RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 CLK2P49760 499 aaKnown RBP8.34□□□□□ -1.07
VBP1-204ENST00000625964 RNF144AP50876 292 aaPredicted RBP8.34□□□□□ -1.07
VBP1-204ENST00000625964 ZNF837Q96EG3 531 aaPredicted RBP8.34□□□□□ -1.07
VBP1-204ENST00000625964 RSPH6AQ9H0K4 717 aa8.34□□□□□ -1.07
VBP1-204ENST00000625964 BTBD11A6QL63 1104 aa8.34□□□□□ -1.08
VBP1-204ENST00000625964 CTDSPL2Q05D32 466 aa8.34□□□□□ -1.08
VBP1-204ENST00000625964 ZNF784Q8NCA9 323 aaPredicted RBP8.34□□□□□ -1.08
VBP1-204ENST00000625964 H7C1W4 665 aa8.33□□□□□ -1.08
VBP1-204ENST00000625964 LILRA1O75019 489 aa8.33□□□□□ -1.08
VBP1-204ENST00000625964 ALYREFQ86V81 257 aaKnown RBP8.33□□□□□ -1.08
VBP1-204ENST00000625964 TMPRSS4Q9NRS4 437 aa8.33□□□□□ -1.08
VBP1-204ENST00000625964 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
VBP1-204ENST00000625964 ADD1P35611 737 aaKnown RBP8.31□□□□□ -1.08
VBP1-204ENST00000625964 KDF1Q8NAX2 398 aaPredicted RBP8.31□□□□□ -1.08
VBP1-204ENST00000625964 ADAM32Q8TC27 787 aa8.31□□□□□ -1.08
VBP1-204ENST00000625964 ACDQ96AP0 544 aa8.31□□□□□ -1.08
VBP1-204ENST00000625964 TRERF1Q96PN7 1200 aa8.31□□□□□ -1.08
VBP1-204ENST00000625964 GPC1P35052 558 aa8.3□□□□□ -1.08
VBP1-204ENST00000625964 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
VBP1-204ENST00000625964 PRICKLE2Q7Z3G6 844 aa8.3□□□□□ -1.08
VBP1-204ENST00000625964 PNMA1Q8ND90 353 aa8.3□□□□□ -1.08
VBP1-204ENST00000625964 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
VBP1-204ENST00000625964 DBN1Q16643 649 aa8.29□□□□□ -1.08
VBP1-204ENST00000625964 OCSTAMPQ9BR26 566 aa8.29□□□□□ -1.08
VBP1-204ENST00000625964 DYRK1BQ9Y463 629 aa8.29□□□□□ -1.08
VBP1-204ENST00000625964 SEPT12Q8IYM1 358 aa8.29□□□□□ -1.08
VBP1-204ENST00000625964 GPR25O00155 361 aa8.28□□□□□ -1.08
VBP1-204ENST00000625964 OIP5O43482 229 aa8.28□□□□□ -1.08
VBP1-204ENST00000625964 BAG6P46379 1132 aa8.28□□□□□ -1.08
VBP1-204ENST00000625964 PDE4DQ08499 809 aa8.28□□□□□ -1.08
VBP1-204ENST00000625964 NR6A1Q15406 480 aa8.28□□□□□ -1.08
VBP1-204ENST00000625964 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
VBP1-204ENST00000625964 ESPNB1AK53 854 aa8.27□□□□□ -1.09
VBP1-204ENST00000625964 RHOQP17081 205 aa8.27□□□□□ -1.09
VBP1-204ENST00000625964 RIPOR1Q6ZS17 1223 aa8.27□□□□□ -1.09
VBP1-204ENST00000625964 DZIP3Q86Y13 1208 aaKnown RBP8.27□□□□□ -1.09
VBP1-204ENST00000625964 Q8N3U1 123 aa8.27□□□□□ -1.09
VBP1-204ENST00000625964 MX2P20592 715 aa8.26□□□□□ -1.09
VBP1-204ENST00000625964 MAP2K3P46734 347 aa8.25□□□□□ -1.09
VBP1-204ENST00000625964 RAB15P59190 212 aa8.25□□□□□ -1.09
VBP1-204ENST00000625964 CCDC125Q86Z20 511 aa8.25□□□□□ -1.09
VBP1-204ENST00000625964 GTPBP3Q969Y2 492 aaKnown RBP8.25□□□□□ -1.09
VBP1-204ENST00000625964 MKL2Q9ULH7 1088 aa8.25□□□□□ -1.09
VBP1-204ENST00000625964 POLR3EQ9NVU0 708 aa8.24□□□□□ -1.09
VBP1-204ENST00000625964 ATP5J2-PTCD1G3V325 749 aa8.24□□□□□ -1.09
VBP1-204ENST00000625964 WDR44Q5JSH3 913 aa8.24□□□□□ -1.09
VBP1-204ENST00000625964 KRBA1A5PL33 1030 aa8.23□□□□□ -1.09
VBP1-204ENST00000625964 OXCT2Q9BYC2 517 aaPredicted RBP8.23□□□□□ -1.09
VBP1-204ENST00000625964 GAS2L1Q99501 681 aaPredicted RBP8.22□□□□□ -1.09
VBP1-204ENST00000625964 CFHR5Q9BXR6 569 aa8.22□□□□□ -1.09
VBP1-204ENST00000625964 CYLDQ9NQC7 956 aa8.21□□□□□ -1.1
VBP1-204ENST00000625964 MEN1O00255 615 aa8.2□□□□□ -1.1
VBP1-204ENST00000625964 PIK3R2O00459 728 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 SNRPNP63162 240 aaKnown RBP8.19□□□□□ -1.1
VBP1-204ENST00000625964 SLC27A3Q5K4L6 730 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 NUCKS1Q9H1E3 243 aaKnown RBP8.19□□□□□ -1.1
VBP1-204ENST00000625964 GDF2Q9UK05 429 aaPredicted RBP8.19□□□□□ -1.1
VBP1-204ENST00000625964 A0A1W2PRU2 124 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 SPATA31C2B4DYI2 1134 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 FURINP09958 794 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 POU4F2Q12837 409 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 SKIV2LQ15477 1246 aaKnown RBP8.19□□□□□ -1.1
VBP1-204ENST00000625964 NLRP3Q96P20 1036 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 GRIP2Q9C0E4 1043 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 PHF24Q9UPV7 400 aa8.19□□□□□ -1.1
VBP1-204ENST00000625964 F11P03951 625 aa8.18□□□□□ -1.1
VBP1-204ENST00000625964 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
VBP1-204ENST00000625964 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
VBP1-204ENST00000625964 KRTAP4-8A0A0G2JLE6 195 aa8.17□□□□□ -1.1
VBP1-204ENST00000625964 TIMMDC1Q9NPL8 285 aa8.16□□□□□ -1.1
VBP1-204ENST00000625964 SHISA8B8ZZ34 492 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 COL8A1P27658 744 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 CLN3Q13286 438 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 CC2D2BQ6DHV5 1058 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 GOLGA6L1Q8N7Z2 621 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 EDARADDQ8WWZ3 215 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 KLRG1Q96E93 195 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 BCANQ96GW7 911 aa8.15□□□□□ -1.1
VBP1-204ENST00000625964 AP1G2O75843 785 aa8.14□□□□□ -1.11
VBP1-204ENST00000625964 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
VBP1-204ENST00000625964 TAS1R3Q7RTX0 852 aa8.14□□□□□ -1.11
VBP1-204ENST00000625964 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.14□□□□□ -1.11
VBP1-204ENST00000625964 KRTAP9-9Q9BYP9 154 aa8.14□□□□□ -1.11
VBP1-204ENST00000625964 KRTAP9-4Q9BYQ2 154 aa8.14□□□□□ -1.11
VBP1-204ENST00000625964 RRAGCQ9HB90 399 aa8.14□□□□□ -1.11
VBP1-204ENST00000625964 LBRQ14739 615 aaKnown RBP8.13□□□□□ -1.11
VBP1-204ENST00000625964 RNF20Q5VTR2 975 aa8.13□□□□□ -1.11
VBP1-204ENST00000625964 CYP2U1Q7Z449 544 aa8.13□□□□□ -1.11
VBP1-204ENST00000625964 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
VBP1-204ENST00000625964 EPS8L1Q8TE68 723 aa8.13□□□□□ -1.11
VBP1-204ENST00000625964 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
VBP1-204ENST00000625964 GIGYF1O75420 1035 aaPredicted RBP8.12□□□□□ -1.11
VBP1-204ENST00000625964 GRIN2CQ14957 1233 aa8.12□□□□□ -1.11
VBP1-204ENST00000625964 LINC00114Q6XXX2 140 aa8.12□□□□□ -1.11
VBP1-204ENST00000625964 C1orf229Q6ZS94 237 aaPredicted RBP8.11□□□□□ -1.11
VBP1-204ENST00000625964 GNB5O14775 395 aa8.1□□□□□ -1.11
VBP1-204ENST00000625964 MCCD1P59942 119 aaPredicted RBP8.1□□□□□ -1.11
VBP1-204ENST00000625964 C1QTNF9BB2RNN3 333 aa8.09□□□□□ -1.11
VBP1-204ENST00000625964 USP17L8P0C7I0 530 aa8.09□□□□□ -1.11
VBP1-204ENST00000625964 FBXO31Q5XUX0 539 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms