RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 TXNRD1Q16881 649 aa14.08□□□□□ -0.16
PCDHGC3-207ENST00000622656 PANK3Q9H999 370 aa14.08□□□□□ -0.16
PCDHGC3-207ENST00000622656 NBPF14Q5TI25 921 aa14.07□□□□□ -0.16
PCDHGC3-207ENST00000622656 PAPPAQ13219 1627 aa14.07□□□□□ -0.16
PCDHGC3-207ENST00000622656 PPM1GO15355 546 aaPredicted RBP14.06□□□□□ -0.16
PCDHGC3-207ENST00000622656 TNNT2P45379 298 aaPredicted RBP14.06□□□□□ -0.16
PCDHGC3-207ENST00000622656 ZCRB1Q8TBF4 217 aaKnown RBP14.06□□□□□ -0.16
PCDHGC3-207ENST00000622656 POLKQ9UBT6 870 aa14.06□□□□□ -0.16
PCDHGC3-207ENST00000622656 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
PCDHGC3-207ENST00000622656 TOGARAM1Q9Y4F4 1720 aa14.05□□□□□ -0.16
PCDHGC3-207ENST00000622656 NSD2O96028 1365 aa14.05□□□□□ -0.16
PCDHGC3-207ENST00000622656 KIF24Q5T7B8 1368 aa14.05□□□□□ -0.16
PCDHGC3-207ENST00000622656 SMG6Q86US8 1419 aaKnown RBP14.05□□□□□ -0.16
PCDHGC3-207ENST00000622656 PKD1L3Q7Z443 1732 aa14.04□□□□□ -0.16
PCDHGC3-207ENST00000622656 TUBGCP6Q96RT7 1819 aa14.04□□□□□ -0.16
PCDHGC3-207ENST00000622656 LRRC4BQ9NT99 713 aa14.04□□□□□ -0.16
PCDHGC3-207ENST00000622656 NCAPD2Q15021 1401 aa14.04□□□□□ -0.16
PCDHGC3-207ENST00000622656 LY75O60449 1722 aa14.04□□□□□ -0.16
PCDHGC3-207ENST00000622656 ITGB4P16144 1822 aa14.04□□□□□ -0.16
PCDHGC3-207ENST00000622656 PRIM1P49642 420 aaKnown RBP14.03□□□□□ -0.16
PCDHGC3-207ENST00000622656 KCNQ4P56696 695 aa14.03□□□□□ -0.16
PCDHGC3-207ENST00000622656 KIF7Q2M1P5 1343 aa14.02□□□□□ -0.17
PCDHGC3-207ENST00000622656 WASHC2AQ641Q2 1341 aa14.02□□□□□ -0.17
PCDHGC3-207ENST00000622656 RAPGEF4Q8WZA2 1011 aa14.02□□□□□ -0.17
PCDHGC3-207ENST00000622656 EYA1Q99502 592 aa14.02□□□□□ -0.17
PCDHGC3-207ENST00000622656 CYP27B1O15528 508 aa14.01□□□□□ -0.17
PCDHGC3-207ENST00000622656 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-207ENST00000622656 SYTL4Q96C24 671 aaPredicted RBP14.01□□□□□ -0.17
PCDHGC3-207ENST00000622656 EIF4A2Q14240 407 aaKnown RBP14□□□□□ -0.17
PCDHGC3-207ENST00000622656 SLC15A2Q16348 729 aa14□□□□□ -0.17
PCDHGC3-207ENST00000622656 ZNF827Q17R98 1081 aa14□□□□□ -0.17
PCDHGC3-207ENST00000622656 ZBTB7AO95365 584 aa13.99□□□□□ -0.17
PCDHGC3-207ENST00000622656 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
PCDHGC3-207ENST00000622656 SPON1Q9HCB6 807 aa13.98□□□□□ -0.17
PCDHGC3-207ENST00000622656 TAF1LQ8IZX4 1826 aa13.97□□□□□ -0.17
PCDHGC3-207ENST00000622656 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
PCDHGC3-207ENST00000622656 QSER1Q2KHR3 1735 aa13.97□□□□□ -0.17
PCDHGC3-207ENST00000622656 PCDH11XQ9BZA7 1347 aa13.96□□□□□ -0.17
PCDHGC3-207ENST00000622656 PCDH11YQ9BZA8 1340 aa13.96□□□□□ -0.17
PCDHGC3-207ENST00000622656 AMER1Q5JTC6 1135 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-207ENST00000622656 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
PCDHGC3-207ENST00000622656 PTGER2P43116 358 aa13.95□□□□□ -0.18
PCDHGC3-207ENST00000622656 MORC1Q86VD1 984 aa13.95□□□□□ -0.18
PCDHGC3-207ENST00000622656 PER1O15534 1290 aaPredicted RBP13.94□□□□□ -0.18
PCDHGC3-207ENST00000622656 KNSTRNQ9Y448 316 aa13.94□□□□□ -0.18
PCDHGC3-207ENST00000622656 C5P01031 1676 aa13.94□□□□□ -0.18
PCDHGC3-207ENST00000622656 IGSF1Q8N6C5 1336 aa13.93□□□□□ -0.18
PCDHGC3-207ENST00000622656 MPRIPQ6WCQ1 1025 aa13.93□□□□□ -0.18
PCDHGC3-207ENST00000622656 SGIP1Q9BQI5 828 aa13.93□□□□□ -0.18
PCDHGC3-207ENST00000622656 COL24A1Q17RW2 1714 aa13.93□□□□□ -0.18
PCDHGC3-207ENST00000622656 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
PCDHGC3-207ENST00000622656 SLC27A3Q5K4L6 730 aa13.92□□□□□ -0.18
PCDHGC3-207ENST00000622656 AEBP1Q8IUX7 1158 aa13.92□□□□□ -0.18
PCDHGC3-207ENST00000622656 PNPLA7Q6ZV29 1317 aa13.91□□□□□ -0.18
PCDHGC3-207ENST00000622656 PIGBQ92521 554 aa13.91□□□□□ -0.18
PCDHGC3-207ENST00000622656 PPP1R1BQ9UD71 204 aaPredicted RBP13.91□□□□□ -0.18
PCDHGC3-207ENST00000622656 CCNL1Q9UK58 526 aaPredicted RBP13.91□□□□□ -0.18
PCDHGC3-207ENST00000622656 SPG7Q9UQ90 795 aa13.91□□□□□ -0.18
PCDHGC3-207ENST00000622656 PHKG2P15735 406 aa13.9□□□□□ -0.18
PCDHGC3-207ENST00000622656 CNGB1Q14028 1251 aaPredicted RBP13.9□□□□□ -0.18
PCDHGC3-207ENST00000622656 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 IL13P35225 146 aa13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 CC2D1BQ5T0F9 858 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 SMIM5Q71RC9 77 aa13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 MTFR1LQ9H019 292 aa13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 VIRMAQ69YN4 1812 aaKnown RBP13.89□□□□□ -0.19
PCDHGC3-207ENST00000622656 C4BP0C0L5 1744 aa13.88□□□□□ -0.19
PCDHGC3-207ENST00000622656 AMIGO3Q86WK7 504 aa13.88□□□□□ -0.19
PCDHGC3-207ENST00000622656 UBR3Q6ZT12 1888 aa13.88□□□□□ -0.19
PCDHGC3-207ENST00000622656 MTHFSP49914 203 aa13.87□□□□□ -0.19
PCDHGC3-207ENST00000622656 IFNL2Q8IZJ0 200 aa13.87□□□□□ -0.19
PCDHGC3-207ENST00000622656 TFCP2L1Q9NZI6 479 aa13.87□□□□□ -0.19
PCDHGC3-207ENST00000622656 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
PCDHGC3-207ENST00000622656 SULT6B1Q6IMI4 303 aa13.86□□□□□ -0.19
PCDHGC3-207ENST00000622656 COL23A1Q86Y22 540 aaPredicted RBP13.86□□□□□ -0.19
PCDHGC3-207ENST00000622656 FHDC1Q9C0D6 1143 aaPredicted RBP13.86□□□□□ -0.19
PCDHGC3-207ENST00000622656 KDM6AO15550 1401 aaPredicted RBP13.86□□□□□ -0.19
PCDHGC3-207ENST00000622656 SCN11AQ9UI33 1791 aa13.85□□□□□ -0.19
PCDHGC3-207ENST00000622656 KDRP35968 1356 aa13.84□□□□□ -0.19
PCDHGC3-207ENST00000622656 ZNF530Q6P9A1 599 aaPredicted RBP13.84□□□□□ -0.19
PCDHGC3-207ENST00000622656 SYT17Q9BSW7 474 aa13.84□□□□□ -0.19
PCDHGC3-207ENST00000622656 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
PCDHGC3-207ENST00000622656 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
PCDHGC3-207ENST00000622656 COL3A1P02461 1466 aaPredicted RBP13.84□□□□□ -0.19
PCDHGC3-207ENST00000622656 HMOX1P09601 288 aa13.83□□□□□ -0.2
PCDHGC3-207ENST00000622656 ITPK1Q13572 414 aa13.83□□□□□ -0.2
PCDHGC3-207ENST00000622656 PLEKHO1Q53GL0 409 aaPredicted RBP13.83□□□□□ -0.2
PCDHGC3-207ENST00000622656 LINC00116Q8NCU8 138 aa13.83□□□□□ -0.2
PCDHGC3-207ENST00000622656 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
PCDHGC3-207ENST00000622656 ARXQ96QS3 562 aa13.83□□□□□ -0.2
PCDHGC3-207ENST00000622656 UTRNP46939 3433 aa13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 MYH14Q7Z406 1995 aaKnown RBP13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 LOC102724428A0A0B4J2F2 783 aa13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 SIK1P57059 783 aa13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 MSL1Q68DK7 614 aa13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 SMARCC1Q92922 1105 aaPredicted RBP13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 PLEKHG2Q9H7P9 1386 aa13.82□□□□□ -0.2
PCDHGC3-207ENST00000622656 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
PCDHGC3-207ENST00000622656 MSH5O43196 834 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms