RNA–Protein interactions for RNA: ENST00000626926.1

CPSF7-226, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5 BASIC

Gene CPSF7, Length 306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-226ENST00000626926 SLC15A2Q16348 729 aa12.27□□□□□ -0.45
CPSF7-226ENST00000626926 TOGARAM1Q9Y4F4 1720 aa12.26□□□□□ -0.45
CPSF7-226ENST00000626926 PLEKHG2Q9H7P9 1386 aa12.26□□□□□ -0.45
CPSF7-226ENST00000626926 PTGER2P43116 358 aa12.25□□□□□ -0.45
CPSF7-226ENST00000626926 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
CPSF7-226ENST00000626926 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-226ENST00000626926 ACSBG1Q96GR2 724 aa12.25□□□□□ -0.45
CPSF7-226ENST00000626926 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
CPSF7-226ENST00000626926 PDGFDQ9GZP0 370 aaPredicted RBP12.25□□□□□ -0.45
CPSF7-226ENST00000626926 STK32BQ9NY57 414 aa12.25□□□□□ -0.45
CPSF7-226ENST00000626926 ITGB4P16144 1822 aa12.24□□□□□ -0.45
CPSF7-226ENST00000626926 SLC27A3Q5K4L6 730 aa12.24□□□□□ -0.45
CPSF7-226ENST00000626926 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
CPSF7-226ENST00000626926 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
CPSF7-226ENST00000626926 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
CPSF7-226ENST00000626926 C5P01031 1676 aa12.23□□□□□ -0.45
CPSF7-226ENST00000626926 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
CPSF7-226ENST00000626926 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
CPSF7-226ENST00000626926 LRRC4BQ9NT99 713 aa12.23□□□□□ -0.45
CPSF7-226ENST00000626926 DDX54Q8TDD1 881 aaKnown RBP12.22□□□□□ -0.45
CPSF7-226ENST00000626926 MTFR1LQ9H019 292 aa12.22□□□□□ -0.45
CPSF7-226ENST00000626926 WASHC2AQ641Q2 1341 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 PCDH11XQ9BZA7 1347 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 PCDH11YQ9BZA8 1340 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 ZNF827Q17R98 1081 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 PCGF6Q9BYE7 350 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
CPSF7-226ENST00000626926 ZBTB7AO95365 584 aa12.2□□□□□ -0.46
CPSF7-226ENST00000626926 PRIM1P49642 420 aaKnown RBP12.2□□□□□ -0.46
CPSF7-226ENST00000626926 EIF4G2P78344 907 aaKnown RBP eCLIP12.2□□□□□ -0.46
CPSF7-226ENST00000626926 RAPGEF4Q8WZA2 1011 aa12.2□□□□□ -0.46
CPSF7-226ENST00000626926 PPP1R1BQ9UD71 204 aaPredicted RBP12.2□□□□□ -0.46
CPSF7-226ENST00000626926 USHBP1Q8N6Y0 703 aa12.19□□□□□ -0.46
CPSF7-226ENST00000626926 UTRNP46939 3433 aa12.18□□□□□ -0.46
CPSF7-226ENST00000626926 TATP17735 454 aaPredicted RBP12.18□□□□□ -0.46
CPSF7-226ENST00000626926 SLC16A10Q8TF71 515 aa12.18□□□□□ -0.46
CPSF7-226ENST00000626926 POLKQ9UBT6 870 aa12.18□□□□□ -0.46
CPSF7-226ENST00000626926 PNPLA7Q6ZV29 1317 aa12.17□□□□□ -0.46
CPSF7-226ENST00000626926 ZNF831Q5JPB2 1677 aa12.17□□□□□ -0.46
CPSF7-226ENST00000626926 CYP27B1O15528 508 aa12.17□□□□□ -0.46
CPSF7-226ENST00000626926 HSPA5P11021 654 aaKnown RBP12.17□□□□□ -0.46
CPSF7-226ENST00000626926 NKX1-1Q15270 411 aaPredicted RBP12.17□□□□□ -0.46
CPSF7-226ENST00000626926 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
CPSF7-226ENST00000626926 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
CPSF7-226ENST00000626926 CHD4Q14839 1912 aa12.16□□□□□ -0.46
CPSF7-226ENST00000626926 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
CPSF7-226ENST00000626926 SYTL4Q96C24 671 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-226ENST00000626926 SYT17Q9BSW7 474 aa12.15□□□□□ -0.46
CPSF7-226ENST00000626926 ATF5Q9Y2D1 282 aaPredicted RBP12.15□□□□□ -0.46
CPSF7-226ENST00000626926 PALLDQ8WX93 1383 aa12.15□□□□□ -0.46
CPSF7-226ENST00000626926 HMGB2P26583 209 aaKnown RBP12.14□□□□□ -0.47
CPSF7-226ENST00000626926 EYA1Q99502 592 aa12.14□□□□□ -0.47
CPSF7-226ENST00000626926 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-226ENST00000626926 CCNL1Q9UK58 526 aaPredicted RBP12.14□□□□□ -0.47
CPSF7-226ENST00000626926 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
CPSF7-226ENST00000626926 CICQ96RK0 1608 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-226ENST00000626926 CCER1Q8TC90 406 aaPredicted RBP12.13□□□□□ -0.47
CPSF7-226ENST00000626926 EIF4A2Q14240 407 aaKnown RBP12.12□□□□□ -0.47
CPSF7-226ENST00000626926 ARXQ96QS3 562 aa12.12□□□□□ -0.47
CPSF7-226ENST00000626926 PANK3Q9H999 370 aa12.12□□□□□ -0.47
CPSF7-226ENST00000626926 SPG7Q9UQ90 795 aa12.12□□□□□ -0.47
CPSF7-226ENST00000626926 COL5A3P25940 1745 aaPredicted RBP12.11□□□□□ -0.47
CPSF7-226ENST00000626926 KDRP35968 1356 aa12.11□□□□□ -0.47
CPSF7-226ENST00000626926 KCNQ4P56696 695 aa12.11□□□□□ -0.47
CPSF7-226ENST00000626926 TFCP2L1Q9NZI6 479 aa12.11□□□□□ -0.47
CPSF7-226ENST00000626926 GOLGB1Q14789 3259 aaKnown RBP12.11□□□□□ -0.47
CPSF7-226ENST00000626926 DCAF8L1A6NGE4 600 aa12.1□□□□□ -0.47
CPSF7-226ENST00000626926 PPM1GO15355 546 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-226ENST00000626926 PHKG2P15735 406 aa12.1□□□□□ -0.47
CPSF7-226ENST00000626926 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-226ENST00000626926 YY1P25490 414 aa12.09□□□□□ -0.47
CPSF7-226ENST00000626926 PIGBQ92521 554 aa12.09□□□□□ -0.47
CPSF7-226ENST00000626926 SCN11AQ9UI33 1791 aa12.08□□□□□ -0.48
CPSF7-226ENST00000626926 POLD1P28340 1107 aa12.08□□□□□ -0.48
CPSF7-226ENST00000626926 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-226ENST00000626926 MPRIPQ6WCQ1 1025 aa12.08□□□□□ -0.48
CPSF7-226ENST00000626926 COL23A1Q86Y22 540 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-226ENST00000626926 IFNL2Q8IZJ0 200 aa12.08□□□□□ -0.48
CPSF7-226ENST00000626926 FLAD1Q8NFF5 587 aa12.08□□□□□ -0.48
CPSF7-226ENST00000626926 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
CPSF7-226ENST00000626926 ADAMTS7Q9UKP4 1686 aa12.07□□□□□ -0.48
CPSF7-226ENST00000626926 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
CPSF7-226ENST00000626926 KDM6AO15550 1401 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-226ENST00000626926 POLR3GLQ9BT43 218 aa12.07□□□□□ -0.48
CPSF7-226ENST00000626926 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-226ENST00000626926 NPC1L1Q9UHC9 1359 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 KIF13BQ9NQT8 1826 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 ERVV-2B6SEH9 535 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 SIK1P57059 783 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 TMOD3Q9NYL9 352 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 KNSTRNQ9Y448 316 aa12.05□□□□□ -0.48
CPSF7-226ENST00000626926 MRC1P22897 1456 aa12.04□□□□□ -0.48
CPSF7-226ENST00000626926 C4AP0C0L4 1744 aa12.04□□□□□ -0.48
CPSF7-226ENST00000626926 TJP1Q07157 1748 aa12.04□□□□□ -0.48
CPSF7-226ENST00000626926 PER1O15534 1290 aaPredicted RBP12.04□□□□□ -0.48
CPSF7-226ENST00000626926 HSP90AB1P08238 724 aaKnown RBP12.04□□□□□ -0.48
CPSF7-226ENST00000626926 SSFA2P28290 1259 aa12.04□□□□□ -0.48
CPSF7-226ENST00000626926 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms