RNA–Protein interactions for RNA: ENST00000622961.3

CR381653.1-201, humanhuman

TSL 3 BASIC

Gene CR381653.1, Length 812 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CR381653.1-201ENST00000622961 ITGB4P16144 1822 aa20.75■□□□□ 0.91
CR381653.1-201ENST00000622961 CDCA8Q53HL2 280 aa20.74■□□□□ 0.91
CR381653.1-201ENST00000622961 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
CR381653.1-201ENST00000622961 FLT4P35916 1363 aa20.73■□□□□ 0.91
CR381653.1-201ENST00000622961 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
CR381653.1-201ENST00000622961 STK32BQ9NY57 414 aa20.73■□□□□ 0.91
CR381653.1-201ENST00000622961 TAF1LQ8IZX4 1826 aa20.73■□□□□ 0.91
CR381653.1-201ENST00000622961 INSRP06213 1382 aa20.72■□□□□ 0.91
CR381653.1-201ENST00000622961 KIF24Q5T7B8 1368 aa20.72■□□□□ 0.91
CR381653.1-201ENST00000622961 SLC15A2Q16348 729 aa20.72■□□□□ 0.91
CR381653.1-201ENST00000622961 C5P01031 1676 aa20.72■□□□□ 0.91
CR381653.1-201ENST00000622961 NCAPD2Q15021 1401 aa20.71■□□□□ 0.91
CR381653.1-201ENST00000622961 DDX54Q8TDD1 881 aaKnown RBP20.71■□□□□ 0.91
CR381653.1-201ENST00000622961 ZBTB7AO95365 584 aa20.7■□□□□ 0.9
CR381653.1-201ENST00000622961 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
CR381653.1-201ENST00000622961 NBPF6Q5VWK0 638 aa20.7■□□□□ 0.9
CR381653.1-201ENST00000622961 NBPF4Q96M43 638 aa20.7■□□□□ 0.9
CR381653.1-201ENST00000622961 PCGF6Q9BYE7 350 aa20.7■□□□□ 0.9
CR381653.1-201ENST00000622961 PPP1R1BQ9UD71 204 aaPredicted RBP20.7■□□□□ 0.9
CR381653.1-201ENST00000622961 PTGER2P43116 358 aa20.69■□□□□ 0.9
CR381653.1-201ENST00000622961 ZNF827Q17R98 1081 aa20.69■□□□□ 0.9
CR381653.1-201ENST00000622961 USHBP1Q8N6Y0 703 aa20.69■□□□□ 0.9
CR381653.1-201ENST00000622961 LRRC4BQ9NT99 713 aa20.69■□□□□ 0.9
CR381653.1-201ENST00000622961 HSP90AB2PQ58FF8 381 aa20.67■□□□□ 0.9
CR381653.1-201ENST00000622961 ZCRB1Q8TBF4 217 aaKnown RBP20.66■□□□□ 0.9
CR381653.1-201ENST00000622961 EMILIN1Q9Y6C2 1016 aa20.65■□□□□ 0.9
CR381653.1-201ENST00000622961 CGNL1Q0VF96 1302 aa20.64■□□□□ 0.89
CR381653.1-201ENST00000622961 SGIP1Q9BQI5 828 aa20.64■□□□□ 0.89
CR381653.1-201ENST00000622961 PRIM1P49642 420 aaKnown RBP20.63■□□□□ 0.89
CR381653.1-201ENST00000622961 MTFR1LQ9H019 292 aa20.63■□□□□ 0.89
CR381653.1-201ENST00000622961 ATF5Q9Y2D1 282 aaPredicted RBP20.63■□□□□ 0.89
CR381653.1-201ENST00000622961 AKT1S1Q96B36 256 aa20.62■□□□□ 0.89
CR381653.1-201ENST00000622961 SLC27A3Q5K4L6 730 aa20.61■□□□□ 0.89
CR381653.1-201ENST00000622961 RAPGEF4Q8WZA2 1011 aa20.61■□□□□ 0.89
CR381653.1-201ENST00000622961 SYTL4Q96C24 671 aaPredicted RBP20.61■□□□□ 0.89
CR381653.1-201ENST00000622961 PCDH11XQ9BZA7 1347 aa20.6■□□□□ 0.89
CR381653.1-201ENST00000622961 PCDH11YQ9BZA8 1340 aa20.6■□□□□ 0.89
CR381653.1-201ENST00000622961 CHD4Q14839 1912 aa20.6■□□□□ 0.89
CR381653.1-201ENST00000622961 TATP17735 454 aaPredicted RBP20.59■□□□□ 0.89
CR381653.1-201ENST00000622961 KCNQ4P56696 695 aa20.59■□□□□ 0.89
CR381653.1-201ENST00000622961 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
CR381653.1-201ENST00000622961 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.89
CR381653.1-201ENST00000622961 PNPLA7Q6ZV29 1317 aa20.58■□□□□ 0.89
CR381653.1-201ENST00000622961 HSPA5P11021 654 aaKnown RBP20.57■□□□□ 0.88
CR381653.1-201ENST00000622961 CYP27B1O15528 508 aa20.56■□□□□ 0.88
CR381653.1-201ENST00000622961 FHDC1Q9C0D6 1143 aaPredicted RBP20.56■□□□□ 0.88
CR381653.1-201ENST00000622961 MAP3K5Q99683 1374 aa20.56■□□□□ 0.88
CR381653.1-201ENST00000622961 WASHC2AQ641Q2 1341 aa20.55■□□□□ 0.88
CR381653.1-201ENST00000622961 EIF4G2P78344 907 aaKnown RBP eCLIP20.55■□□□□ 0.88
CR381653.1-201ENST00000622961 POLR3GLQ9BT43 218 aa20.55■□□□□ 0.88
CR381653.1-201ENST00000622961 PPM1GO15355 546 aaPredicted RBP20.53■□□□□ 0.88
CR381653.1-201ENST00000622961 POLKQ9UBT6 870 aa20.53■□□□□ 0.88
CR381653.1-201ENST00000622961 CCNL1Q9UK58 526 aaPredicted RBP20.53■□□□□ 0.88
CR381653.1-201ENST00000622961 PALLDQ8WX93 1383 aa20.52■□□□□ 0.88
CR381653.1-201ENST00000622961 CCER1Q8TC90 406 aaPredicted RBP20.52■□□□□ 0.88
CR381653.1-201ENST00000622961 SYT17Q9BSW7 474 aa20.52■□□□□ 0.88
CR381653.1-201ENST00000622961 ARXQ96QS3 562 aa20.51■□□□□ 0.87
CR381653.1-201ENST00000622961 EYA1Q99502 592 aa20.51■□□□□ 0.87
CR381653.1-201ENST00000622961 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
CR381653.1-201ENST00000622961 YY1P25490 414 aa20.5■□□□□ 0.87
CR381653.1-201ENST00000622961 ZNF831Q5JPB2 1677 aa20.5■□□□□ 0.87
CR381653.1-201ENST00000622961 COL5A3P25940 1745 aaPredicted RBP20.5■□□□□ 0.87
CR381653.1-201ENST00000622961 PLEKHG2Q9H7P9 1386 aa20.49■□□□□ 0.87
CR381653.1-201ENST00000622961 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
CR381653.1-201ENST00000622961 EIF4A2Q14240 407 aaKnown RBP20.48■□□□□ 0.87
CR381653.1-201ENST00000622961 TFCP2L1Q9NZI6 479 aa20.48■□□□□ 0.87
CR381653.1-201ENST00000622961 NKX1-1Q15270 411 aaPredicted RBP20.47■□□□□ 0.87
CR381653.1-201ENST00000622961 PANK3Q9H999 370 aa20.47■□□□□ 0.87
CR381653.1-201ENST00000622961 DCAF8L1A6NGE4 600 aa20.46■□□□□ 0.87
CR381653.1-201ENST00000622961 TNNT2P45379 298 aaPredicted RBP20.46■□□□□ 0.87
CR381653.1-201ENST00000622961 MPRIPQ6WCQ1 1025 aa20.46■□□□□ 0.87
CR381653.1-201ENST00000622961 IGSF1Q8N6C5 1336 aa20.46■□□□□ 0.87
CR381653.1-201ENST00000622961 SPG7Q9UQ90 795 aa20.45■□□□□ 0.86
CR381653.1-201ENST00000622961 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
CR381653.1-201ENST00000622961 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
CR381653.1-201ENST00000622961 COL23A1Q86Y22 540 aaPredicted RBP20.43■□□□□ 0.86
CR381653.1-201ENST00000622961 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
CR381653.1-201ENST00000622961 PHKG2P15735 406 aa20.42■□□□□ 0.86
CR381653.1-201ENST00000622961 PIGBQ92521 554 aa20.42■□□□□ 0.86
CR381653.1-201ENST00000622961 C4AP0C0L4 1744 aa20.41■□□□□ 0.86
CR381653.1-201ENST00000622961 POLD1P28340 1107 aa20.41■□□□□ 0.86
CR381653.1-201ENST00000622961 KDM6AO15550 1401 aaPredicted RBP20.41■□□□□ 0.86
CR381653.1-201ENST00000622961 KDRP35968 1356 aa20.4■□□□□ 0.86
CR381653.1-201ENST00000622961 AMIGO3Q86WK7 504 aa20.4■□□□□ 0.86
CR381653.1-201ENST00000622961 SMARCC1Q92922 1105 aaPredicted RBP20.4■□□□□ 0.86
CR381653.1-201ENST00000622961 TJP1Q07157 1748 aa20.39■□□□□ 0.86
CR381653.1-201ENST00000622961 UTRNP46939 3433 aa20.38■□□□□ 0.85
CR381653.1-201ENST00000622961 KIF7Q2M1P5 1343 aa20.38■□□□□ 0.85
CR381653.1-201ENST00000622961 MSL1Q68DK7 614 aa20.38■□□□□ 0.85
CR381653.1-201ENST00000622961 IFNL2Q8IZJ0 200 aa20.38■□□□□ 0.85
CR381653.1-201ENST00000622961 KLHL34Q8N239 644 aa20.38■□□□□ 0.85
CR381653.1-201ENST00000622961 NLGN2Q8NFZ4 835 aa20.37■□□□□ 0.85
CR381653.1-201ENST00000622961 TMOD3Q9NYL9 352 aa20.37■□□□□ 0.85
CR381653.1-201ENST00000622961 KIF13BQ9NQT8 1826 aa20.37■□□□□ 0.85
CR381653.1-201ENST00000622961 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
CR381653.1-201ENST00000622961 MYH14Q7Z406 1995 aaKnown RBP20.36■□□□□ 0.85
CR381653.1-201ENST00000622961 ADAMTS7Q9UKP4 1686 aa20.35■□□□□ 0.85
CR381653.1-201ENST00000622961 LOC102724428A0A0B4J2F2 783 aa20.35■□□□□ 0.85
CR381653.1-201ENST00000622961 SIK1P57059 783 aa20.35■□□□□ 0.85
CR381653.1-201ENST00000622961 MORC1Q86VD1 984 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms