RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 EDC4Q6P2E9 1401 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-221ENST00000625705 USP21Q9UK80 565 aa9.98□□□□□ -0.81
NPLOC4-221ENST00000625705 CCDC9Q9Y3X0 531 aaKnown RBP9.98□□□□□ -0.81
NPLOC4-221ENST00000625705 PIK3C2AO00443 1686 aa9.98□□□□□ -0.81
NPLOC4-221ENST00000625705 TTC21BQ7Z4L5 1316 aa9.98□□□□□ -0.81
NPLOC4-221ENST00000625705 ANKRD36BQ8N2N9 1353 aa9.98□□□□□ -0.81
NPLOC4-221ENST00000625705 MYOM1P52179 1685 aa9.97□□□□□ -0.81
NPLOC4-221ENST00000625705 PLCH1Q4KWH8 1693 aa9.97□□□□□ -0.81
NPLOC4-221ENST00000625705 CRYBG1Q9Y4K1 1723 aa9.97□□□□□ -0.81
NPLOC4-221ENST00000625705 PPP1R37O75864 691 aa9.96□□□□□ -0.82
NPLOC4-221ENST00000625705 ZEB1P37275 1124 aaPredicted RBP9.96□□□□□ -0.82
NPLOC4-221ENST00000625705 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-221ENST00000625705 CD163L1Q9NR16 1453 aa9.96□□□□□ -0.82
NPLOC4-221ENST00000625705 COL14A1Q05707 1796 aaKnown RBP9.96□□□□□ -0.82
NPLOC4-221ENST00000625705 NME9Q86XW9 330 aa9.95□□□□□ -0.82
NPLOC4-221ENST00000625705 SPNS2Q8IVW8 549 aa9.95□□□□□ -0.82
NPLOC4-221ENST00000625705 ERBB3P21860 1342 aa9.95□□□□□ -0.82
NPLOC4-221ENST00000625705 KIAA0232Q92628 1395 aa9.95□□□□□ -0.82
NPLOC4-221ENST00000625705 KIF20BQ96Q89 1820 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 NWD2Q9ULI1 1742 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 SSH2Q76I76 1423 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 USP19O94966 1318 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 A0A0G2JS52 829 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 MYT1Q01538 1121 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 CHRNA2Q15822 529 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 HS6ST3Q8IZP7 471 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 KCNH5Q8NCM2 988 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 COG3Q96JB2 828 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 ZSWIM6Q9HCJ5 1215 aa9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 TRPC5Q9UL62 973 aaPredicted RBP9.94□□□□□ -0.82
NPLOC4-221ENST00000625705 SLIT3O75094 1523 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 NSD3Q9BZ95 1437 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 C2orf72A6NCS6 295 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 GCP02774 474 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 RXRBP28702 533 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 EVA1CP58658 441 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 GPR153Q6NV75 609 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 POTEAQ6S8J7 498 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 KRTAP3-3Q9BYR6 98 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 KRTAP3-2Q9BYR7 98 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 QTRT2Q9H974 415 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 STRN4Q9NRL3 753 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 BTG4Q9NY30 223 aa9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 RGS17Q9UGC6 210 aaPredicted RBP9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.93□□□□□ -0.82
NPLOC4-221ENST00000625705 FAM83GA6ND36 823 aa9.92□□□□□ -0.82
NPLOC4-221ENST00000625705 KIF3CO14782 793 aa9.92□□□□□ -0.82
NPLOC4-221ENST00000625705 UNC5CLQ8IV45 518 aa9.92□□□□□ -0.82
NPLOC4-221ENST00000625705 FNBP4Q8N3X1 1017 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-221ENST00000625705 CGNL1Q0VF96 1302 aa9.91□□□□□ -0.82
NPLOC4-221ENST00000625705 KIF7Q2M1P5 1343 aa9.91□□□□□ -0.82
NPLOC4-221ENST00000625705 ARSIQ5FYB1 569 aa9.91□□□□□ -0.82
NPLOC4-221ENST00000625705 SLIT2O94813 1529 aa9.91□□□□□ -0.82
NPLOC4-221ENST00000625705 NRAPQ86VF7 1730 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 CPDO75976 1380 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 USP54Q70EL1 1684 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 VARS2Q5ST30 1063 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 ILDR2Q71H61 639 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 GGNBP2Q9H3C7 697 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 PANK3Q9H999 370 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 LTN1O94822 1766 aa9.9□□□□□ -0.82
NPLOC4-221ENST00000625705 BCL9LQ86UU0 1499 aa9.9□□□□□ -0.83
NPLOC4-221ENST00000625705 OVOS2A0A0J9YW53 1432 aa9.9□□□□□ -0.83
NPLOC4-221ENST00000625705 ATRNO75882 1429 aa9.9□□□□□ -0.83
NPLOC4-221ENST00000625705 OVOS2Q6IE36 1432 aa9.9□□□□□ -0.83
NPLOC4-221ENST00000625705 USP31Q70CQ4 1352 aa9.89□□□□□ -0.83
NPLOC4-221ENST00000625705 C11orf95C9JLR9 678 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-221ENST00000625705 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
NPLOC4-221ENST00000625705 MMRN1Q13201 1228 aa9.89□□□□□ -0.83
NPLOC4-221ENST00000625705 KHSRPQ92945 711 aaKnown RBP eCLIP9.89□□□□□ -0.83
NPLOC4-221ENST00000625705 KNSTRNQ9Y448 316 aa9.89□□□□□ -0.83
NPLOC4-221ENST00000625705 CCDC7Q96M83 1385 aa9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 NFAT5O94916 1531 aa9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 VPS72Q15906 364 aa9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 TMC2Q8TDI7 906 aa9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 GJD4Q96KN9 370 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 USP35Q9P2H5 1018 aa9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 AATKQ6ZMQ8 1374 aa9.88□□□□□ -0.83
NPLOC4-221ENST00000625705 LMO7Q8WWI1 1683 aa9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 FYB1O15117 783 aa9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 AMPHP49418 695 aa9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 CNGB1Q14028 1251 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 CARD14Q9BXL6 1004 aa9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 ANKRD26Q9UPS8 1709 aa9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 CAMTA1Q9Y6Y1 1673 aa9.87□□□□□ -0.83
NPLOC4-221ENST00000625705 CDK12Q9NYV4 1490 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-221ENST00000625705 RGS12O14924 1447 aa9.86□□□□□ -0.83
NPLOC4-221ENST00000625705 TNNT2P45379 298 aaPredicted RBP9.86□□□□□ -0.83
NPLOC4-221ENST00000625705 TOM1L2Q6ZVM7 507 aa9.86□□□□□ -0.83
NPLOC4-221ENST00000625705 ARHGEF25Q86VW2 580 aa9.86□□□□□ -0.83
NPLOC4-221ENST00000625705 RGPD5Q99666 1765 aa9.86□□□□□ -0.83
NPLOC4-221ENST00000625705 COL5A2P05997 1499 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-221ENST00000625705 WASHC2AQ641Q2 1341 aa9.85□□□□□ -0.83
NPLOC4-221ENST00000625705 GLI3P10071 1580 aa9.85□□□□□ -0.83
NPLOC4-221ENST00000625705 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
NPLOC4-221ENST00000625705 ABCC6O95255 1503 aa9.85□□□□□ -0.83
NPLOC4-221ENST00000625705 NSD2O96028 1365 aa9.85□□□□□ -0.83
NPLOC4-221ENST00000625705 CRB1P82279 1406 aa9.84□□□□□ -0.83
NPLOC4-221ENST00000625705 SMG6Q86US8 1419 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms