RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 SLC24A1O60721 1099 aa22.73■■□□□ 1.23
CD99-211ENST00000623253 RRS1Q15050 365 aaKnown RBP22.73■■□□□ 1.23
CD99-211ENST00000623253 FAM208AQ9UK61 1670 aaKnown RBP22.73■■□□□ 1.23
CD99-211ENST00000623253 MAP3K5Q99683 1374 aa22.73■■□□□ 1.23
CD99-211ENST00000623253 MSH5O43196 834 aa22.72■■□□□ 1.23
CD99-211ENST00000623253 USHBP1Q8N6Y0 703 aa22.71■■□□□ 1.23
CD99-211ENST00000623253 GGNBP2Q9H3C7 697 aa22.71■■□□□ 1.23
CD99-211ENST00000623253 CCNL1Q9UK58 526 aaPredicted RBP22.71■■□□□ 1.23
CD99-211ENST00000623253 NBPF6Q5VWK0 638 aa22.7■■□□□ 1.22
CD99-211ENST00000623253 NBPF4Q96M43 638 aa22.7■■□□□ 1.22
CD99-211ENST00000623253 MEGF6O75095 1541 aa22.69■■□□□ 1.22
CD99-211ENST00000623253 UTRNP46939 3433 aa22.69■■□□□ 1.22
CD99-211ENST00000623253 NSD2O96028 1365 aa22.68■■□□□ 1.22
CD99-211ENST00000623253 RAPGEF4Q8WZA2 1011 aa22.68■■□□□ 1.22
CD99-211ENST00000623253 DOT1LQ8TEK3 1739 aa22.68■■□□□ 1.22
CD99-211ENST00000623253 USP47Q96K76 1375 aa22.67■■□□□ 1.22
CD99-211ENST00000623253 FYB1O15117 783 aa22.67■■□□□ 1.22
CD99-211ENST00000623253 RTL1A6NKG5 1358 aa22.66■■□□□ 1.22
CD99-211ENST00000623253 TMF1P82094 1093 aa22.66■■□□□ 1.22
CD99-211ENST00000623253 RGPD2P0DJD1 1756 aa22.66■■□□□ 1.22
CD99-211ENST00000623253 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
CD99-211ENST00000623253 TATP17735 454 aaPredicted RBP22.65■■□□□ 1.22
CD99-211ENST00000623253 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
CD99-211ENST00000623253 CGNL1Q0VF96 1302 aa22.64■■□□□ 1.22
CD99-211ENST00000623253 CHD4Q14839 1912 aa22.63■■□□□ 1.21
CD99-211ENST00000623253 SENP3-EIF4A1A0A087X0R7 540 aa22.63■■□□□ 1.21
CD99-211ENST00000623253 HSP90AB2PQ58FF8 381 aa22.63■■□□□ 1.21
CD99-211ENST00000623253 COL23A1Q86Y22 540 aaPredicted RBP22.63■■□□□ 1.21
CD99-211ENST00000623253 QSER1Q2KHR3 1735 aa22.62■■□□□ 1.21
CD99-211ENST00000623253 C1QTNF8P60827 252 aa22.62■■□□□ 1.21
CD99-211ENST00000623253 LY75O60449 1722 aa22.61■■□□□ 1.21
CD99-211ENST00000623253 MSL1Q68DK7 614 aa22.61■■□□□ 1.21
CD99-211ENST00000623253 SHANK3Q9BYB0 1731 aa22.61■■□□□ 1.21
CD99-211ENST00000623253 MPRIPQ6WCQ1 1025 aa22.6■■□□□ 1.21
CD99-211ENST00000623253 TUBGCP6Q96RT7 1819 aa22.59■■□□□ 1.21
CD99-211ENST00000623253 PCDH11XQ9BZA7 1347 aa22.58■■□□□ 1.21
CD99-211ENST00000623253 PCDH11YQ9BZA8 1340 aa22.58■■□□□ 1.21
CD99-211ENST00000623253 INSRP06213 1382 aa22.58■■□□□ 1.21
CD99-211ENST00000623253 CDCA8Q53HL2 280 aa22.57■■□□□ 1.2
CD99-211ENST00000623253 FLT4P35916 1363 aa22.56■■□□□ 1.2
CD99-211ENST00000623253 GIGYF1O75420 1035 aaPredicted RBP22.56■■□□□ 1.2
CD99-211ENST00000623253 COL24A1Q17RW2 1714 aa22.56■■□□□ 1.2
CD99-211ENST00000623253 PALLDQ8WX93 1383 aa22.55■■□□□ 1.2
CD99-211ENST00000623253 PPM1GO15355 546 aaPredicted RBP22.55■■□□□ 1.2
CD99-211ENST00000623253 YBX3P16989 372 aaKnown RBP eCLIP22.55■■□□□ 1.22e-6■■■□□ 18.6
CD99-211ENST00000623253 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
CD99-211ENST00000623253 CYP27B1O15528 508 aa22.53■■□□□ 1.2
CD99-211ENST00000623253 HMGB2P26583 209 aaKnown RBP22.53■■□□□ 1.2
CD99-211ENST00000623253 FLAD1Q8NFF5 587 aa22.53■■□□□ 1.2
CD99-211ENST00000623253 EMILIN1Q9Y6C2 1016 aa22.53■■□□□ 1.2
CD99-211ENST00000623253 TRIM26Q12899 539 aaPredicted RBP22.52■■□□□ 1.2
CD99-211ENST00000623253 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
CD99-211ENST00000623253 AK7Q96M32 723 aa22.51■■□□□ 1.19
CD99-211ENST00000623253 CARD14Q9BXL6 1004 aa22.51■■□□□ 1.19
CD99-211ENST00000623253 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
CD99-211ENST00000623253 KIF20BQ96Q89 1820 aa22.5■■□□□ 1.19
CD99-211ENST00000623253 C5P01031 1676 aa22.49■■□□□ 1.19
CD99-211ENST00000623253 NSD3Q9BZ95 1437 aa22.48■■□□□ 1.19
CD99-211ENST00000623253 PHF14O94880 888 aa22.48■■□□□ 1.19
CD99-211ENST00000623253 SPG7Q9UQ90 795 aa22.48■■□□□ 1.19
CD99-211ENST00000623253 CD2APQ9Y5K6 639 aa22.48■■□□□ 1.19
CD99-211ENST00000623253 PIGBQ92521 554 aa22.47■■□□□ 1.19
CD99-211ENST00000623253 SMIM5Q71RC9 77 aa22.46■■□□□ 1.19
CD99-211ENST00000623253 GOLGB1Q14789 3259 aaKnown RBP22.46■■□□□ 1.19
CD99-211ENST00000623253 AMIGO3Q86WK7 504 aa22.44■■□□□ 1.18
CD99-211ENST00000623253 POLR3GLQ9BT43 218 aa22.44■■□□□ 1.18
CD99-211ENST00000623253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
CD99-211ENST00000623253 TMOD3Q9NYL9 352 aa22.43■■□□□ 1.18
CD99-211ENST00000623253 WWC3Q9ULE0 1092 aa22.43■■□□□ 1.18
CD99-211ENST00000623253 WASHC2AQ641Q2 1341 aa22.42■■□□□ 1.18
CD99-211ENST00000623253 NKX1-1Q15270 411 aaPredicted RBP22.42■■□□□ 1.18
CD99-211ENST00000623253 EYA1Q99502 592 aa22.42■■□□□ 1.18
CD99-211ENST00000623253 C4BP0C0L5 1744 aa22.42■■□□□ 1.18
CD99-211ENST00000623253 TOGARAM1Q9Y4F4 1720 aa22.42■■□□□ 1.18
CD99-211ENST00000623253 LOC102724428A0A0B4J2F2 783 aa22.41■■□□□ 1.18
CD99-211ENST00000623253 SIK1P57059 783 aa22.41■■□□□ 1.18
CD99-211ENST00000623253 TAF1LQ8IZX4 1826 aa22.41■■□□□ 1.18
CD99-211ENST00000623253 TNNT2P45379 298 aaPredicted RBP22.4■■□□□ 1.18
CD99-211ENST00000623253 LINC00116Q8NCU8 138 aa22.4■■□□□ 1.18
CD99-211ENST00000623253 ITGB4P16144 1822 aa22.4■■□□□ 1.18
CD99-211ENST00000623253 ATP10DQ9P241 1426 aa22.4■■□□□ 1.18
CD99-211ENST00000623253 ASAP1Q9ULH1 1129 aa22.39■■□□□ 1.17
CD99-211ENST00000623253 PKD1L3Q7Z443 1732 aa22.38■■□□□ 1.17
CD99-211ENST00000623253 GNPATO15228 680 aa22.38■■□□□ 1.17
CD99-211ENST00000623253 SSFA2P28290 1259 aa22.38■■□□□ 1.17
CD99-211ENST00000623253 ATP6V1AP38606 617 aa22.38■■□□□ 1.17
CD99-211ENST00000623253 IFNL2Q8IZJ0 200 aa22.38■■□□□ 1.17
CD99-211ENST00000623253 ZNF526Q8TF50 670 aaPredicted RBP22.38■■□□□ 1.17
CD99-211ENST00000623253 GPBP1L1Q9HC44 474 aaPredicted RBP22.38■■□□□ 1.17
CD99-211ENST00000623253 POLKQ9UBT6 870 aa22.38■■□□□ 1.17
CD99-211ENST00000623253 IGSF1Q8N6C5 1336 aa22.37■■□□□ 1.17
CD99-211ENST00000623253 PHKG2P15735 406 aa22.37■■□□□ 1.17
CD99-211ENST00000623253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.37■■□□□ 1.17
CD99-211ENST00000623253 NCAPD2Q15021 1401 aa22.37■■□□□ 1.17
CD99-211ENST00000623253 ITPK1Q13572 414 aa22.36■■□□□ 1.17
CD99-211ENST00000623253 EIF4A2Q14240 407 aaKnown RBP22.33■■□□□ 1.17
CD99-211ENST00000623253 ATG3Q9NT62 314 aa22.33■■□□□ 1.17
CD99-211ENST00000623253 UBR3Q6ZT12 1888 aa22.32■■□□□ 1.16
CD99-211ENST00000623253 MAP2P11137 1827 aaKnown RBP22.3■■□□□ 1.16
CD99-211ENST00000623253 MMP10P09238 476 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms