RNA–Protein interactions for RNA: ENST00000622433.4

MECP2-213, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-213ENST00000622433 PKD1L3Q7Z443 1732 aa18.14■□□□□ 0.49
MECP2-213ENST00000622433 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
MECP2-213ENST00000622433 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
MECP2-213ENST00000622433 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
MECP2-213ENST00000622433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
MECP2-213ENST00000622433 NUDCQ9Y266 331 aa18.12■□□□□ 0.49
MECP2-213ENST00000622433 AEBP1Q8IUX7 1158 aa18.11■□□□□ 0.49
MECP2-213ENST00000622433 FAM182BQ5T319 152 aa18.1■□□□□ 0.49
MECP2-213ENST00000622433 UPF1Q92900 1129 aaKnown RBP eCLIP18.1■□□□□ 0.495e-7■■□□□ 11.4
MECP2-213ENST00000622433 PCDH11XQ9BZA7 1347 aa18.09■□□□□ 0.49
MECP2-213ENST00000622433 PCDH11YQ9BZA8 1340 aa18.09■□□□□ 0.49
MECP2-213ENST00000622433 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
MECP2-213ENST00000622433 CCDC125Q86Z20 511 aa18.09■□□□□ 0.49
MECP2-213ENST00000622433 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
MECP2-213ENST00000622433 ANP32CO43423 234 aa18.08■□□□□ 0.48
MECP2-213ENST00000622433 HMOX1P09601 288 aa18.07■□□□□ 0.48
MECP2-213ENST00000622433 AMOTQ4VCS5 1084 aa18.07■□□□□ 0.48
MECP2-213ENST00000622433 DDX54Q8TDD1 881 aaKnown RBP18.07■□□□□ 0.48
MECP2-213ENST00000622433 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
MECP2-213ENST00000622433 CYP27B1O15528 508 aa18.05■□□□□ 0.48
MECP2-213ENST00000622433 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
MECP2-213ENST00000622433 U2AF1L5P0DN76 240 aaPredicted RBP18.04■□□□□ 0.48
MECP2-213ENST00000622433 U2AF1Q01081 240 aaKnown RBP eCLIP18.04■□□□□ 0.48
MECP2-213ENST00000622433 RSPH6AQ9H0K4 717 aa18.04■□□□□ 0.48
MECP2-213ENST00000622433 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
MECP2-213ENST00000622433 NHSQ6T4R5 1651 aa18.03■□□□□ 0.48
MECP2-213ENST00000622433 FCHSD2O94868 740 aa18.03■□□□□ 0.48
MECP2-213ENST00000622433 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
MECP2-213ENST00000622433 IFNL2Q8IZJ0 200 aa18.03■□□□□ 0.48
MECP2-213ENST00000622433 TRIM37O94972 964 aa18.02■□□□□ 0.48
MECP2-213ENST00000622433 PHKG2P15735 406 aa18.02■□□□□ 0.48
MECP2-213ENST00000622433 SF3B2Q13435 895 aaKnown RBP18.01■□□□□ 0.47
MECP2-213ENST00000622433 ZNF530Q6P9A1 599 aaPredicted RBP18.01■□□□□ 0.47
MECP2-213ENST00000622433 BCL11BQ9C0K0 894 aaPredicted RBP18.01■□□□□ 0.47
MECP2-213ENST00000622433 EP400Q96L91 3159 aa18■□□□□ 0.47
MECP2-213ENST00000622433 PRKAR2BP31323 418 aa18■□□□□ 0.47
MECP2-213ENST00000622433 DOT1LQ8TEK3 1739 aa18■□□□□ 0.47
MECP2-213ENST00000622433 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
MECP2-213ENST00000622433 MTHFSDQ2M296 383 aaKnown RBP17.98■□□□□ 0.47
MECP2-213ENST00000622433 ACSBG1Q96GR2 724 aa17.98■□□□□ 0.47
MECP2-213ENST00000622433 TOGARAM1Q9Y4F4 1720 aa17.98■□□□□ 0.47
MECP2-213ENST00000622433 KCNQ2O43526 872 aa17.97■□□□□ 0.47
MECP2-213ENST00000622433 BAG6P46379 1132 aa17.97■□□□□ 0.47
MECP2-213ENST00000622433 AKAP4Q5JQC9 854 aa17.97■□□□□ 0.47
MECP2-213ENST00000622433 C1orf141Q5JVX7 400 aa17.97■□□□□ 0.47
MECP2-213ENST00000622433 GAS2L2Q8NHY3 880 aa17.97■□□□□ 0.47
MECP2-213ENST00000622433 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
MECP2-213ENST00000622433 WDR43Q15061 677 aaKnown RBP eCLIP17.96■□□□□ 0.47
MECP2-213ENST00000622433 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
MECP2-213ENST00000622433 RGPD3A6NKT7 1758 aaPredicted RBP17.95■□□□□ 0.46
MECP2-213ENST00000622433 RGPD4Q7Z3J3 1758 aa17.95■□□□□ 0.46
MECP2-213ENST00000622433 APBA3O96018 575 aa17.95■□□□□ 0.46
MECP2-213ENST00000622433 PRIM1P49642 420 aaKnown RBP17.95■□□□□ 0.46
MECP2-213ENST00000622433 PTF1AQ7RTS3 328 aa17.95■□□□□ 0.46
MECP2-213ENST00000622433 PHACTR3Q96KR7 559 aa17.95■□□□□ 0.46
MECP2-213ENST00000622433 PLEKHF1Q96S99 279 aa17.95■□□□□ 0.46
MECP2-213ENST00000622433 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
MECP2-213ENST00000622433 CCDC184Q52MB2 194 aa17.94■□□□□ 0.46
MECP2-213ENST00000622433 BTAF1O14981 1849 aa17.93■□□□□ 0.46
MECP2-213ENST00000622433 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
MECP2-213ENST00000622433 ERVV-2B6SEH9 535 aa17.93■□□□□ 0.46
MECP2-213ENST00000622433 PLSCR1O15162 318 aa17.93■□□□□ 0.46
MECP2-213ENST00000622433 NEFMP07197 916 aa17.93■□□□□ 0.46
MECP2-213ENST00000622433 DEFB132Q7Z7B7 95 aa17.93■□□□□ 0.46
MECP2-213ENST00000622433 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
MECP2-213ENST00000622433 SYTL4Q96C24 671 aaPredicted RBP17.92■□□□□ 0.46
MECP2-213ENST00000622433 CAMKK2Q96RR4 588 aa17.92■□□□□ 0.46
MECP2-213ENST00000622433 MRS2Q9HD23 443 aa17.92■□□□□ 0.46
MECP2-213ENST00000622433 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
MECP2-213ENST00000622433 ITGB4P16144 1822 aa17.91■□□□□ 0.46
MECP2-213ENST00000622433 DIEXFQ68CQ4 756 aaKnown RBP17.91■□□□□ 0.46
MECP2-213ENST00000622433 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
MECP2-213ENST00000622433 ADAMTS8Q9UP79 889 aa17.91■□□□□ 0.46
MECP2-213ENST00000622433 MAPK8IP3Q9UPT6 1336 aa17.91■□□□□ 0.46
MECP2-213ENST00000622433 MRC1P22897 1456 aa17.9■□□□□ 0.46
MECP2-213ENST00000622433 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
MECP2-213ENST00000622433 EN1Q05925 392 aaPredicted RBP17.9■□□□□ 0.46
MECP2-213ENST00000622433 RNMTO43148 476 aaKnown RBP17.89■□□□□ 0.45
MECP2-213ENST00000622433 PNISRQ8TF01 805 aaKnown RBP17.89■□□□□ 0.45
MECP2-213ENST00000622433 TMOD3Q9NYL9 352 aa17.89■□□□□ 0.45
MECP2-213ENST00000622433 RREB1Q92766 1687 aa17.89■□□□□ 0.45
MECP2-213ENST00000622433 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
MECP2-213ENST00000622433 NFE2L2Q16236 605 aa17.88■□□□□ 0.45
MECP2-213ENST00000622433 PIGBQ92521 554 aa17.88■□□□□ 0.45
MECP2-213ENST00000622433 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
MECP2-213ENST00000622433 KAT6BQ8WYB5 2073 aa17.87■□□□□ 0.45
MECP2-213ENST00000622433 CABP4P57796 275 aa17.87■□□□□ 0.45
MECP2-213ENST00000622433 EZH2Q15910 746 aaKnown RBP17.87■□□□□ 0.45
MECP2-213ENST00000622433 LGR6Q9HBX8 967 aa17.87■□□□□ 0.45
MECP2-213ENST00000622433 CEMIPQ8WUJ3 1361 aa17.87■□□□□ 0.45
MECP2-213ENST00000622433 SMARCC1Q92922 1105 aaPredicted RBP17.86■□□□□ 0.45
MECP2-213ENST00000622433 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
MECP2-213ENST00000622433 CCER2I3L3R5 266 aa17.85■□□□□ 0.45
MECP2-213ENST00000622433 LY75O60449 1722 aa17.85■□□□□ 0.45
MECP2-213ENST00000622433 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
MECP2-213ENST00000622433 IL17REQ8NFR9 667 aa17.85■□□□□ 0.45
MECP2-213ENST00000622433 TXNRD1Q16881 649 aa17.84■□□□□ 0.45
MECP2-213ENST00000622433 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
MECP2-213ENST00000622433 RTF1Q92541 710 aaKnown RBP17.84■□□□□ 0.45
MECP2-213ENST00000622433 NUP188Q5SRE5 1749 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms