RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 COL23A1Q86Y22 540 aaPredicted RBP12.52□□□□□ -0.41
TCF4-258ENST00000627320 UBR3Q6ZT12 1888 aa12.52□□□□□ -0.41
TCF4-258ENST00000627320 CCDC7Q96M83 1385 aa12.52□□□□□ -0.41
TCF4-258ENST00000627320 RAB3GAP2Q9H2M9 1393 aa12.52□□□□□ -0.41
TCF4-258ENST00000627320 AMIGO3Q86WK7 504 aa12.51□□□□□ -0.41
TCF4-258ENST00000627320 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
TCF4-258ENST00000627320 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
TCF4-258ENST00000627320 TFCP2L1Q9NZI6 479 aa12.51□□□□□ -0.41
TCF4-258ENST00000627320 DNAJC5GQ8N7S2 189 aa12.5□□□□□ -0.41
TCF4-258ENST00000627320 NLRP2Q9NX02 1062 aa12.5□□□□□ -0.41
TCF4-258ENST00000627320 TTC21BQ7Z4L5 1316 aa12.5□□□□□ -0.41
TCF4-258ENST00000627320 ITGB4P16144 1822 aa12.5□□□□□ -0.41
TCF4-258ENST00000627320 ERBB3P21860 1342 aa12.49□□□□□ -0.41
TCF4-258ENST00000627320 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
TCF4-258ENST00000627320 PCNTO95613 3336 aa12.49□□□□□ -0.41
TCF4-258ENST00000627320 CENPJQ9HC77 1338 aaPredicted RBP12.48□□□□□ -0.41
TCF4-258ENST00000627320 DDX54Q8TDD1 881 aaKnown RBP12.48□□□□□ -0.41
TCF4-258ENST00000627320 SLC16A10Q8TF71 515 aa12.48□□□□□ -0.41
TCF4-258ENST00000627320 SYTL4Q96C24 671 aaPredicted RBP12.48□□□□□ -0.41
TCF4-258ENST00000627320 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
TCF4-258ENST00000627320 GRIN3BO60391 1043 aa12.47□□□□□ -0.41
TCF4-258ENST00000627320 IL2RBP14784 551 aa12.47□□□□□ -0.41
TCF4-258ENST00000627320 C4BP0C0L5 1744 aa12.47□□□□□ -0.41
TCF4-258ENST00000627320 PKD1L3Q7Z443 1732 aa12.47□□□□□ -0.41
TCF4-258ENST00000627320 BRCA1P38398 1863 aaKnown RBP12.46□□□□□ -0.41
TCF4-258ENST00000627320 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
TCF4-258ENST00000627320 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.41
TCF4-258ENST00000627320 IGSF1Q8N6C5 1336 aa12.45□□□□□ -0.42
TCF4-258ENST00000627320 NME9Q86XW9 330 aa12.45□□□□□ -0.42
TCF4-258ENST00000627320 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
TCF4-258ENST00000627320 KIF13BQ9NQT8 1826 aa12.45□□□□□ -0.42
TCF4-258ENST00000627320 MEGF6O75095 1541 aa12.45□□□□□ -0.42
TCF4-258ENST00000627320 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
TCF4-258ENST00000627320 CCNL1Q9UK58 526 aaPredicted RBP12.44□□□□□ -0.42
TCF4-258ENST00000627320 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
TCF4-258ENST00000627320 SLC27A3Q5K4L6 730 aa12.43□□□□□ -0.42
TCF4-258ENST00000627320 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
TCF4-258ENST00000627320 MAP2P11137 1827 aaKnown RBP12.43□□□□□ -0.42
TCF4-258ENST00000627320 ANKRD36BQ8N2N9 1353 aa12.43□□□□□ -0.42
TCF4-258ENST00000627320 FBLN1P23142 703 aa12.42□□□□□ -0.42
TCF4-258ENST00000627320 KCNH5Q8NCM2 988 aa12.42□□□□□ -0.42
TCF4-258ENST00000627320 KTN1Q86UP2 1357 aaKnown RBP12.42□□□□□ -0.42
TCF4-258ENST00000627320 APLP1P51693 650 aa12.4□□□□□ -0.42
TCF4-258ENST00000627320 PHF14O94880 888 aa12.39□□□□□ -0.43
TCF4-258ENST00000627320 SBF1O95248 1867 aa12.39□□□□□ -0.43
TCF4-258ENST00000627320 TNS4Q8IZW8 715 aa12.38□□□□□ -0.43
TCF4-258ENST00000627320 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
TCF4-258ENST00000627320 ARFGEF1Q9Y6D6 1849 aa12.38□□□□□ -0.43
TCF4-258ENST00000627320 SBNO2Q9Y2G9 1366 aa12.38□□□□□ -0.43
TCF4-258ENST00000627320 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
TCF4-258ENST00000627320 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
TCF4-258ENST00000627320 CD2APQ9Y5K6 639 aa12.37□□□□□ -0.43
TCF4-258ENST00000627320 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
TCF4-258ENST00000627320 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
TCF4-258ENST00000627320 USP31Q70CQ4 1352 aa12.36□□□□□ -0.43
TCF4-258ENST00000627320 C4AP0C0L4 1744 aa12.35□□□□□ -0.43
TCF4-258ENST00000627320 PRELPP51888 382 aa12.35□□□□□ -0.43
TCF4-258ENST00000627320 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
TCF4-258ENST00000627320 TNRC6CQ9HCJ0 1690 aaKnown RBP12.35□□□□□ -0.43
TCF4-258ENST00000627320 EVC2Q86UK5 1308 aa12.35□□□□□ -0.43
TCF4-258ENST00000627320 USP47Q96K76 1375 aa12.34□□□□□ -0.43
TCF4-258ENST00000627320 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
TCF4-258ENST00000627320 TOMM70O94826 608 aa12.33□□□□□ -0.44
TCF4-258ENST00000627320 JMYQ8N9B5 988 aa12.33□□□□□ -0.44
TCF4-258ENST00000627320 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
TCF4-258ENST00000627320 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
TCF4-258ENST00000627320 BCS1LQ9Y276 419 aa12.31□□□□□ -0.44
TCF4-258ENST00000627320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.3□□□□□ -0.44
TCF4-258ENST00000627320 LINC00116Q8NCU8 138 aa12.3□□□□□ -0.44
TCF4-258ENST00000627320 ZCRB1Q8TBF4 217 aaKnown RBP12.3□□□□□ -0.44
TCF4-258ENST00000627320 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
TCF4-258ENST00000627320 COL5A3P25940 1745 aaPredicted RBP12.3□□□□□ -0.44
TCF4-258ENST00000627320 MAP3K19Q56UN5 1328 aa12.3□□□□□ -0.44
TCF4-258ENST00000627320 A0A1W2PP64 1363 aa12.3□□□□□ -0.44
TCF4-258ENST00000627320 MYH14Q7Z406 1995 aaKnown RBP12.29□□□□□ -0.44
TCF4-258ENST00000627320 HSPA1AP0DMV8 641 aaKnown RBP12.29□□□□□ -0.44
TCF4-258ENST00000627320 HSPA1BP0DMV9 641 aaKnown RBP12.29□□□□□ -0.44
TCF4-258ENST00000627320 MPRIPQ6WCQ1 1025 aa12.29□□□□□ -0.44
TCF4-258ENST00000627320 STAC3Q96MF2 364 aa12.29□□□□□ -0.44
TCF4-258ENST00000627320 SLC12A5Q9H2X9 1139 aa12.29□□□□□ -0.44
TCF4-258ENST00000627320 HOXC9P31274 260 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 NBPF6Q5VWK0 638 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 ARHGAP27Q6ZUM4 889 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 IP6K1Q92551 441 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 AK7Q96M32 723 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 NBPF4Q96M43 638 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 C10orf71Q711Q0 1435 aa12.28□□□□□ -0.44
TCF4-258ENST00000627320 TMC1Q8TDI8 760 aa12.27□□□□□ -0.45
TCF4-258ENST00000627320 KIF20BQ96Q89 1820 aa12.26□□□□□ -0.45
TCF4-258ENST00000627320 MMP10P09238 476 aa12.26□□□□□ -0.45
TCF4-258ENST00000627320 DPEP1P16444 411 aa12.26□□□□□ -0.45
TCF4-258ENST00000627320 ITPK1Q13572 414 aa12.26□□□□□ -0.45
TCF4-258ENST00000627320 C9orf131Q5VYM1 1079 aa12.26□□□□□ -0.45
TCF4-258ENST00000627320 RBM46Q8TBY0 533 aaKnown RBP12.26□□□□□ -0.45
TCF4-258ENST00000627320 RRAGCQ9HB90 399 aa12.26□□□□□ -0.45
TCF4-258ENST00000627320 EDC4Q6P2E9 1401 aaKnown RBP12.26□□□□□ -0.45
TCF4-258ENST00000627320 SLC34A2O95436 690 aa12.25□□□□□ -0.45
TCF4-258ENST00000627320 RRS1Q15050 365 aaKnown RBP12.25□□□□□ -0.45
TCF4-258ENST00000627320 CYP27B1O15528 508 aa12.24□□□□□ -0.45
TCF4-258ENST00000627320 AFDNP55196 1824 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms