RNA–Protein interactions for RNA: ENST00000624909.1

PCDHB9-203, Transcript of protocadherin beta 9, humanhuman

TSL 3

Gene PCDHB9, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-203ENST00000624909 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 PDE4AP27815 886 aa11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 NUTM2GQ5VZR2 741 aa11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 ARHGEF25Q86VW2 580 aa11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 PDCD7Q8N8D1 485 aaKnown RBP11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 C8orf37Q96NL8 207 aa11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
PCDHB9-203ENST00000624909 KIAA0232Q92628 1395 aa11.02□□□□□ -0.65
PCDHB9-203ENST00000624909 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 SLIT2O94813 1529 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 ZNF316A6NFI3 1004 aaPredicted RBP11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 PLCG2P16885 1265 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 UNC5CLQ8IV45 518 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 USP21Q9UK80 565 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 AFF2P51816 1311 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 PHRF1Q9P1Y6 1649 aaKnown RBP11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 MARF1Q9Y4F3 1742 aaKnown RBP11.01□□□□□ -0.65
PCDHB9-203ENST00000624909 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
PCDHB9-203ENST00000624909 ZC3H6P61129 1189 aaKnown RBP11□□□□□ -0.65
PCDHB9-203ENST00000624909 GGNBP2Q9H3C7 697 aa11□□□□□ -0.65
PCDHB9-203ENST00000624909 RTL1A6NKG5 1358 aa11□□□□□ -0.65
PCDHB9-203ENST00000624909 NFAT5O94916 1531 aa10.99□□□□□ -0.65
PCDHB9-203ENST00000624909 NWD2Q9ULI1 1742 aa10.99□□□□□ -0.65
PCDHB9-203ENST00000624909 DPY19L2Q6NUT2 758 aa10.99□□□□□ -0.65
PCDHB9-203ENST00000624909 MORC1Q86VD1 984 aa10.99□□□□□ -0.65
PCDHB9-203ENST00000624909 CRISPLD2Q9H0B8 497 aa10.99□□□□□ -0.65
PCDHB9-203ENST00000624909 BLMP54132 1417 aaPredicted RBP10.99□□□□□ -0.65
PCDHB9-203ENST00000624909 G3V3G9 751 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 VPS72Q15906 364 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 SLC39A7Q92504 469 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 IP6K1Q92551 441 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 LARP6Q9BRS8 491 aaKnown RBP10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 BTG4Q9NY30 223 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 BCL9LQ86UU0 1499 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 KIF20BQ96Q89 1820 aa10.98□□□□□ -0.65
PCDHB9-203ENST00000624909 SEC24BO95487 1268 aa10.97□□□□□ -0.65
PCDHB9-203ENST00000624909 EVA1CP58658 441 aa10.97□□□□□ -0.65
PCDHB9-203ENST00000624909 RBM6P78332 1123 aaKnown RBP10.97□□□□□ -0.65
PCDHB9-203ENST00000624909 MICALL2Q8IY33 904 aa10.97□□□□□ -0.65
PCDHB9-203ENST00000624909 QTRT2Q9H974 415 aaKnown RBP10.97□□□□□ -0.65
PCDHB9-203ENST00000624909 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
PCDHB9-203ENST00000624909 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 ATRNO75882 1429 aa10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 FLT4P35916 1363 aa10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 RXRBP28702 533 aa10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 AMPHP49418 695 aa10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 MFSD10Q14728 455 aa10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 PELP1Q8IZL8 1130 aaKnown RBP10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.65
PCDHB9-203ENST00000624909 CDK12Q9NYV4 1490 aaPredicted RBP10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 MAP3K19Q56UN5 1328 aa10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 E2F4Q16254 413 aa10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 DDX27Q96GQ7 796 aaKnown RBP10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 GJD4Q96KN9 370 aaPredicted RBP10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 CDCA7Q9BWT1 371 aaPredicted RBP10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 RGS17Q9UGC6 210 aaPredicted RBP10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 BOLA1Q9Y3E2 137 aa10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 ANKRD26Q9UPS8 1709 aa10.95□□□□□ -0.66
PCDHB9-203ENST00000624909 SMG6Q86US8 1419 aaKnown RBP10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 INSRP06213 1382 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 WDR17Q8IZU2 1322 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 ONECUT3O60422 494 aaPredicted RBP10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 C7P10643 843 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 HOXC9P31274 260 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 DDX10Q13206 875 aaKnown RBP10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 RALBP1Q15311 655 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 CHRNA2Q15822 529 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 POLKQ9UBT6 870 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 LMO7Q8WWI1 1683 aa10.94□□□□□ -0.66
PCDHB9-203ENST00000624909 COL5A2P05997 1499 aaPredicted RBP10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 ERBB3P21860 1342 aa10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 CAMTA1Q9Y6Y1 1673 aa10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 BARGINQ6ZT62 677 aa10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 CARD10Q9BWT7 1032 aa10.93□□□□□ -0.66
PCDHB9-203ENST00000624909 CRB1P82279 1406 aa10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 PLEKHG2Q9H7P9 1386 aa10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 PLCH1Q4KWH8 1693 aa10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 SPATA31A1Q5TZJ5 1347 aa10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 CC2D1BQ5T0F9 858 aaKnown RBP10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 TMEM121BQ9BXQ6 578 aaPredicted RBP10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 COL18A1P39060 1754 aa10.92□□□□□ -0.66
PCDHB9-203ENST00000624909 CSB-PGBD3P0DP91 1061 aa10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 RRS1Q15050 365 aaKnown RBP10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 POTEAQ6S8J7 498 aa10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 TOM1L2Q6ZVM7 507 aa10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 TCP11L2Q8N4U5 519 aa10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 ANKRD24Q8TF21 1146 aa10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 GPHNQ9NQX3 736 aaPredicted RBP10.91□□□□□ -0.66
PCDHB9-203ENST00000624909 ZBTB7CA1YPR0 619 aa10.9□□□□□ -0.66
PCDHB9-203ENST00000624909 ARHGEF1Q92888 912 aaKnown RBP10.9□□□□□ -0.66
PCDHB9-203ENST00000624909 STRN4Q9NRL3 753 aa10.9□□□□□ -0.66
PCDHB9-203ENST00000624909 CCDC9Q9Y3X0 531 aaKnown RBP10.9□□□□□ -0.66
PCDHB9-203ENST00000624909 LTN1O94822 1766 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms