000628078 KIF24Q5T7B8 1368 aa18.67■□□□□ 0.58
TCF4-262ENST00000628078 AK7Q96M32 723 aa18.66■□□□□ 0.58
TCF4-262ENST00000628078 WASHC2AQ641Q2 1341 aa18.66■□□□□ 0.58
TCF4-262ENST00000628078 SMARCC1Q92922 1105 aaPredicted RBP18.65■□□□□ 0.58
TCF4-262ENST00000628078 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
TCF4-262ENST00000628078 PKD1L3Q7Z443 1732 aa18.64■□□□□ 0.57
TCF4-262ENST00000628078 C4BP0C0L5 1744 aa18.63■□□□□ 0.57
TCF4-262ENST00000628078 SENP3-EIF4A1A0A087X0R7 540 aa18.63■□□□□ 0.57
TCF4-262ENST00000628078 EIF4A2Q14240 407 aaKnown RBP18.63■□□□□ 0.57
TCF4-262ENST00000628078 NKX1-1Q15270 411 aaPredicted RBP18.63■□□□□ 0.57
TCF4-262ENST00000628078 LINC00116Q8NCU8 138 aa18.63■□□□□ 0.57
TCF4-262ENST00000628078 TMOD3Q9NYL9 352 aa18.63■□□□□ 0.57
TCF4-262ENST00000628078 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.62■□□□□ 0.57
TCF4-262ENST00000628078 LOC102724428A0A0B4J2F2 783 aa18.62■□□□□ 0.57
TCF4-262ENST00000628078 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
TCF4-262ENST00000628078 SIK1P57059 783 aa18.62■□□□□ 0.57
TCF4-262ENST00000628078 C1QTNF8P60827 252 aa18.62■□□□□ 0.57
TCF4-262ENST00000628078 PANK3Q9H999 370 aa18.62■□□□□ 0.57
TCF4-262ENST00000628078 TIMELESSQ9UNS1 1208 aa18.62■□□□□ 0.57
TCF4-262ENST00000628078 PHKG2P15735 406 aa18.61■□□□□ 0.57
TCF4-262ENST00000628078 ITPK1Q13572 414 aa18.61■□□□□ 0.57
TCF4-262ENST00000628078 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
TCF4-262ENST00000628078 FLAD1Q8NFF5 587 aa18.61■□□□□ 0.57
TCF4-262ENST00000628078 ATP6V1AP38606 617 aa18.6■□□□□ 0.57
TCF4-262ENST00000628078 ANKRD26Q9UPS8 1709 aa18.6■□□□□ 0.57
TCF4-262ENST00000628078 GRIN3BO60391 1043 aa18.59■□□□□ 0.57
TCF4-262ENST00000628078 ATG3Q9NT62 314 aa18.59■□□□□ 0.57
TCF4-262ENST00000628078 UBR3Q6ZT12 1888 aa18.58■□□□□ 0.57
TCF4-262ENST00000628078 NCAPD2Q15021 1401 aa18.58■□□□□ 0.57
TCF4-262ENST00000628078 GNPATO15228 680 aa18.58■□□□□ 0.56
TCF4-262ENST00000628078 EIF4G2P78344 907 aaKnown RBP eCLIP18.58■□□□□ 0.563e-7■■■■■ 40.1
TCF4-262ENST00000628078 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
TCF4-262ENST00000628078 RBM42Q9BTD8 480 aaKnown RBP18.57■□□□□ 0.56
TCF4-262ENST00000628078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.57■□□□□ 0.56
TCF4-262ENST00000628078 CD2APQ9Y5K6 639 aa18.57■□□□□ 0.56
TCF4-262ENST00000628078 ZNF526Q8TF50 670 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms