RNA–Protein interactions for RNA: ENST00000623266.1

PCDHB9-202, Transcript of protocadherin beta 9, humanhuman

TSL 4

Gene PCDHB9, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-202ENST00000623266 MTFR1LQ9H019 292 aa12.77□□□□□ -0.37
PCDHB9-202ENST00000623266 YY1P25490 414 aa12.76□□□□□ -0.37
PCDHB9-202ENST00000623266 MYOM1P52179 1685 aa12.76□□□□□ -0.37
PCDHB9-202ENST00000623266 MEGF6O75095 1541 aa12.75□□□□□ -0.37
PCDHB9-202ENST00000623266 NSD2O96028 1365 aa12.75□□□□□ -0.37
PCDHB9-202ENST00000623266 FHDC1Q9C0D6 1143 aaPredicted RBP12.75□□□□□ -0.37
PCDHB9-202ENST00000623266 SLC27A3Q5K4L6 730 aa12.74□□□□□ -0.37
PCDHB9-202ENST00000623266 SYTL4Q96C24 671 aaPredicted RBP12.74□□□□□ -0.37
PCDHB9-202ENST00000623266 TIMELESSQ9UNS1 1208 aa12.74□□□□□ -0.37
PCDHB9-202ENST00000623266 LY75O60449 1722 aa12.74□□□□□ -0.37
PCDHB9-202ENST00000623266 INSRP06213 1382 aa12.73□□□□□ -0.37
PCDHB9-202ENST00000623266 CDCA8Q53HL2 280 aa12.73□□□□□ -0.37
PCDHB9-202ENST00000623266 ARXQ96QS3 562 aa12.73□□□□□ -0.37
PCDHB9-202ENST00000623266 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
PCDHB9-202ENST00000623266 MAP2P11137 1827 aaKnown RBP12.73□□□□□ -0.37
PCDHB9-202ENST00000623266 PNPLA7Q6ZV29 1317 aa12.72□□□□□ -0.37
PCDHB9-202ENST00000623266 DOT1LQ8TEK3 1739 aa12.72□□□□□ -0.37
PCDHB9-202ENST00000623266 PCGF6Q9BYE7 350 aa12.72□□□□□ -0.37
PCDHB9-202ENST00000623266 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
PCDHB9-202ENST00000623266 TUBGCP6Q96RT7 1819 aa12.72□□□□□ -0.37
PCDHB9-202ENST00000623266 COL24A1Q17RW2 1714 aa12.71□□□□□ -0.37
PCDHB9-202ENST00000623266 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
PCDHB9-202ENST00000623266 DCAF8L1A6NGE4 600 aa12.71□□□□□ -0.37
PCDHB9-202ENST00000623266 CYP27B1O15528 508 aa12.71□□□□□ -0.37
PCDHB9-202ENST00000623266 SLC16A10Q8TF71 515 aa12.71□□□□□ -0.37
PCDHB9-202ENST00000623266 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.38
PCDHB9-202ENST00000623266 CGNL1Q0VF96 1302 aa12.7□□□□□ -0.38
PCDHB9-202ENST00000623266 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
PCDHB9-202ENST00000623266 RAPGEF4Q8WZA2 1011 aa12.7□□□□□ -0.38
PCDHB9-202ENST00000623266 COL23A1Q86Y22 540 aaPredicted RBP12.69□□□□□ -0.38
PCDHB9-202ENST00000623266 TFCP2L1Q9NZI6 479 aa12.69□□□□□ -0.38
PCDHB9-202ENST00000623266 POLKQ9UBT6 870 aa12.69□□□□□ -0.38
PCDHB9-202ENST00000623266 FLT4P35916 1363 aa12.69□□□□□ -0.38
PCDHB9-202ENST00000623266 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
PCDHB9-202ENST00000623266 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
PCDHB9-202ENST00000623266 ITGB4P16144 1822 aa12.68□□□□□ -0.38
PCDHB9-202ENST00000623266 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
PCDHB9-202ENST00000623266 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
PCDHB9-202ENST00000623266 PPM1GO15355 546 aaPredicted RBP12.67□□□□□ -0.38
PCDHB9-202ENST00000623266 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
PCDHB9-202ENST00000623266 MPRIPQ6WCQ1 1025 aa12.67□□□□□ -0.38
PCDHB9-202ENST00000623266 EYA1Q99502 592 aa12.67□□□□□ -0.38
PCDHB9-202ENST00000623266 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
PCDHB9-202ENST00000623266 CHD4Q14839 1912 aa12.66□□□□□ -0.38
PCDHB9-202ENST00000623266 CLSPNQ9HAW4 1339 aa12.66□□□□□ -0.38
PCDHB9-202ENST00000623266 TAF1LQ8IZX4 1826 aa12.66□□□□□ -0.38
PCDHB9-202ENST00000623266 MAP3K5Q99683 1374 aa12.66□□□□□ -0.38
PCDHB9-202ENST00000623266 NCAPD2Q15021 1401 aa12.65□□□□□ -0.38
PCDHB9-202ENST00000623266 PIGBQ92521 554 aa12.65□□□□□ -0.38
PCDHB9-202ENST00000623266 HSPA5P11021 654 aaKnown RBP12.64□□□□□ -0.39
PCDHB9-202ENST00000623266 SMIM5Q71RC9 77 aa12.64□□□□□ -0.39
PCDHB9-202ENST00000623266 AMIGO3Q86WK7 504 aa12.64□□□□□ -0.39
PCDHB9-202ENST00000623266 ZNF784Q8NCA9 323 aaPredicted RBP12.64□□□□□ -0.39
PCDHB9-202ENST00000623266 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
PCDHB9-202ENST00000623266 PCDH11XQ9BZA7 1347 aa12.63□□□□□ -0.39
PCDHB9-202ENST00000623266 PCDH11YQ9BZA8 1340 aa12.63□□□□□ -0.39
PCDHB9-202ENST00000623266 SMG6Q86US8 1419 aaKnown RBP12.63□□□□□ -0.39
PCDHB9-202ENST00000623266 NLGN2Q8NFZ4 835 aa12.63□□□□□ -0.39
PCDHB9-202ENST00000623266 POLR3GLQ9BT43 218 aa12.63□□□□□ -0.39
PCDHB9-202ENST00000623266 PANK3Q9H999 370 aa12.63□□□□□ -0.39
PCDHB9-202ENST00000623266 PKD1L3Q7Z443 1732 aa12.62□□□□□ -0.39
PCDHB9-202ENST00000623266 ANKRD26Q9UPS8 1709 aa12.62□□□□□ -0.39
PCDHB9-202ENST00000623266 POLD1P28340 1107 aa12.62□□□□□ -0.39
PCDHB9-202ENST00000623266 TNNT2P45379 298 aaPredicted RBP12.62□□□□□ -0.39
PCDHB9-202ENST00000623266 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
PCDHB9-202ENST00000623266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.62□□□□□ -0.39
PCDHB9-202ENST00000623266 MSH5O43196 834 aa12.61□□□□□ -0.39
PCDHB9-202ENST00000623266 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
PCDHB9-202ENST00000623266 GPR162Q16538 588 aa12.61□□□□□ -0.39
PCDHB9-202ENST00000623266 SPG7Q9UQ90 795 aa12.61□□□□□ -0.39
PCDHB9-202ENST00000623266 C5P01031 1676 aa12.61□□□□□ -0.39
PCDHB9-202ENST00000623266 PALLDQ8WX93 1383 aa12.6□□□□□ -0.39
PCDHB9-202ENST00000623266 PHKG2P15735 406 aa12.6□□□□□ -0.39
PCDHB9-202ENST00000623266 MSL1Q68DK7 614 aa12.6□□□□□ -0.39
PCDHB9-202ENST00000623266 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
PCDHB9-202ENST00000623266 SMARCC1Q92922 1105 aaPredicted RBP12.6□□□□□ -0.39
PCDHB9-202ENST00000623266 ASAP1Q9ULH1 1129 aa12.6□□□□□ -0.39
PCDHB9-202ENST00000623266 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
PCDHB9-202ENST00000623266 YBX3P16989 372 aaKnown RBP eCLIP12.58□□□□□ -0.4
PCDHB9-202ENST00000623266 ITPK1Q13572 414 aa12.58□□□□□ -0.4
PCDHB9-202ENST00000623266 UBR3Q6ZT12 1888 aa12.58□□□□□ -0.4
PCDHB9-202ENST00000623266 ATG3Q9NT62 314 aa12.58□□□□□ -0.4
PCDHB9-202ENST00000623266 C4BP0C0L5 1744 aa12.57□□□□□ -0.4
PCDHB9-202ENST00000623266 LOC102724428A0A0B4J2F2 783 aa12.57□□□□□ -0.4
PCDHB9-202ENST00000623266 SIK1P57059 783 aa12.57□□□□□ -0.4
PCDHB9-202ENST00000623266 LINC00116Q8NCU8 138 aa12.57□□□□□ -0.4
PCDHB9-202ENST00000623266 FLAD1Q8NFF5 587 aa12.57□□□□□ -0.4
PCDHB9-202ENST00000623266 SLC4A9Q96Q91 983 aa12.57□□□□□ -0.4
PCDHB9-202ENST00000623266 IGSF1Q8N6C5 1336 aa12.56□□□□□ -0.4
PCDHB9-202ENST00000623266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.55□□□□□ -0.4
PCDHB9-202ENST00000623266 PELP1Q8IZL8 1130 aaKnown RBP12.55□□□□□ -0.4
PCDHB9-202ENST00000623266 CCER1Q8TC90 406 aaPredicted RBP12.55□□□□□ -0.4
PCDHB9-202ENST00000623266 TMOD3Q9NYL9 352 aa12.55□□□□□ -0.4
PCDHB9-202ENST00000623266 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
PCDHB9-202ENST00000623266 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
PCDHB9-202ENST00000623266 CD2APQ9Y5K6 639 aa12.54□□□□□ -0.4
PCDHB9-202ENST00000623266 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
PCDHB9-202ENST00000623266 PHF14O94880 888 aa12.53□□□□□ -0.4
PCDHB9-202ENST00000623266 MORC1Q86VD1 984 aa12.53□□□□□ -0.4
PCDHB9-202ENST00000623266 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms