RNA–Protein interactions for RNA: ENST00000623935.1

SOX9-AS1-217, SOX9 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene SOX9-AS1, Length 1,563 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-217ENST00000623935 SENP3-EIF4A1A0A087X0R7 540 aa11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 COL5A2P05997 1499 aaPredicted RBP11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 TMPOP42166 694 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 RIPK4P57078 832 aa11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 PDE3BQ13370 1112 aa11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 GAS2L2Q8NHY3 880 aa11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 NGLY1Q96IV0 654 aa11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 RRP7AQ9Y3A4 280 aaKnown RBP11.2□□□□□ -0.62
SOX9-AS1-217ENST00000623935 RGPD2P0DJD1 1756 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 TATP17735 454 aaPredicted RBP11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 NFE2L2Q16236 605 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 AMOTQ4VCS5 1084 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 FBXO41Q8TF61 875 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 PHACTR3Q96KR7 559 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 C8orf37Q96NL8 207 aa11.19□□□□□ -0.62
SOX9-AS1-217ENST00000623935 CRB1P82279 1406 aa11.18□□□□□ -0.62
SOX9-AS1-217ENST00000623935 CALD1Q05682 793 aaKnown RBP11.18□□□□□ -0.62
SOX9-AS1-217ENST00000623935 CARD10Q9BWT7 1032 aa11.18□□□□□ -0.62
SOX9-AS1-217ENST00000623935 PLCH1Q4KWH8 1693 aa11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 LARP1Q6PKG0 1096 aaKnown RBP11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 WWC1Q8IX03 1113 aa11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 RTF1Q92541 710 aaKnown RBP11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 PLEKHG2Q9H7P9 1386 aa11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 NWD2Q9ULI1 1742 aa11.17□□□□□ -0.62
SOX9-AS1-217ENST00000623935 USP35Q9P2H5 1018 aa11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 SPG7Q9UQ90 795 aa11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 CCDC9Q9Y3X0 531 aaKnown RBP11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 NCAPD2Q15021 1401 aa11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 TULP1O00294 542 aaPredicted RBP11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 MTHFSDQ2M296 383 aaKnown RBP11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 C1orf141Q5JVX7 400 aa11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
SOX9-AS1-217ENST00000623935 HTATSF1O43719 755 aaKnown RBP11.15□□□□□ -0.62
SOX9-AS1-217ENST00000623935 IL2RBP14784 551 aa11.15□□□□□ -0.62
SOX9-AS1-217ENST00000623935 UNC5CLQ8IV45 518 aa11.15□□□□□ -0.62
SOX9-AS1-217ENST00000623935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.15□□□□□ -0.62
SOX9-AS1-217ENST00000623935 SLIT2O94813 1529 aa11.14□□□□□ -0.63
SOX9-AS1-217ENST00000623935 GNAT3A8MTJ3 354 aa11.14□□□□□ -0.63
SOX9-AS1-217ENST00000623935 E9PSI1 815 aa11.14□□□□□ -0.63
SOX9-AS1-217ENST00000623935 VSIG10Q8N0Z9 540 aa11.14□□□□□ -0.63
SOX9-AS1-217ENST00000623935 USP21Q9UK80 565 aa11.14□□□□□ -0.63
SOX9-AS1-217ENST00000623935 THRAP3Q9Y2W1 955 aaKnown RBP11.14□□□□□ -0.63
SOX9-AS1-217ENST00000623935 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 FNBP4Q8N3X1 1017 aaPredicted RBP11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 MYH16Q9H6N6 1097 aa11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 PARP4Q9UKK3 1724 aaKnown RBP11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 LRP6O75581 1613 aa11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 DLG5Q8TDM6 1919 aa11.13□□□□□ -0.63
SOX9-AS1-217ENST00000623935 MAP3K5Q99683 1374 aa11.12□□□□□ -0.63
SOX9-AS1-217ENST00000623935 ZNF521Q96K83 1311 aa11.12□□□□□ -0.63
SOX9-AS1-217ENST00000623935 NRAPQ86VF7 1730 aa11.12□□□□□ -0.63
SOX9-AS1-217ENST00000623935 AKAP4Q5JQC9 854 aa11.12□□□□□ -0.63
SOX9-AS1-217ENST00000623935 TRIM35Q9UPQ4 493 aa11.12□□□□□ -0.63
SOX9-AS1-217ENST00000623935 IL16Q14005 1332 aa11.12□□□□□ -0.63
SOX9-AS1-217ENST00000623935 HSP90AB1P08238 724 aaKnown RBP11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 ZCRB1Q8TBF4 217 aaKnown RBP11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 SPATA31A1Q5TZJ5 1347 aa11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 PCDH11XQ9BZA7 1347 aa11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 PCDH11YQ9BZA8 1340 aa11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 VPS72Q15906 364 aa11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 MEGF6O75095 1541 aa11.11□□□□□ -0.63
SOX9-AS1-217ENST00000623935 OVOS2A0A0G2JMS6 1433 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 AFF2P51816 1311 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 SPATA31A5Q5VU36 1347 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 SPATA31A7Q8IWB4 1347 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 GNAI1P63096 354 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 SLFN5Q08AF3 891 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 LAS1LQ9Y4W2 734 aaKnown RBP11.1□□□□□ -0.63
SOX9-AS1-217ENST00000623935 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
SOX9-AS1-217ENST00000623935 BCL9LQ86UU0 1499 aa11.09□□□□□ -0.63
SOX9-AS1-217ENST00000623935 EXOC5O00471 708 aa11.09□□□□□ -0.63
SOX9-AS1-217ENST00000623935 MCM10Q7L590 875 aa11.09□□□□□ -0.63
SOX9-AS1-217ENST00000623935 IFT57Q9NWB7 429 aa11.09□□□□□ -0.63
SOX9-AS1-217ENST00000623935 TRPC5Q9UL62 973 aaPredicted RBP11.09□□□□□ -0.63
SOX9-AS1-217ENST00000623935 A0A0G2JS52 829 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 MYT1Q01538 1121 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 TEFQ10587 303 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 DCTN1Q14203 1278 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 BARGINQ6ZT62 677 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 CFAP44Q96MT7 982 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 PKD1L3Q7Z443 1732 aa11.08□□□□□ -0.64
SOX9-AS1-217ENST00000623935 PHKG2P15735 406 aa11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 DDB1Q16531 1140 aa11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 MPRIPQ6WCQ1 1025 aa11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 DDX54Q8TDD1 881 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 RBM42Q9BTD8 480 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 THUMPD2Q9BTF0 503 aaKnown RBP11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 DUSP27Q5VZP5 1158 aa11.07□□□□□ -0.64
SOX9-AS1-217ENST00000623935 RNMTO43148 476 aaKnown RBP11.06□□□□□ -0.64
SOX9-AS1-217ENST00000623935 ABCB7O75027 752 aa11.06□□□□□ -0.64
SOX9-AS1-217ENST00000623935 TAF7Q15545 349 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 232.7 ms