RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 CPDO75976 1380 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 IL16Q14005 1332 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 TOM1O60784 492 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
CBWD3-219ENST00000622817 CABLES1Q8TDN4 633 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 CREBZFQ9NS37 354 aa9.13□□□□□ -0.95
CBWD3-219ENST00000622817 ABCC6O95255 1503 aa9.12□□□□□ -0.95
CBWD3-219ENST00000622817 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
CBWD3-219ENST00000622817 LRRC59Q96AG4 307 aaKnown RBP9.12□□□□□ -0.95
CBWD3-219ENST00000622817 FARP1Q9Y4F1 1045 aaPredicted RBP9.12□□□□□ -0.95
CBWD3-219ENST00000622817 ROBO1Q9Y6N7 1651 aa9.12□□□□□ -0.95
CBWD3-219ENST00000622817 CRYBG1Q9Y4K1 1723 aa9.11□□□□□ -0.95
CBWD3-219ENST00000622817 HAP1P54257 671 aaPredicted RBP9.11□□□□□ -0.95
CBWD3-219ENST00000622817 RNF123Q5XPI4 1314 aa9.11□□□□□ -0.95
CBWD3-219ENST00000622817 AHDC1Q5TGY3 1603 aaPredicted RBP9.11□□□□□ -0.95
CBWD3-219ENST00000622817 NBPF6Q5VWK0 638 aa9.11□□□□□ -0.95
CBWD3-219ENST00000622817 GAS2L2Q8NHY3 880 aa9.11□□□□□ -0.95
CBWD3-219ENST00000622817 NBPF4Q96M43 638 aa9.11□□□□□ -0.95
CBWD3-219ENST00000622817 AXIN2Q9Y2T1 843 aa9.11□□□□□ -0.95
CBWD3-219ENST00000622817 KIAA0232Q92628 1395 aa9.1□□□□□ -0.95
CBWD3-219ENST00000622817 ERBB3P21860 1342 aa9.1□□□□□ -0.95
CBWD3-219ENST00000622817 PRDM11Q9NQV5 511 aa9.09□□□□□ -0.95
CBWD3-219ENST00000622817 NCAPD2Q15021 1401 aa9.09□□□□□ -0.95
CBWD3-219ENST00000622817 COL18A1P39060 1754 aa9.09□□□□□ -0.96
CBWD3-219ENST00000622817 CHRNA2Q15822 529 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
CBWD3-219ENST00000622817 ERICH6BQ5W0A0 696 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 USHBP1Q8N6Y0 703 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 UBAP1LF5GYI3 381 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 HTATSF1O43719 755 aaKnown RBP9.08□□□□□ -0.96
CBWD3-219ENST00000622817 GNAI1P63096 354 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 IFT57Q9NWB7 429 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 FANCIQ9NVI1 1328 aa9.08□□□□□ -0.96
CBWD3-219ENST00000622817 CT47B1P0C2W7 299 aaPredicted RBP9.07□□□□□ -0.96
CBWD3-219ENST00000622817 CSB-PGBD3P0DP91 1061 aa9.07□□□□□ -0.96
CBWD3-219ENST00000622817 RRP1P56182 461 aaKnown RBP9.07□□□□□ -0.96
CBWD3-219ENST00000622817 PIP4K2BP78356 416 aa9.07□□□□□ -0.96
CBWD3-219ENST00000622817 RTF1Q92541 710 aaKnown RBP9.07□□□□□ -0.96
CBWD3-219ENST00000622817 NLRP2Q9NX02 1062 aa9.07□□□□□ -0.96
CBWD3-219ENST00000622817 DLG5Q8TDM6 1919 aa9.07□□□□□ -0.96
CBWD3-219ENST00000622817 AMOTQ4VCS5 1084 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 PLEKHO1Q53GL0 409 aaPredicted RBP9.06□□□□□ -0.96
CBWD3-219ENST00000622817 THUMPD2Q9BTF0 503 aaKnown RBP9.06□□□□□ -0.96
CBWD3-219ENST00000622817 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 ABCA3Q99758 1704 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 RGPD5Q99666 1765 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 GNAT3A8MTJ3 354 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 ZNF853P0CG23 659 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 TSR2Q969E8 191 aaKnown RBP9.06□□□□□ -0.96
CBWD3-219ENST00000622817 CFAP44Q96MT7 982 aa9.06□□□□□ -0.96
CBWD3-219ENST00000622817 COL22A1Q8NFW1 1626 aaPredicted RBP9.05□□□□□ -0.96
CBWD3-219ENST00000622817 LMO7Q8WWI1 1683 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 FAM208AQ9UK61 1670 aaKnown RBP9.05□□□□□ -0.96
CBWD3-219ENST00000622817 PHLPP1O60346 1717 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 RGPD2P0DJD1 1756 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 IRX6P78412 446 aaPredicted RBP9.05□□□□□ -0.96
CBWD3-219ENST00000622817 DCTN1Q14203 1278 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 MCM10Q7L590 875 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.05□□□□□ -0.96
CBWD3-219ENST00000622817 CERKQ8TCT0 537 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 LAS1LQ9Y4W2 734 aaKnown RBP9.05□□□□□ -0.96
CBWD3-219ENST00000622817 MAP3K5Q99683 1374 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
CBWD3-219ENST00000622817 EXOSC9Q06265 439 aaKnown RBP9.04□□□□□ -0.96
CBWD3-219ENST00000622817 RAPGEF4Q8WZA2 1011 aa9.04□□□□□ -0.96
CBWD3-219ENST00000622817 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
CBWD3-219ENST00000622817 COL16A1Q07092 1604 aaPredicted RBP9.04□□□□□ -0.96
CBWD3-219ENST00000622817 TATP17735 454 aaPredicted RBP9.04□□□□□ -0.96
CBWD3-219ENST00000622817 ZNF530Q6P9A1 599 aaPredicted RBP9.04□□□□□ -0.96
CBWD3-219ENST00000622817 MBIPQ9NS73 344 aa9.04□□□□□ -0.96
CBWD3-219ENST00000622817 CHL1O00533 1208 aa9.03□□□□□ -0.96
CBWD3-219ENST00000622817 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
CBWD3-219ENST00000622817 RARSP54136 660 aaKnown RBP9.03□□□□□ -0.96
CBWD3-219ENST00000622817 EVA1CP58658 441 aa9.03□□□□□ -0.96
CBWD3-219ENST00000622817 ZNF428Q96B54 188 aa9.03□□□□□ -0.96
CBWD3-219ENST00000622817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.03□□□□□ -0.96
CBWD3-219ENST00000622817 CRB1P82279 1406 aa9.03□□□□□ -0.96
CBWD3-219ENST00000622817 COL5A2P05997 1499 aaPredicted RBP9.03□□□□□ -0.96
CBWD3-219ENST00000622817 AKAP4Q5JQC9 854 aa9.02□□□□□ -0.96
CBWD3-219ENST00000622817 C1orf141Q5JVX7 400 aa9.02□□□□□ -0.96
CBWD3-219ENST00000622817 TOM1L2Q6ZVM7 507 aa9.02□□□□□ -0.96
CBWD3-219ENST00000622817 BCAR3O75815 825 aa9.02□□□□□ -0.97
CBWD3-219ENST00000622817 CD44P16070 742 aaKnown RBP9.02□□□□□ -0.97
CBWD3-219ENST00000622817 CARD10Q9BWT7 1032 aa9.02□□□□□ -0.97
CBWD3-219ENST00000622817 BABAM1Q9NWV8 329 aa9.02□□□□□ -0.97
CBWD3-219ENST00000622817 SPG7Q9UQ90 795 aa9.02□□□□□ -0.97
CBWD3-219ENST00000622817 PLIN1O60240 522 aa9.01□□□□□ -0.97
CBWD3-219ENST00000622817 IL17REQ8NFR9 667 aa9.01□□□□□ -0.97
CBWD3-219ENST00000622817 STRN4Q9NRL3 753 aa9.01□□□□□ -0.97
CBWD3-219ENST00000622817 PPP4R2Q9NY27 417 aa9.01□□□□□ -0.97
CBWD3-219ENST00000622817 COL14A1Q05707 1796 aaKnown RBP9.01□□□□□ -0.97
CBWD3-219ENST00000622817 CEMIPQ8WUJ3 1361 aa9□□□□□ -0.97
CBWD3-219ENST00000622817 TAF7Q15545 349 aaPredicted RBP9□□□□□ -0.97
CBWD3-219ENST00000622817 BTG4Q9NY30 223 aa9□□□□□ -0.97
CBWD3-219ENST00000622817 VAMP4O75379 141 aa9□□□□□ -0.97
CBWD3-219ENST00000622817 CANXP27824 592 aaKnown RBP9□□□□□ -0.97
CBWD3-219ENST00000622817 ALDH1L2Q3SY69 923 aa9□□□□□ -0.97
CBWD3-219ENST00000622817 TSPYL4Q9UJ04 414 aa9□□□□□ -0.97
CBWD3-219ENST00000622817 LRRC37A3O60309 1634 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms