RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	MSH5	O43196	834 aa		20.57	■□□□□ 0.88
PPA1-206	ENST00000625364	EDC4	Q6P2E9	1401 aa	Known RBP	20.57	■□□□□ 0.88
PPA1-206	ENST00000625364	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	20.56	■□□□□ 0.88
PPA1-206	ENST00000625364	LTV1	Q96GA3	475 aa	Predicted RBP	20.56	■□□□□ 0.88
PPA1-206	ENST00000625364	CCNL1	Q9UK58	526 aa	Predicted RBP	20.56	■□□□□ 0.88
PPA1-206	ENST00000625364	TMC1	Q8TDI8	760 aa		20.55	■□□□□ 0.88
PPA1-206	ENST00000625364	IP6K1	Q92551	441 aa		20.55	■□□□□ 0.88
PPA1-206	ENST00000625364	MSL1	Q68DK7	614 aa		20.54	■□□□□ 0.88
PPA1-206	ENST00000625364	COL23A1	Q86Y22	540 aa	Predicted RBP	20.54	■□□□□ 0.88
PPA1-206	ENST00000625364	GPBP1L1	Q9HC44	474 aa	Predicted RBP	20.54	■□□□□ 0.88
PPA1-206	ENST00000625364	RGPD2	P0DJD1	1756 aa		20.51	■□□□□ 0.87
PPA1-206	ENST00000625364	ADCY9	O60503	1353 aa		20.51	■□□□□ 0.87
PPA1-206	ENST00000625364	USP47	Q96K76	1375 aa		20.51	■□□□□ 0.87
PPA1-206	ENST00000625364	C5	P01031	1676 aa		20.51	■□□□□ 0.87
PPA1-206	ENST00000625364		A0A1W2PP64	1363 aa		20.5	■□□□□ 0.87
PPA1-206	ENST00000625364	MEGF6	O75095	1541 aa		20.5	■□□□□ 0.87
PPA1-206	ENST00000625364	HSPA6	P17066	643 aa		20.5	■□□□□ 0.87
PPA1-206	ENST00000625364	ZCRB1	Q8TBF4	217 aa	Known RBP	20.5	■□□□□ 0.87
PPA1-206	ENST00000625364	SLC12A5	Q9H2X9	1139 aa		20.5	■□□□□ 0.87
PPA1-206	ENST00000625364	ZNF526	Q8TF50	670 aa	Predicted RBP	20.49	■□□□□ 0.87
PPA1-206	ENST00000625364	TERF2IP	Q9NYB0	399 aa		20.49	■□□□□ 0.87
PPA1-206	ENST00000625364	CD2AP	Q9Y5K6	639 aa		20.49	■□□□□ 0.87
PPA1-206	ENST00000625364	TAF1L	Q8IZX4	1826 aa		20.46	■□□□□ 0.87
PPA1-206	ENST00000625364	HOXC9	P31274	260 aa		20.46	■□□□□ 0.87
PPA1-206	ENST00000625364	SIN3A	Q96ST3	1273 aa		20.46	■□□□□ 0.87
PPA1-206	ENST00000625364	MAP3K19	Q56UN5	1328 aa		20.46	■□□□□ 0.87
PPA1-206	ENST00000625364	AMPH	P49418	695 aa		20.44	■□□□□ 0.86
PPA1-206	ENST00000625364	FLAD1	Q8NFF5	587 aa		20.44	■□□□□ 0.86
PPA1-206	ENST00000625364	COG3	Q96JB2	828 aa		20.43	■□□□□ 0.86
PPA1-206	ENST00000625364	HMGB2	P26583	209 aa	Known RBP	20.42	■□□□□ 0.86
PPA1-206	ENST00000625364	NEUROD1	Q13562	356 aa		20.42	■□□□□ 0.86
PPA1-206	ENST00000625364	CARD11	Q9BXL7	1154 aa		20.42	■□□□□ 0.86
PPA1-206	ENST00000625364	PALLD	Q8WX93	1383 aa		20.41	■□□□□ 0.86
PPA1-206	ENST00000625364	RTL1	A6NKG5	1358 aa		20.4	■□□□□ 0.86
PPA1-206	ENST00000625364	C4B	P0C0L5	1744 aa		20.4	■□□□□ 0.86
PPA1-206	ENST00000625364	CGNL1	Q0VF96	1302 aa		20.4	■□□□□ 0.86
PPA1-206	ENST00000625364	IGSF1	Q8N6C5	1336 aa		20.4	■□□□□ 0.86
PPA1-206	ENST00000625364	WWC3	Q9ULE0	1092 aa		20.39	■□□□□ 0.85
PPA1-206	ENST00000625364	TOGARAM1	Q9Y4F4	1720 aa		20.39	■□□□□ 0.85
PPA1-206	ENST00000625364	FBLN1	P23142	703 aa		20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	NBPF6	Q5VWK0	638 aa		20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	USHBP1	Q8N6Y0	703 aa		20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	RAPGEF4	Q8WZA2	1011 aa		20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	NBPF4	Q96M43	638 aa		20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	PUS7	Q96PZ0	661 aa	Known RBP	20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	UBR3	Q6ZT12	1888 aa		20.38	■□□□□ 0.85
PPA1-206	ENST00000625364	SMG6	Q86US8	1419 aa	Known RBP	20.37	■□□□□ 0.85
PPA1-206	ENST00000625364	AK7	Q96M32	723 aa		20.37	■□□□□ 0.85
PPA1-206	ENST00000625364	PCDH11X	Q9BZA7	1347 aa		20.36	■□□□□ 0.85
PPA1-206	ENST00000625364	PCDH11Y	Q9BZA8	1340 aa		20.36	■□□□□ 0.85
PPA1-206	ENST00000625364	KIF3C	O14782	793 aa		20.36	■□□□□ 0.85
PPA1-206	ENST00000625364	NSD3	Q9BZ95	1437 aa		20.36	■□□□□ 0.85
PPA1-206	ENST00000625364	ITGB4	P16144	1822 aa		20.35	■□□□□ 0.85
PPA1-206	ENST00000625364	TAT	P17735	454 aa	Predicted RBP	20.35	■□□□□ 0.85
PPA1-206	ENST00000625364	MPRIP	Q6WCQ1	1025 aa		20.35	■□□□□ 0.85
PPA1-206	ENST00000625364	CIC	Q96RK0	1608 aa	Predicted RBP	20.35	■□□□□ 0.85
PPA1-206	ENST00000625364	PHF14	O94880	888 aa		20.34	■□□□□ 0.85
PPA1-206	ENST00000625364	RRS1	Q15050	365 aa	Known RBP	20.34	■□□□□ 0.85
PPA1-206	ENST00000625364	AMIGO3	Q86WK7	504 aa		20.34	■□□□□ 0.85
PPA1-206	ENST00000625364	APLP1	P51693	650 aa		20.32	■□□□□ 0.84
PPA1-206	ENST00000625364	SMARCC1	Q92922	1105 aa	Predicted RBP	20.32	■□□□□ 0.84
PPA1-206	ENST00000625364	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	20.31	■□□□□ 0.84
PPA1-206	ENST00000625364	SMIM5	Q71RC9	77 aa		20.3	■□□□□ 0.84
PPA1-206	ENST00000625364	PKD1L3	Q7Z443	1732 aa		20.28	■□□□□ 0.84
PPA1-206	ENST00000625364	MAP2	P11137	1827 aa	Known RBP	20.28	■□□□□ 0.84
PPA1-206	ENST00000625364	CYP27B1	O15528	508 aa		20.28	■□□□□ 0.84
PPA1-206	ENST00000625364	SSFA2	P28290	1259 aa		20.28	■□□□□ 0.84
PPA1-206	ENST00000625364	INSR	P06213	1382 aa		20.27	■□□□□ 0.84
PPA1-206	ENST00000625364	KIF13B	Q9NQT8	1826 aa		20.26	■□□□□ 0.83
PPA1-206	ENST00000625364	GGNBP2	Q9H3C7	697 aa		20.26	■□□□□ 0.83
PPA1-206	ENST00000625364	PXDNL	A1KZ92	1463 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	FLT4	P35916	1363 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	TOMM70	O94826	608 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	HSP90AB2P	Q58FF8	381 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	LINC00116	Q8NCU8	138 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	PIGB	Q92521	554 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	TESK2	Q96S53	571 aa		20.25	■□□□□ 0.83
PPA1-206	ENST00000625364	KIAA1551	Q9HCM1	1747 aa		20.24	■□□□□ 0.83
PPA1-206	ENST00000625364	N4BP2	Q86UW6	1770 aa	Predicted RBP	20.24	■□□□□ 0.83
PPA1-206	ENST00000625364	LOC102724428	A0A0B4J2F2	783 aa		20.24	■□□□□ 0.83
PPA1-206	ENST00000625364	SIK1	P57059	783 aa		20.24	■□□□□ 0.83
PPA1-206	ENST00000625364	KIF20B	Q96Q89	1820 aa		20.23	■□□□□ 0.83
PPA1-206	ENST00000625364	FYB1	O15117	783 aa		20.23	■□□□□ 0.83
PPA1-206	ENST00000625364	GNPAT	O15228	680 aa		20.23	■□□□□ 0.83
PPA1-206	ENST00000625364	DNAJC5G	Q8N7S2	189 aa		20.23	■□□□□ 0.83
PPA1-206	ENST00000625364	WDR90	Q96KV7	1748 aa		20.22	■□□□□ 0.83
PPA1-206	ENST00000625364	MMP10	P09238	476 aa		20.22	■□□□□ 0.83
PPA1-206	ENST00000625364	KIF24	Q5T7B8	1368 aa		20.21	■□□□□ 0.83
PPA1-206	ENST00000625364	ST20-MTHFS	A0A0A6YYL1	179 aa		20.21	■□□□□ 0.83
PPA1-206	ENST00000625364	BCS1L	Q9Y276	419 aa		20.2	■□□□□ 0.82
PPA1-206	ENST00000625364	SLC24A1	O60721	1099 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	ITPK1	Q13572	414 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	NKX1-1	Q15270	411 aa	Predicted RBP	20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	NMRK2	Q9NPI5	230 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	TMOD3	Q9NYL9	352 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	PCNT	O95613	3336 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	TONSL	Q96HA7	1378 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	C10orf71	Q711Q0	1435 aa		20.19	■□□□□ 0.82
PPA1-206	ENST00000625364	TGFB2	P61812	414 aa		20.18	■□□□□ 0.82
PPA1-206	ENST00000625364	NCAPD2	Q15021	1401 aa		20.18	■□□□□ 0.82

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms