RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 QSER1Q2KHR3 1735 aa23.98■■□□□ 1.43
TCF4-261ENST00000627784 GIGYF1O75420 1035 aaPredicted RBP23.98■■□□□ 1.43
TCF4-261ENST00000627784 YBX3P16989 372 aaKnown RBP eCLIP23.98■■□□□ 1.43
TCF4-261ENST00000627784 ANKRD36BQ8N2N9 1353 aa23.98■■□□□ 1.43
TCF4-261ENST00000627784 TERF2IPQ9NYB0 399 aa23.97■■□□□ 1.43
TCF4-261ENST00000627784 MAP3K19Q56UN5 1328 aa23.95■■□□□ 1.42
TCF4-261ENST00000627784 HOXC9P31274 260 aa23.95■■□□□ 1.42
TCF4-261ENST00000627784 COL23A1Q86Y22 540 aaPredicted RBP23.95■■□□□ 1.42
TCF4-261ENST00000627784 SHANK3Q9BYB0 1731 aa23.95■■□□□ 1.42
TCF4-261ENST00000627784 ZCRB1Q8TBF4 217 aaKnown RBP23.94■■□□□ 1.42
TCF4-261ENST00000627784 CCNL1Q9UK58 526 aaPredicted RBP23.94■■□□□ 1.42
TCF4-261ENST00000627784 DOT1LQ8TEK3 1739 aa23.93■■□□□ 1.42
TCF4-261ENST00000627784 MEGF6O75095 1541 aa23.93■■□□□ 1.42
TCF4-261ENST00000627784 LY75O60449 1722 aa23.93■■□□□ 1.42
TCF4-261ENST00000627784 FAM208AQ9UK61 1670 aaKnown RBP23.92■■□□□ 1.42
TCF4-261ENST00000627784 MSH5O43196 834 aa23.92■■□□□ 1.42
TCF4-261ENST00000627784 MSL1Q68DK7 614 aa23.92■■□□□ 1.42
TCF4-261ENST00000627784 RGPD2P0DJD1 1756 aa23.91■■□□□ 1.42
TCF4-261ENST00000627784 AMPHP49418 695 aa23.9■■□□□ 1.42
TCF4-261ENST00000627784 NBPF6Q5VWK0 638 aa23.89■■□□□ 1.41
TCF4-261ENST00000627784 COG3Q96JB2 828 aa23.89■■□□□ 1.41
TCF4-261ENST00000627784 NBPF4Q96M43 638 aa23.89■■□□□ 1.41
TCF4-261ENST00000627784 USHBP1Q8N6Y0 703 aa23.88■■□□□ 1.41
TCF4-261ENST00000627784 PUS7Q96PZ0 661 aaKnown RBP23.88■■□□□ 1.41
TCF4-261ENST00000627784 RRS1Q15050 365 aaKnown RBP23.87■■□□□ 1.41
TCF4-261ENST00000627784 GRIN3BO60391 1043 aa23.86■■□□□ 1.41
TCF4-261ENST00000627784 TESK2Q96S53 571 aa23.86■■□□□ 1.41
TCF4-261ENST00000627784 USP47Q96K76 1375 aa23.86■■□□□ 1.41
TCF4-261ENST00000627784 IFFO2Q5TF58 517 aa23.83■■□□□ 1.41
TCF4-261ENST00000627784 ATP10DQ9P241 1426 aa23.82■■□□□ 1.4
TCF4-261ENST00000627784 ST20-MTHFSA0A0A6YYL1 179 aa23.81■■□□□ 1.4
TCF4-261ENST00000627784 AMIGO3Q86WK7 504 aa23.81■■□□□ 1.4
TCF4-261ENST00000627784 SMIM5Q71RC9 77 aa23.8■■□□□ 1.4
TCF4-261ENST00000627784 FYB1O15117 783 aa23.79■■□□□ 1.4
TCF4-261ENST00000627784 GGNBP2Q9H3C7 697 aa23.79■■□□□ 1.4
TCF4-261ENST00000627784 RAPGEF4Q8WZA2 1011 aa23.78■■□□□ 1.4
TCF4-261ENST00000627784 CD2APQ9Y5K6 639 aa23.78■■□□□ 1.4
TCF4-261ENST00000627784 HSP90AB2PQ58FF8 381 aa23.77■■□□□ 1.4
TCF4-261ENST00000627784 MPRIPQ6WCQ1 1025 aa23.77■■□□□ 1.4
TCF4-261ENST00000627784 WWC3Q9ULE0 1092 aa23.77■■□□□ 1.4
TCF4-261ENST00000627784 RTL1A6NKG5 1358 aa23.77■■□□□ 1.4
TCF4-261ENST00000627784 C5P01031 1676 aa23.76■■□□□ 1.39
TCF4-261ENST00000627784 CGNL1Q0VF96 1302 aa23.76■■□□□ 1.39
TCF4-261ENST00000627784 PALLDQ8WX93 1383 aa23.76■■□□□ 1.39
TCF4-261ENST00000627784 CYP27B1O15528 508 aa23.75■■□□□ 1.39
TCF4-261ENST00000627784 TATP17735 454 aaPredicted RBP23.75■■□□□ 1.39
TCF4-261ENST00000627784 ZNF526Q8TF50 670 aaPredicted RBP23.75■■□□□ 1.39
TCF4-261ENST00000627784 GPBP1L1Q9HC44 474 aaPredicted RBP23.74■■□□□ 1.39
TCF4-261ENST00000627784 TONSLQ96HA7 1378 aa23.73■■□□□ 1.39
TCF4-261ENST00000627784 PCDH11XQ9BZA7 1347 aa23.72■■□□□ 1.39
TCF4-261ENST00000627784 PCDH11YQ9BZA8 1340 aa23.72■■□□□ 1.39
TCF4-261ENST00000627784 ADCY9O60503 1353 aa23.72■■□□□ 1.39
TCF4-261ENST00000627784 TAF1LQ8IZX4 1826 aa23.71■■□□□ 1.39
TCF4-261ENST00000627784 FLAD1Q8NFF5 587 aa23.71■■□□□ 1.39
TCF4-261ENST00000627784 PHF14O94880 888 aa23.7■■□□□ 1.38
TCF4-261ENST00000627784 SMG6Q86US8 1419 aaKnown RBP23.69■■□□□ 1.38
TCF4-261ENST00000627784 INSRP06213 1382 aa23.69■■□□□ 1.38
TCF4-261ENST00000627784 C4BP0C0L5 1744 aa23.69■■□□□ 1.38
TCF4-261ENST00000627784 TOGARAM1Q9Y4F4 1720 aa23.69■■□□□ 1.38
TCF4-261ENST00000627784 IGSF1Q8N6C5 1336 aa23.68■■□□□ 1.38
TCF4-261ENST00000627784 PIGBQ92521 554 aa23.68■■□□□ 1.38
TCF4-261ENST00000627784 AK7Q96M32 723 aa23.68■■□□□ 1.38
TCF4-261ENST00000627784 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.67■■□□□ 1.38
TCF4-261ENST00000627784 HSPA6P17066 643 aa23.66■■□□□ 1.38
TCF4-261ENST00000627784 LINC00116Q8NCU8 138 aa23.65■■□□□ 1.38
TCF4-261ENST00000627784 FLT4P35916 1363 aa23.65■■□□□ 1.38
TCF4-261ENST00000627784 ITGB4P16144 1822 aa23.64■■□□□ 1.38
TCF4-261ENST00000627784 SMARCC1Q92922 1105 aaPredicted RBP23.64■■□□□ 1.37
TCF4-261ENST00000627784 EMILIN1Q9Y6C2 1016 aa23.64■■□□□ 1.37
TCF4-261ENST00000627784 UBR3Q6ZT12 1888 aa23.63■■□□□ 1.37
TCF4-261ENST00000627784 NKX1-1Q15270 411 aaPredicted RBP23.62■■□□□ 1.37
TCF4-261ENST00000627784 LOC102724428A0A0B4J2F2 783 aa23.61■■□□□ 1.37
TCF4-261ENST00000627784 SIK1P57059 783 aa23.61■■□□□ 1.37
TCF4-261ENST00000627784 ITPK1Q13572 414 aa23.61■■□□□ 1.37
TCF4-261ENST00000627784 CARD14Q9BXL6 1004 aa23.61■■□□□ 1.37
TCF4-261ENST00000627784 KIF3CO14782 793 aa23.6■■□□□ 1.37
TCF4-261ENST00000627784 SLC24A1O60721 1099 aa23.6■■□□□ 1.37
TCF4-261ENST00000627784 HMGB2P26583 209 aaKnown RBP23.6■■□□□ 1.37
TCF4-261ENST00000627784 ASAP1Q9ULH1 1129 aa23.6■■□□□ 1.37
TCF4-261ENST00000627784 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
TCF4-261ENST00000627784 SSFA2P28290 1259 aa23.59■■□□□ 1.37
TCF4-261ENST00000627784 TMF1P82094 1093 aa23.59■■□□□ 1.37
TCF4-261ENST00000627784 KIF24Q5T7B8 1368 aa23.58■■□□□ 1.37
TCF4-261ENST00000627784 PKD1L3Q7Z443 1732 aa23.58■■□□□ 1.37
TCF4-261ENST00000627784 PPM1GO15355 546 aaPredicted RBP23.57■■□□□ 1.36
TCF4-261ENST00000627784 GNPATO15228 680 aa23.56■■□□□ 1.36
TCF4-261ENST00000627784 NCAPD2Q15021 1401 aa23.56■■□□□ 1.36
TCF4-261ENST00000627784 KIF20BQ96Q89 1820 aa23.55■■□□□ 1.36
TCF4-261ENST00000627784 ATP6V1AP38606 617 aa23.55■■□□□ 1.36
TCF4-261ENST00000627784 EYA1Q99502 592 aa23.55■■□□□ 1.36
TCF4-261ENST00000627784 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
TCF4-261ENST00000627784 NSD3Q9BZ95 1437 aa23.54■■□□□ 1.36
TCF4-261ENST00000627784 MMP10P09238 476 aa23.54■■□□□ 1.36
TCF4-261ENST00000627784 TMOD3Q9NYL9 352 aa23.54■■□□□ 1.36
TCF4-261ENST00000627784 ATG3Q9NT62 314 aa23.53■■□□□ 1.36
TCF4-261ENST00000627784 PXDNLA1KZ92 1463 aa23.51■■□□□ 1.35
TCF4-261ENST00000627784 PHKG2P15735 406 aa23.51■■□□□ 1.35
TCF4-261ENST00000627784 SLC4A9Q96Q91 983 aa23.51■■□□□ 1.35
TCF4-261ENST00000627784 A0A0G2JLW4 131 aa23.5■■□□□ 1.35
TCF4-261ENST00000627784 WASHC2AQ641Q2 1341 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms