RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 DPYDQ12882 1025 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 USP4Q13107 963 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 AGERQ15109 404 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 SPNS2Q8IVW8 549 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 FAM174AQ8TBP5 190 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 ADAM32Q8TC27 787 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 ZNF594Q96JF6 807 aaPredicted RBP4.38□□□□□ -1.71
SCN8A-210ENST00000627665 BCL2L13Q9BXK5 485 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 EGFL7Q9UHF1 273 aa4.38□□□□□ -1.71
SCN8A-210ENST00000627665 CDV3Q9UKY7 258 aaKnown RBP4.38□□□□□ -1.71
SCN8A-210ENST00000627665 TOP2AP11388 1531 aaKnown RBP4.37□□□□□ -1.71
SCN8A-210ENST00000627665 WDR97A6NE52 1622 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 MYCP01106 439 aaPredicted RBP4.37□□□□□ -1.71
SCN8A-210ENST00000627665 MMP16P51512 607 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 PSME1Q06323 249 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 NBPF20Q3BBV1 942 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 ADGRD1Q6QNK2 874 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 NYAP1Q6ZVC0 841 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 BPHLQ86WA6 291 aaPredicted RBP4.37□□□□□ -1.71
SCN8A-210ENST00000627665 PHTF2Q8N3S3 785 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 WNT2BQ93097 391 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 THAP11Q96EK4 314 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 PRDM2Q13029 1718 aa4.37□□□□□ -1.71
SCN8A-210ENST00000627665 ABL1P00519 1130 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 APLP1P51693 650 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 GTF2IP78347 998 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 FGD1P98174 961 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 OXLD1Q5BKU9 147 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 PHLDB3Q6NSJ2 640 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 GLYCTKQ8IVS8 523 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 ZSCAN29Q8IWY8 852 aaPredicted RBP4.36□□□□□ -1.71
SCN8A-210ENST00000627665 SIX5Q8N196 739 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 CCDC24Q8N4L8 307 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 SLC10A4Q96EP9 437 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 HINFPQ9BQA5 517 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.36□□□□□ -1.71
SCN8A-210ENST00000627665 CHIC2Q9UKJ5 165 aa4.36□□□□□ -1.71
SCN8A-210ENST00000627665 MAGEB6P1A0A0J9YX57 407 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 FAM205CA6NFA0 338 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 PTCD1O75127 700 aaKnown RBP4.35□□□□□ -1.71
SCN8A-210ENST00000627665 HMGB1P09429 215 aaKnown RBP4.35□□□□□ -1.71
SCN8A-210ENST00000627665 LSM11P83369 360 aaKnown RBP eCLIP4.35□□□□□ -1.71
SCN8A-210ENST00000627665 SF3B2Q13435 895 aaKnown RBP4.35□□□□□ -1.71
SCN8A-210ENST00000627665 CCDC102BQ68D86 513 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 POTEEQ6S8J3 1075 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 SEPT12Q8IYM1 358 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 UNC93B1Q9H1C4 597 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 USP35Q9P2H5 1018 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 CEP170Q5SW79 1584 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 DIP2BQ9P265 1576 aa4.35□□□□□ -1.71
SCN8A-210ENST00000627665 ADH1BP00325 375 aa4.34□□□□□ -1.71
SCN8A-210ENST00000627665 TRAF7Q6Q0C0 670 aa4.34□□□□□ -1.71
SCN8A-210ENST00000627665 TPCN2Q8NHX9 752 aa4.34□□□□□ -1.71
SCN8A-210ENST00000627665 MRRFQ96E11 262 aaKnown RBP4.34□□□□□ -1.71
SCN8A-210ENST00000627665 CARD14Q9BXL6 1004 aa4.34□□□□□ -1.71
SCN8A-210ENST00000627665 CXXC1Q9P0U4 656 aaPredicted RBP4.34□□□□□ -1.71
SCN8A-210ENST00000627665 MAPKBP1O60336 1514 aa4.34□□□□□ -1.71
SCN8A-210ENST00000627665 CCDC88BA6NC98 1476 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 FGD5Q6ZNL6 1462 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 ANKRD33BA6NCL7 494 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 M0R2N6 131 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 PRMT3O60678 531 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 ICMTO60725 284 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 MAPK1P28482 360 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 SERPINB4P48594 390 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 BCAMP50895 628 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 CLDN10P78369 228 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 FKBP4Q02790 459 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCN8A-210ENST00000627665 DNAJC14Q6Y2X3 702 aaPredicted RBP4.33□□□□□ -1.72
SCN8A-210ENST00000627665 SH3BP5LQ7L8J4 393 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 TAS1R3Q7RTX0 852 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 FAM160A2Q8N612 972 aaPredicted RBP4.33□□□□□ -1.72
SCN8A-210ENST00000627665 GIPC2Q8TF65 315 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 VTI1AQ96AJ9 217 aa4.33□□□□□ -1.72
SCN8A-210ENST00000627665 GRIN2AQ12879 1464 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 NUP160Q12769 1436 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 H3BRB1 525 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 BACH1O14867 736 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 HRO43593 1189 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 C21orf2O43822 256 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 ST18O60284 1047 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 GIGYF1O75420 1035 aaPredicted RBP4.32□□□□□ -1.72
SCN8A-210ENST00000627665 ZNF16P17020 682 aaPredicted RBP4.32□□□□□ -1.72
SCN8A-210ENST00000627665 COPS2P61201 443 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 COL19A1Q14993 1142 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 ANKRD13DQ6ZTN6 518 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 SLC6A16Q9GZN6 736 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 TUT1Q9H6E5 874 aaKnown RBP4.32□□□□□ -1.72
SCN8A-210ENST00000627665 DCTN4Q9UJW0 460 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 PCDHB11Q9Y5F2 797 aa4.32□□□□□ -1.72
SCN8A-210ENST00000627665 PRG4Q92954 1404 aaPredicted RBP4.31□□□□□ -1.72
SCN8A-210ENST00000627665 ZBTB7BO15156 539 aaPredicted RBP4.31□□□□□ -1.72
SCN8A-210ENST00000627665 ZBTB24O43167 697 aaPredicted RBP4.31□□□□□ -1.72
SCN8A-210ENST00000627665 ZPR1O75312 459 aa4.31□□□□□ -1.72
SCN8A-210ENST00000627665 FAM13AO94988 1023 aa4.31□□□□□ -1.72
SCN8A-210ENST00000627665 MARVELD3Q96A59 401 aa4.31□□□□□ -1.72
SCN8A-210ENST00000627665 COL26A1Q96A83 441 aa4.31□□□□□ -1.72
SCN8A-210ENST00000627665 PRIMPOLQ96LW4 560 aa4.31□□□□□ -1.72
SCN8A-210ENST00000627665 OCSTAMPQ9BR26 566 aa4.31□□□□□ -1.72
SCN8A-210ENST00000627665 UNCXA6NJT0 531 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms