RNA–Protein interactions for RNA: ENST00000623385.3

TRIM39-RPP21-201, Transcript of TRIM39-RPP21 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM39-RPP21, Length 1,698 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-RPP21-201ENST00000623385 TATP17735 454 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 MTHFSDQ2M296 383 aaKnown RBP17.41■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 PHF23Q9BUL5 403 aaPredicted RBP17.41■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 ONECUT3O60422 494 aaPredicted RBP17.4■□□□□ 0.38
TRIM39-RPP21-201ENST00000623385 APAF1O14727 1248 aa17.39■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 THSD7AQ9UPZ6 1657 aa17.39■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 PARP4Q9UKK3 1724 aaKnown RBP17.39■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 PKD1L3Q7Z443 1732 aa17.38■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 RBM6P78332 1123 aaKnown RBP17.38■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 LRRC37A3O60309 1634 aa17.37■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 SHANK3Q9BYB0 1731 aa17.37■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 ZCRB1Q8TBF4 217 aaKnown RBP17.37■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 PNNQ9H307 717 aaKnown RBP17.37■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 MAPK8IP3Q9UPT6 1336 aa17.37■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 PLEKHG2Q9H7P9 1386 aa17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 CYP27B1O15528 508 aa17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 PLEKHO1Q53GL0 409 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 RXRBP28702 533 aa17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 AMOTQ4VCS5 1084 aa17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 SEPT12Q8IYM1 358 aa17.36■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 NFE2L2Q16236 605 aa17.35■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 SPG7Q9UQ90 795 aa17.35■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 TNS2Q63HR2 1409 aa17.35■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 EXOC5O00471 708 aa17.34■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 DDB1Q16531 1140 aa17.34■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 ZNF530Q6P9A1 599 aaPredicted RBP17.34■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 A0A0G2JS52 829 aa17.33■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 PHKG2P15735 406 aa17.33■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 MYT1Q01538 1121 aa17.33■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 GAS2L2Q8NHY3 880 aa17.33■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.37
TRIM39-RPP21-201ENST00000623385 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 SALL2Q9Y467 1007 aaPredicted RBP17.32■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 RGS12O14924 1447 aa17.32■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 NEFMP07197 916 aa17.32■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 RIPK4P57078 832 aa17.32■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 PCDH11XQ9BZA7 1347 aa17.31■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 PCDH11YQ9BZA8 1340 aa17.31■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 AKAP4Q5JQC9 854 aa17.3■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 IFNL2Q8IZJ0 200 aa17.3■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 HNRNPUQ00839 825 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 IL17REQ8NFR9 667 aa17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 LGR6Q9HBX8 967 aa17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 DLG5Q8TDM6 1919 aa17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 KDM6AO15550 1401 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 GNAT3A8MTJ3 354 aa17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 NKX1-1Q15270 411 aaPredicted RBP17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 FAM182BQ5T319 152 aa17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 MCM10Q7L590 875 aa17.28■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 BRWD3Q6RI45 1802 aa17.28■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 YTHDC1Q96MU7 727 aaKnown RBP17.27■□□□□ 0.36
TRIM39-RPP21-201ENST00000623385 ADAMTS7Q9UKP4 1686 aa17.27■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 ZNF521Q96K83 1311 aa17.26■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 PDE3BQ13370 1112 aa17.26■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 CCDC27Q2M243 656 aa17.26■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 WWC1Q8IX03 1113 aa17.26■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 CEMIPQ8WUJ3 1361 aa17.25■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 HTATSF1O43719 755 aaKnown RBP17.25■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 NCBP3Q53F19 620 aaKnown RBP17.25■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 KRT27Q7Z3Y8 459 aa17.25■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 HSP90AB1P08238 724 aaKnown RBP17.23■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 RTF1Q92541 710 aaKnown RBP17.23■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 LMOD3Q0VAK6 560 aa17.22■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 SCN11AQ9UI33 1791 aa17.22■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 PTF1AQ7RTS3 328 aa17.21■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 NGEFQ8N5V2 710 aa17.21■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
TRIM39-RPP21-201ENST00000623385 BCL9O00512 1426 aa17.2■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 MRC1P22897 1456 aa17.2■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 KCNQ2O43526 872 aa17.2■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 CENPBP07199 599 aaPredicted RBP17.2■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 ACSBG1Q96GR2 724 aa17.2■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 EP400Q96L91 3159 aa17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 ZBED9Q6R2W3 1325 aa17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 NFATC2IPQ8NCF5 419 aa17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 SLC52A2Q9HAB3 445 aa17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 ERVV-2B6SEH9 535 aa17.18■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 CDCA7LQ96GN5 454 aa17.18■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 WDR63Q8IWG1 891 aa17.17■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 MIS18AQ9NYP9 233 aa17.17■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 CABP4P57796 275 aa17.16■□□□□ 0.34
TRIM39-RPP21-201ENST00000623385 PIGBQ92521 554 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms