RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 ARXQ96QS3 562 aa23.17■■□□□ 1.3
TRIM29-221ENST00000627238 CGNL1Q0VF96 1302 aa23.16■■□□□ 1.3
TRIM29-221ENST00000627238 TUBGCP6Q96RT7 1819 aa23.16■■□□□ 1.3
TRIM29-221ENST00000627238 FYB1O15117 783 aa23.15■■□□□ 1.3
TRIM29-221ENST00000627238 ZCRB1Q8TBF4 217 aaKnown RBP23.15■■□□□ 1.3
TRIM29-221ENST00000627238 KIF24Q5T7B8 1368 aa23.14■■□□□ 1.3
TRIM29-221ENST00000627238 CHD4Q14839 1912 aa23.14■■□□□ 1.3
TRIM29-221ENST00000627238 TMF1P82094 1093 aa23.14■■□□□ 1.29
TRIM29-221ENST00000627238 USP47Q96K76 1375 aa23.14■■□□□ 1.29
TRIM29-221ENST00000627238 FBLN1P23142 703 aa23.13■■□□□ 1.29
TRIM29-221ENST00000627238 PRIM1P49642 420 aaKnown RBP23.13■■□□□ 1.29
TRIM29-221ENST00000627238 KIF20BQ96Q89 1820 aa23.12■■□□□ 1.29
TRIM29-221ENST00000627238 PNPLA7Q6ZV29 1317 aa23.12■■□□□ 1.29
TRIM29-221ENST00000627238 GOLGB1Q14789 3259 aaKnown RBP23.12■■□□□ 1.29
TRIM29-221ENST00000627238 SMG6Q86US8 1419 aaKnown RBP23.11■■□□□ 1.29
TRIM29-221ENST00000627238 NBPF6Q5VWK0 638 aa23.11■■□□□ 1.29
TRIM29-221ENST00000627238 NBPF4Q96M43 638 aa23.11■■□□□ 1.29
TRIM29-221ENST00000627238 INSRP06213 1382 aa23.11■■□□□ 1.29
TRIM29-221ENST00000627238 RRS1Q15050 365 aaKnown RBP23.09■■□□□ 1.29
TRIM29-221ENST00000627238 CDCA8Q53HL2 280 aa23.09■■□□□ 1.29
TRIM29-221ENST00000627238 GGNBP2Q9H3C7 697 aa23.09■■□□□ 1.29
TRIM29-221ENST00000627238 FLT4P35916 1363 aa23.08■■□□□ 1.29
TRIM29-221ENST00000627238 ZNF784Q8NCA9 323 aaPredicted RBP23.07■■□□□ 1.28
TRIM29-221ENST00000627238 SYTL4Q96C24 671 aaPredicted RBP23.07■■□□□ 1.28
TRIM29-221ENST00000627238 TFCP2L1Q9NZI6 479 aa23.06■■□□□ 1.28
TRIM29-221ENST00000627238 NCAPD2Q15021 1401 aa23.06■■□□□ 1.28
TRIM29-221ENST00000627238 POLD1P28340 1107 aa23.05■■□□□ 1.28
TRIM29-221ENST00000627238 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
TRIM29-221ENST00000627238 ANKRD26Q9UPS8 1709 aa23.05■■□□□ 1.28
TRIM29-221ENST00000627238 CCNL1Q9UK58 526 aaPredicted RBP23.04■■□□□ 1.28
TRIM29-221ENST00000627238 PKD1L3Q7Z443 1732 aa23.03■■□□□ 1.28
TRIM29-221ENST00000627238 TATP17735 454 aaPredicted RBP23.03■■□□□ 1.28
TRIM29-221ENST00000627238 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
TRIM29-221ENST00000627238 PCDH11XQ9BZA7 1347 aa23.03■■□□□ 1.28
TRIM29-221ENST00000627238 PCDH11YQ9BZA8 1340 aa23.03■■□□□ 1.28
TRIM29-221ENST00000627238 C5P01031 1676 aa23.03■■□□□ 1.28
TRIM29-221ENST00000627238 KCNQ4P56696 695 aa23.02■■□□□ 1.28
TRIM29-221ENST00000627238 HSP90AB2PQ58FF8 381 aa23.02■■□□□ 1.28
TRIM29-221ENST00000627238 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
TRIM29-221ENST00000627238 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
TRIM29-221ENST00000627238 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
TRIM29-221ENST00000627238 CARD14Q9BXL6 1004 aa23■■□□□ 1.27
TRIM29-221ENST00000627238 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
TRIM29-221ENST00000627238 TOGARAM1Q9Y4F4 1720 aa22.99■■□□□ 1.27
TRIM29-221ENST00000627238 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
TRIM29-221ENST00000627238 ITGB4P16144 1822 aa22.97■■□□□ 1.27
TRIM29-221ENST00000627238 CYP27B1O15528 508 aa22.97■■□□□ 1.27
TRIM29-221ENST00000627238 COL23A1Q86Y22 540 aaPredicted RBP22.96■■□□□ 1.27
TRIM29-221ENST00000627238 GPR162Q16538 588 aa22.95■■□□□ 1.26
TRIM29-221ENST00000627238 PALLDQ8WX93 1383 aa22.95■■□□□ 1.26
TRIM29-221ENST00000627238 NKX1-1Q15270 411 aaPredicted RBP22.94■■□□□ 1.26
TRIM29-221ENST00000627238 FLAD1Q8NFF5 587 aa22.94■■□□□ 1.26
TRIM29-221ENST00000627238 WASHC2AQ641Q2 1341 aa22.93■■□□□ 1.26
TRIM29-221ENST00000627238 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
TRIM29-221ENST00000627238 PLEKHG2Q9H7P9 1386 aa22.92■■□□□ 1.26
TRIM29-221ENST00000627238 C4BP0C0L5 1744 aa22.92■■□□□ 1.26
TRIM29-221ENST00000627238 NLGN2Q8NFZ4 835 aa22.92■■□□□ 1.26
TRIM29-221ENST00000627238 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
TRIM29-221ENST00000627238 MAP2P11137 1827 aaKnown RBP22.92■■□□□ 1.26
TRIM29-221ENST00000627238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.91■■□□□ 1.26
TRIM29-221ENST00000627238 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
TRIM29-221ENST00000627238 UBR3Q6ZT12 1888 aa22.9■■□□□ 1.26
TRIM29-221ENST00000627238 MPRIPQ6WCQ1 1025 aa22.89■■□□□ 1.25
TRIM29-221ENST00000627238 KLHL34Q8N239 644 aa22.89■■□□□ 1.25
TRIM29-221ENST00000627238 GRIN3BO60391 1043 aa22.87■■□□□ 1.25
TRIM29-221ENST00000627238 PIGBQ92521 554 aa22.87■■□□□ 1.25
TRIM29-221ENST00000627238 SPG7Q9UQ90 795 aa22.87■■□□□ 1.25
TRIM29-221ENST00000627238 MSH5O43196 834 aa22.86■■□□□ 1.25
TRIM29-221ENST00000627238 C1QTNF8P60827 252 aa22.86■■□□□ 1.25
TRIM29-221ENST00000627238 CD2APQ9Y5K6 639 aa22.86■■□□□ 1.25
TRIM29-221ENST00000627238 EYA1Q99502 592 aa22.85■■□□□ 1.25
TRIM29-221ENST00000627238 POLKQ9UBT6 870 aa22.85■■□□□ 1.25
TRIM29-221ENST00000627238 YBX3P16989 372 aaKnown RBP eCLIP22.84■■□□□ 1.25
TRIM29-221ENST00000627238 MSL1Q68DK7 614 aa22.82■■□□□ 1.24
TRIM29-221ENST00000627238 AK7Q96M32 723 aa22.82■■□□□ 1.24
TRIM29-221ENST00000627238 ZNF831Q5JPB2 1677 aa22.81■■□□□ 1.24
TRIM29-221ENST00000627238 SSFA2P28290 1259 aa22.81■■□□□ 1.24
TRIM29-221ENST00000627238 PELP1Q8IZL8 1130 aaKnown RBP22.81■■□□□ 1.24
TRIM29-221ENST00000627238 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
TRIM29-221ENST00000627238 PPM1GO15355 546 aaPredicted RBP22.8■■□□□ 1.24
TRIM29-221ENST00000627238 PHKG2P15735 406 aa22.8■■□□□ 1.24
TRIM29-221ENST00000627238 SIK1P57059 783 aa22.8■■□□□ 1.24
TRIM29-221ENST00000627238 AMIGO3Q86WK7 504 aa22.8■■□□□ 1.24
TRIM29-221ENST00000627238 IFNL2Q8IZJ0 200 aa22.8■■□□□ 1.24
TRIM29-221ENST00000627238 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
TRIM29-221ENST00000627238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.77■■□□□ 1.24
TRIM29-221ENST00000627238 GIGYF1O75420 1035 aaPredicted RBP22.77■■□□□ 1.24
TRIM29-221ENST00000627238 EIF4A2Q14240 407 aaKnown RBP22.77■■□□□ 1.24
TRIM29-221ENST00000627238 IGSF1Q8N6C5 1336 aa22.77■■□□□ 1.24
TRIM29-221ENST00000627238 LINC00116Q8NCU8 138 aa22.76■■□□□ 1.23
TRIM29-221ENST00000627238 ASAP1Q9ULH1 1129 aa22.75■■□□□ 1.23
TRIM29-221ENST00000627238 KDRP35968 1356 aa22.75■■□□□ 1.23
TRIM29-221ENST00000627238 SENP3-EIF4A1A0A087X0R7 540 aa22.74■■□□□ 1.23
TRIM29-221ENST00000627238 ADCY9O60503 1353 aa22.74■■□□□ 1.23
TRIM29-221ENST00000627238 CEP350Q5VT06 3117 aa22.73■■□□□ 1.23
TRIM29-221ENST00000627238 ITPK1Q13572 414 aa22.73■■□□□ 1.23
TRIM29-221ENST00000627238 ATG3Q9NT62 314 aa22.73■■□□□ 1.23
TRIM29-221ENST00000627238 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
TRIM29-221ENST00000627238 ERVV-2B6SEH9 535 aa22.71■■□□□ 1.23
TRIM29-221ENST00000627238 PHF14O94880 888 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms