RNA–Protein interactions for RNA: ENST00000622449.2

MADCAM1-209, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

TSL 2

Gene MADCAM1, Length 533 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-209ENST00000622449 LRRC37A3O60309 1634 aa30.44■■■□□ 2.46
MADCAM1-209ENST00000622449 SPG7Q9UQ90 795 aa30.43■■■□□ 2.46
MADCAM1-209ENST00000622449 KDRP35968 1356 aa30.42■■■□□ 2.46
MADCAM1-209ENST00000622449 U2SURPO15042 1029 aaKnown RBP30.42■■■□□ 2.46
MADCAM1-209ENST00000622449 SULT6B1Q6IMI4 303 aa30.42■■■□□ 2.46
MADCAM1-209ENST00000622449 AMOTQ4VCS5 1084 aa30.41■■■□□ 2.46
MADCAM1-209ENST00000622449 CCDC125Q86Z20 511 aa30.41■■■□□ 2.46
MADCAM1-209ENST00000622449 RGPD1P0DJD0 1748 aa30.4■■■□□ 2.46
MADCAM1-209ENST00000622449 MEGF6O75095 1541 aa30.4■■■□□ 2.46
MADCAM1-209ENST00000622449 PCDH11XQ9BZA7 1347 aa30.39■■■□□ 2.46
MADCAM1-209ENST00000622449 PCDH11YQ9BZA8 1340 aa30.39■■■□□ 2.46
MADCAM1-209ENST00000622449 PLEKHO1Q53GL0 409 aaPredicted RBP30.38■■■□□ 2.45
MADCAM1-209ENST00000622449 PNNQ9H307 717 aaKnown RBP30.38■■■□□ 2.45
MADCAM1-209ENST00000622449 BCL9O00512 1426 aa30.38■■■□□ 2.45
MADCAM1-209ENST00000622449 MARCH10Q8NA82 808 aaPredicted RBP30.35■■■□□ 2.45
MADCAM1-209ENST00000622449 U2AF1L5P0DN76 240 aaPredicted RBP30.34■■■□□ 2.45
MADCAM1-209ENST00000622449 U2AF1Q01081 240 aaKnown RBP eCLIP30.34■■■□□ 2.45
MADCAM1-209ENST00000622449 DDX54Q8TDD1 881 aaKnown RBP30.34■■■□□ 2.45
MADCAM1-209ENST00000622449 FCHSD2O94868 740 aa30.33■■■□□ 2.45
MADCAM1-209ENST00000622449 NEFMP07197 916 aa30.32■■■□□ 2.44
MADCAM1-209ENST00000622449 SF3B2Q13435 895 aaKnown RBP30.32■■■□□ 2.44
MADCAM1-209ENST00000622449 HMOX1P09601 288 aa30.31■■■□□ 2.44
MADCAM1-209ENST00000622449 AEBP1Q8IUX7 1158 aa30.31■■■□□ 2.44
MADCAM1-209ENST00000622449 PKD1L3Q7Z443 1732 aa30.3■■■□□ 2.44
MADCAM1-209ENST00000622449 HSP90AB1P08238 724 aaKnown RBP30.3■■■□□ 2.44
MADCAM1-209ENST00000622449 IFNL2Q8IZJ0 200 aa30.29■■■□□ 2.44
MADCAM1-209ENST00000622449 SRCAPQ6ZRS2 3230 aa30.28■■■□□ 2.44
MADCAM1-209ENST00000622449 WDR43Q15061 677 aaKnown RBP eCLIP30.27■■■□□ 2.44
MADCAM1-209ENST00000622449 C1orf141Q5JVX7 400 aa30.26■■■□□ 2.43
MADCAM1-209ENST00000622449 FAM182BQ5T319 152 aa30.26■■■□□ 2.43
MADCAM1-209ENST00000622449 DEFB132Q7Z7B7 95 aa30.25■■■□□ 2.43
MADCAM1-209ENST00000622449 NKX1-1Q15270 411 aaPredicted RBP30.24■■■□□ 2.43
MADCAM1-209ENST00000622449 ZNF530Q6P9A1 599 aaPredicted RBP30.23■■■□□ 2.43
MADCAM1-209ENST00000622449 GAS2L2Q8NHY3 880 aa30.23■■■□□ 2.43
MADCAM1-209ENST00000622449 RSPH6AQ9H0K4 717 aa30.23■■■□□ 2.43
MADCAM1-209ENST00000622449 CYP27B1O15528 508 aa30.22■■■□□ 2.43
MADCAM1-209ENST00000622449 PHKG2P15735 406 aa30.22■■■□□ 2.43
MADCAM1-209ENST00000622449 BCL11BQ9C0K0 894 aaPredicted RBP30.22■■■□□ 2.43
MADCAM1-209ENST00000622449 PRKAR2BP31323 418 aa30.21■■■□□ 2.43
MADCAM1-209ENST00000622449 SHANK3Q9BYB0 1731 aa30.21■■■□□ 2.43
MADCAM1-209ENST00000622449 AKAP4Q5JQC9 854 aa30.2■■■□□ 2.43
MADCAM1-209ENST00000622449 TRIM37O94972 964 aa30.19■■■□□ 2.42
MADCAM1-209ENST00000622449 DIEXFQ68CQ4 756 aaKnown RBP30.19■■■□□ 2.42
MADCAM1-209ENST00000622449 DCAF5Q96JK2 942 aa30.19■■■□□ 2.42
MADCAM1-209ENST00000622449 BAG6P46379 1132 aa30.17■■■□□ 2.42
MADCAM1-209ENST00000622449 MAPK8IP3Q9UPT6 1336 aa30.16■■■□□ 2.42
MADCAM1-209ENST00000622449 MRS2Q9HD23 443 aa30.15■■■□□ 2.42
MADCAM1-209ENST00000622449 SBF2Q86WG5 1849 aa30.14■■■□□ 2.42
MADCAM1-209ENST00000622449 MTHFSDQ2M296 383 aaKnown RBP30.13■■■□□ 2.41
MADCAM1-209ENST00000622449 NHSQ6T4R5 1651 aa30.12■■■□□ 2.41
MADCAM1-209ENST00000622449 ERVV-2B6SEH9 535 aa30.12■■■□□ 2.41
MADCAM1-209ENST00000622449 APBA3O96018 575 aa30.12■■■□□ 2.41
MADCAM1-209ENST00000622449 ACSBG1Q96GR2 724 aa30.12■■■□□ 2.41
MADCAM1-209ENST00000622449 HMGB2P26583 209 aaKnown RBP30.11■■■□□ 2.41
MADCAM1-209ENST00000622449 SYTL4Q96C24 671 aaPredicted RBP30.11■■■□□ 2.41
MADCAM1-209ENST00000622449 GNAT3A8MTJ3 354 aa30.1■■■□□ 2.41
MADCAM1-209ENST00000622449 PRIM1P49642 420 aaKnown RBP30.1■■■□□ 2.41
MADCAM1-209ENST00000622449 KAT6BQ8WYB5 2073 aa30.1■■■□□ 2.41
MADCAM1-209ENST00000622449 PLSCR1O15162 318 aa30.09■■■□□ 2.41
MADCAM1-209ENST00000622449 PLEKHF1Q96S99 279 aa30.09■■■□□ 2.41
MADCAM1-209ENST00000622449 HTATSF1O43719 755 aaKnown RBP30.08■■■□□ 2.41
MADCAM1-209ENST00000622449 PHACTR3Q96KR7 559 aa30.08■■■□□ 2.41
MADCAM1-209ENST00000622449 MAP3K5Q99683 1374 aa30.07■■■□□ 2.4
MADCAM1-209ENST00000622449 RTF1Q92541 710 aaKnown RBP30.07■■■□□ 2.4
MADCAM1-209ENST00000622449 RUNDC1Q96C34 613 aa30.07■■■□□ 2.4
MADCAM1-209ENST00000622449 TMOD3Q9NYL9 352 aa30.07■■■□□ 2.4
MADCAM1-209ENST00000622449 ADAMTS8Q9UP79 889 aa30.07■■■□□ 2.4
MADCAM1-209ENST00000622449 DOT1LQ8TEK3 1739 aa30.06■■■□□ 2.4
MADCAM1-209ENST00000622449 TNS1Q9HBL0 1735 aaKnown RBP30.06■■■□□ 2.4
MADCAM1-209ENST00000622449 CCER2I3L3R5 266 aa30.06■■■□□ 2.4
MADCAM1-209ENST00000622449 KCNQ2O43526 872 aa30.06■■■□□ 2.4
MADCAM1-209ENST00000622449 CABP4P57796 275 aa30.04■■■□□ 2.4
MADCAM1-209ENST00000622449 MPRIPQ6WCQ1 1025 aa30.04■■■□□ 2.4
MADCAM1-209ENST00000622449 PNISRQ8TF01 805 aaKnown RBP30.04■■■□□ 2.4
MADCAM1-209ENST00000622449 SMARCC1Q92922 1105 aaPredicted RBP30.04■■■□□ 2.4
MADCAM1-209ENST00000622449 NFE2L2Q16236 605 aa30.02■■■□□ 2.4
MADCAM1-209ENST00000622449 RNMTO43148 476 aaKnown RBP30.01■■■□□ 2.39
MADCAM1-209ENST00000622449 LMOD3Q0VAK6 560 aa30.01■■■□□ 2.39
MADCAM1-209ENST00000622449 RGPD3A6NKT7 1758 aaPredicted RBP30■■■□□ 2.39
MADCAM1-209ENST00000622449 RGPD4Q7Z3J3 1758 aa30■■■□□ 2.39
MADCAM1-209ENST00000622449 LRP5O75197 1615 aa30■■■□□ 2.39
MADCAM1-209ENST00000622449 KDM6AO15550 1401 aaPredicted RBP29.99■■■□□ 2.39
MADCAM1-209ENST00000622449 CCDC184Q52MB2 194 aa29.99■■■□□ 2.39
MADCAM1-209ENST00000622449 EN1Q05925 392 aaPredicted RBP29.98■■■□□ 2.39
MADCAM1-209ENST00000622449 BTAF1O14981 1849 aa29.98■■■□□ 2.39
MADCAM1-209ENST00000622449 SCN11AQ9UI33 1791 aa29.98■■■□□ 2.39
MADCAM1-209ENST00000622449 PSDA5PKW4 1024 aaPredicted RBP29.97■■■□□ 2.39
MADCAM1-209ENST00000622449 TEFQ10587 303 aa29.97■■■□□ 2.39
MADCAM1-209ENST00000622449 PIGBQ92521 554 aa29.97■■■□□ 2.39
MADCAM1-209ENST00000622449 CAMKK2Q96RR4 588 aa29.97■■■□□ 2.39
MADCAM1-209ENST00000622449 SLC52A2Q9HAB3 445 aa29.97■■■□□ 2.39
MADCAM1-209ENST00000622449 ITGB4P16144 1822 aa29.96■■■□□ 2.39
MADCAM1-209ENST00000622449 TOGARAM1Q9Y4F4 1720 aa29.96■■■□□ 2.39
MADCAM1-209ENST00000622449 SLC27A3Q5K4L6 730 aa29.95■■■□□ 2.39
MADCAM1-209ENST00000622449 ADAMTS7Q9UKP4 1686 aa29.95■■■□□ 2.38
MADCAM1-209ENST00000622449 PTF1AQ7RTS3 328 aa29.94■■■□□ 2.38
MADCAM1-209ENST00000622449 NFATC2IPQ8NCF5 419 aa29.94■■■□□ 2.38
MADCAM1-209ENST00000622449 LGR6Q9HBX8 967 aa29.94■■■□□ 2.38
MADCAM1-209ENST00000622449 TMPOP42166 694 aaKnown RBP29.93■■■□□ 2.38
MADCAM1-209ENST00000622449 RIPK4P57078 832 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms