RNA–Protein interactions for RNA: ENST00000627309.1

LINC00216-202, long intergenic non-protein coding RNA 216, humanhuman

Gene LINC00216, Length 1,115 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00216-202ENST00000627309 SOS2Q07890 1332 aaPredicted RBP10.03□□□□□ -0.8
LINC00216-202ENST00000627309 ZBBXA8MT70 800 aa10.02□□□□□ -0.81
LINC00216-202ENST00000627309 Q6ZVU0 165 aa10.02□□□□□ -0.81
LINC00216-202ENST00000627309 PALM3A6NDB9 673 aaPredicted RBP10.01□□□□□ -0.81
LINC00216-202ENST00000627309 FAM181BA6NEQ2 426 aa10.01□□□□□ -0.81
LINC00216-202ENST00000627309 ZNF592Q92610 1267 aa10.01□□□□□ -0.81
LINC00216-202ENST00000627309 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
LINC00216-202ENST00000627309 FBXO45P0C2W1 286 aa10□□□□□ -0.81
LINC00216-202ENST00000627309 INTS6LQ5JSJ4 861 aaKnown RBP10□□□□□ -0.81
LINC00216-202ENST00000627309 TRIM52Q96A61 297 aa10□□□□□ -0.81
LINC00216-202ENST00000627309 ERBB4Q15303 1308 aa10□□□□□ -0.81
LINC00216-202ENST00000627309 TTLL8A6PVC2 850 aa9.99□□□□□ -0.81
LINC00216-202ENST00000627309 VSIG8P0DPA2 414 aa9.99□□□□□ -0.81
LINC00216-202ENST00000627309 RFX1P22670 979 aa9.99□□□□□ -0.81
LINC00216-202ENST00000627309 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.99□□□□□ -0.81
LINC00216-202ENST00000627309 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
LINC00216-202ENST00000627309 UCN2Q96RP3 112 aa9.99□□□□□ -0.81
LINC00216-202ENST00000627309 DNMT3LQ9UJW3 386 aa9.99□□□□□ -0.81
LINC00216-202ENST00000627309 LMOD1P29536 600 aaPredicted RBP9.98□□□□□ -0.81
LINC00216-202ENST00000627309 SRPK2P78362 688 aaKnown RBP9.98□□□□□ -0.81
LINC00216-202ENST00000627309 CBLBQ13191 982 aa9.98□□□□□ -0.81
LINC00216-202ENST00000627309 TFIP11Q9UBB9 837 aaKnown RBP9.98□□□□□ -0.81
LINC00216-202ENST00000627309 USTQ9Y2C2 406 aa9.98□□□□□ -0.81
LINC00216-202ENST00000627309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.97□□□□□ -0.81
LINC00216-202ENST00000627309 SPINT1O43278 529 aa9.97□□□□□ -0.81
LINC00216-202ENST00000627309 CSB-PGBD3P0DP91 1061 aa9.97□□□□□ -0.81
LINC00216-202ENST00000627309 ZSCAN1Q8NBB4 408 aa9.97□□□□□ -0.81
LINC00216-202ENST00000627309 PPFIA3O75145 1194 aa9.96□□□□□ -0.82
LINC00216-202ENST00000627309 MCCD1P59942 119 aaPredicted RBP9.96□□□□□ -0.82
LINC00216-202ENST00000627309 NFATC2IPQ8NCF5 419 aa9.96□□□□□ -0.82
LINC00216-202ENST00000627309 MAFBQ9Y5Q3 323 aaPredicted RBP9.96□□□□□ -0.82
LINC00216-202ENST00000627309 ATP9BO43861 1147 aa9.95□□□□□ -0.82
LINC00216-202ENST00000627309 PATL2C9JE40 543 aaKnown RBP9.94□□□□□ -0.82
LINC00216-202ENST00000627309 TBC1D9Q6ZT07 1266 aa9.93□□□□□ -0.82
LINC00216-202ENST00000627309 SEPT12Q8IYM1 358 aa9.93□□□□□ -0.82
LINC00216-202ENST00000627309 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
LINC00216-202ENST00000627309 ESPNB1AK53 854 aa9.92□□□□□ -0.82
LINC00216-202ENST00000627309 ATG7O95352 703 aa9.92□□□□□ -0.82
LINC00216-202ENST00000627309 AEBP1Q8IUX7 1158 aa9.92□□□□□ -0.82
LINC00216-202ENST00000627309 RAB15P59190 212 aa9.91□□□□□ -0.82
LINC00216-202ENST00000627309 RELBQ01201 579 aa9.91□□□□□ -0.82
LINC00216-202ENST00000627309 PTSQ03393 145 aa9.91□□□□□ -0.82
LINC00216-202ENST00000627309 CCDC125Q86Z20 511 aa9.91□□□□□ -0.82
LINC00216-202ENST00000627309 AGBL1Q96MI9 1066 aa9.91□□□□□ -0.82
LINC00216-202ENST00000627309 TMPRSS4Q9NRS4 437 aa9.91□□□□□ -0.82
LINC00216-202ENST00000627309 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
LINC00216-202ENST00000627309 ERVH48-1M5A8F1 160 aa9.9□□□□□ -0.82
LINC00216-202ENST00000627309 ZNF784Q8NCA9 323 aaPredicted RBP9.9□□□□□ -0.82
LINC00216-202ENST00000627309 ADH1AP07327 375 aa9.89□□□□□ -0.83
LINC00216-202ENST00000627309 LORP23490 312 aaPredicted RBP9.89□□□□□ -0.83
LINC00216-202ENST00000627309 VRTNQ9H8Y1 702 aa9.89□□□□□ -0.83
LINC00216-202ENST00000627309 BRD1O95696 1058 aa9.88□□□□□ -0.83
LINC00216-202ENST00000627309 PLEKHM2Q8IWE5 1019 aa9.88□□□□□ -0.83
LINC00216-202ENST00000627309 INSM2Q96T92 566 aaPredicted RBP9.88□□□□□ -0.83
LINC00216-202ENST00000627309 POLMQ9NP87 494 aaPredicted RBP9.88□□□□□ -0.83
LINC00216-202ENST00000627309 LILRA1O75019 489 aa9.87□□□□□ -0.83
LINC00216-202ENST00000627309 CTSOP43234 321 aaPredicted RBP9.87□□□□□ -0.83
LINC00216-202ENST00000627309 SLFNL1Q499Z3 407 aa9.87□□□□□ -0.83
LINC00216-202ENST00000627309 CCDC155Q8N6L0 562 aa9.87□□□□□ -0.83
LINC00216-202ENST00000627309 ZNF395Q9H8N7 513 aaPredicted RBP9.87□□□□□ -0.83
LINC00216-202ENST00000627309 PCDHB9Q9Y5E1 797 aa9.87□□□□□ -0.83
LINC00216-202ENST00000627309 USP17L3A6NCW0 530 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 USP17L4A6NCW7 530 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 LZTS3O60299 673 aaPredicted RBP9.86□□□□□ -0.83
LINC00216-202ENST00000627309 SKIP12755 728 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 PTGIRP43119 386 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 ELOAQ14241 798 aaKnown RBP9.86□□□□□ -0.83
LINC00216-202ENST00000627309 RNF20Q5VTR2 975 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 USP17L2Q6R6M4 530 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 USP17L1Q7RTZ2 530 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 CEP126Q9P2H0 1117 aa9.86□□□□□ -0.83
LINC00216-202ENST00000627309 SLC35F4A4IF30 521 aa9.85□□□□□ -0.83
LINC00216-202ENST00000627309 USP17L5A8MUK1 530 aa9.85□□□□□ -0.83
LINC00216-202ENST00000627309 PIK3CDO00329 1044 aa9.85□□□□□ -0.83
LINC00216-202ENST00000627309 ADD1P35611 737 aaKnown RBP9.85□□□□□ -0.83
LINC00216-202ENST00000627309 KCNA1Q09470 495 aa9.85□□□□□ -0.83
LINC00216-202ENST00000627309 NANOS1Q8WY41 292 aaKnown RBP9.85□□□□□ -0.83
LINC00216-202ENST00000627309 CDCA8Q53HL2 280 aa9.84□□□□□ -0.83
LINC00216-202ENST00000627309 KANK4Q5T7N3 995 aaPredicted RBP9.84□□□□□ -0.83
LINC00216-202ENST00000627309 RNF217Q8TC41 542 aa9.84□□□□□ -0.83
LINC00216-202ENST00000627309 GIGYF1O75420 1035 aaPredicted RBP9.83□□□□□ -0.84
LINC00216-202ENST00000627309 RNF135Q8IUD6 432 aa9.83□□□□□ -0.84
LINC00216-202ENST00000627309 CYLDQ9NQC7 956 aa9.83□□□□□ -0.84
LINC00216-202ENST00000627309 MAP7D1Q3KQU3 841 aa9.82□□□□□ -0.84
LINC00216-202ENST00000627309 TMEM88BA6NKF7 163 aa9.81□□□□□ -0.84
LINC00216-202ENST00000627309 ITGA6P23229 1130 aa9.81□□□□□ -0.84
LINC00216-202ENST00000627309 B4GALNT3Q6L9W6 998 aa9.81□□□□□ -0.84
LINC00216-202ENST00000627309 PHTF2Q8N3S3 785 aa9.81□□□□□ -0.84
LINC00216-202ENST00000627309 KDF1Q8NAX2 398 aaPredicted RBP9.81□□□□□ -0.84
LINC00216-202ENST00000627309 CHIC2Q9UKJ5 165 aa9.81□□□□□ -0.84
LINC00216-202ENST00000627309 FAM196BA6NMK8 535 aa9.8□□□□□ -0.84
LINC00216-202ENST00000627309 ATP5J2-PTCD1G3V325 749 aa9.8□□□□□ -0.84
LINC00216-202ENST00000627309 LYSMD3Q7Z3D4 306 aa9.8□□□□□ -0.84
LINC00216-202ENST00000627309 PLPP7Q8NBV4 271 aa9.8□□□□□ -0.84
LINC00216-202ENST00000627309 FOXD4L5Q5VV16 416 aaPredicted RBP9.79□□□□□ -0.84
LINC00216-202ENST00000627309 SV2AQ7L0J3 742 aa9.79□□□□□ -0.84
LINC00216-202ENST00000627309 GPR161Q8N6U8 529 aaKnown RBP9.79□□□□□ -0.84
LINC00216-202ENST00000627309 MKRN1Q9UHC7 482 aaKnown RBP9.79□□□□□ -0.84
LINC00216-202ENST00000627309 RNF144AP50876 292 aaPredicted RBP9.78□□□□□ -0.84
LINC00216-202ENST00000627309 NCOA4Q13772 614 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms