RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CCDC102BQ68D86 513 aa8.62□□□□□ -1.03
CPNE3-213ENST00000622183 TXNDC2Q86VQ3 553 aa8.62□□□□□ -1.03
CPNE3-213ENST00000622183 EHBP1Q8NDI1 1231 aa8.62□□□□□ -1.03
CPNE3-213ENST00000622183 TPCN2Q8NHX9 752 aa8.62□□□□□ -1.03
CPNE3-213ENST00000622183 RBM19Q9Y4C8 960 aaKnown RBP8.62□□□□□ -1.03
CPNE3-213ENST00000622183 MYCP01106 439 aaPredicted RBP8.61□□□□□ -1.03
CPNE3-213ENST00000622183 ATP2B4P23634 1241 aa8.61□□□□□ -1.03
CPNE3-213ENST00000622183 RAB15P59190 212 aa8.61□□□□□ -1.03
CPNE3-213ENST00000622183 PSME1Q06323 249 aa8.61□□□□□ -1.03
CPNE3-213ENST00000622183 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
CPNE3-213ENST00000622183 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
CPNE3-213ENST00000622183 CDK15Q96Q40 435 aa8.61□□□□□ -1.03
CPNE3-213ENST00000622183 ERVH48-1M5A8F1 160 aa8.6□□□□□ -1.03
CPNE3-213ENST00000622183 MPNDQ8N594 471 aa8.6□□□□□ -1.03
CPNE3-213ENST00000622183 CCER1Q8TC90 406 aaPredicted RBP8.6□□□□□ -1.03
CPNE3-213ENST00000622183 ARID4AP29374 1257 aaPredicted RBP8.59□□□□□ -1.03
CPNE3-213ENST00000622183 SFI1A8K8P3 1242 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 SCTRP47872 440 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 ERVK-9P63128 1117 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 LIAT1Q6ZQX7 453 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 NPM2Q86SE8 214 aaKnown RBP8.58□□□□□ -1.04
CPNE3-213ENST00000622183 RGS22Q8NE09 1264 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 TRIM52Q96A61 297 aa8.58□□□□□ -1.04
CPNE3-213ENST00000622183 M0R2N6 131 aa8.57□□□□□ -1.04
CPNE3-213ENST00000622183 GRM5P41594 1212 aa8.57□□□□□ -1.04
CPNE3-213ENST00000622183 DHX9Q08211 1270 aaKnown RBP8.57□□□□□ -1.04
CPNE3-213ENST00000622183 ARID5BQ14865 1188 aa8.57□□□□□ -1.04
CPNE3-213ENST00000622183 OCLNQ16625 522 aa8.57□□□□□ -1.04
CPNE3-213ENST00000622183 EMID1Q96A84 441 aaPredicted RBP8.57□□□□□ -1.04
CPNE3-213ENST00000622183 SIAH2O43255 324 aa8.56□□□□□ -1.04
CPNE3-213ENST00000622183 FSHRP23945 695 aa8.56□□□□□ -1.04
CPNE3-213ENST00000622183 IFFO2Q5TF58 517 aa8.56□□□□□ -1.04
CPNE3-213ENST00000622183 CC2D2BQ6DHV5 1058 aa8.56□□□□□ -1.04
CPNE3-213ENST00000622183 PRMT3O60678 531 aa8.55□□□□□ -1.04
CPNE3-213ENST00000622183 CCDC27Q2M243 656 aa8.55□□□□□ -1.04
CPNE3-213ENST00000622183 ESF1Q9H501 851 aaKnown RBP8.55□□□□□ -1.04
CPNE3-213ENST00000622183 TLL2Q9Y6L7 1015 aa8.55□□□□□ -1.04
CPNE3-213ENST00000622183 WNT7AO00755 349 aa8.54□□□□□ -1.04
CPNE3-213ENST00000622183 ADH1CP00326 375 aa8.54□□□□□ -1.04
CPNE3-213ENST00000622183 TAS1R3Q7RTX0 852 aa8.54□□□□□ -1.04
CPNE3-213ENST00000622183 OSBPL3Q9H4L5 887 aa8.54□□□□□ -1.04
CPNE3-213ENST00000622183 CXXC1Q9P0U4 656 aaPredicted RBP8.54□□□□□ -1.04
CPNE3-213ENST00000622183 MTMR7Q9Y216 660 aa8.54□□□□□ -1.04
CPNE3-213ENST00000622183 SLC19A1P41440 591 aa8.53□□□□□ -1.04
CPNE3-213ENST00000622183 NR5A1Q13285 461 aa8.53□□□□□ -1.04
CPNE3-213ENST00000622183 TSEN2Q8NCE0 465 aaKnown RBP8.53□□□□□ -1.04
CPNE3-213ENST00000622183 PRIMPOLQ96LW4 560 aa8.53□□□□□ -1.04
CPNE3-213ENST00000622183 CYLDQ9NQC7 956 aa8.53□□□□□ -1.04
CPNE3-213ENST00000622183 TMPRSS4Q9NRS4 437 aa8.53□□□□□ -1.04
CPNE3-213ENST00000622183 WASLO00401 505 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-213ENST00000622183 WEE1P30291 646 aa8.52□□□□□ -1.05
CPNE3-213ENST00000622183 RANGAP1P46060 587 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-213ENST00000622183 CCDC116Q8IYX3 515 aa8.52□□□□□ -1.05
CPNE3-213ENST00000622183 ZNF784Q8NCA9 323 aaPredicted RBP8.52□□□□□ -1.05
CPNE3-213ENST00000622183 HINFPQ9BQA5 517 aa8.52□□□□□ -1.05
CPNE3-213ENST00000622183 ZNF358Q9NW07 568 aa8.52□□□□□ -1.05
CPNE3-213ENST00000622183 TMEM229AB2RXF0 380 aa8.51□□□□□ -1.05
CPNE3-213ENST00000622183 LILRA1O75019 489 aa8.51□□□□□ -1.05
CPNE3-213ENST00000622183 SERPINB4P48594 390 aa8.51□□□□□ -1.05
CPNE3-213ENST00000622183 SCNN1DP51172 638 aa8.51□□□□□ -1.05
CPNE3-213ENST00000622183 PPP1R26Q5T8A7 1209 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-213ENST00000622183 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
CPNE3-213ENST00000622183 MRGPRX2Q96LB1 330 aa8.51□□□□□ -1.05
CPNE3-213ENST00000622183 SOWAHDA6NJG2 315 aa8.5□□□□□ -1.05
CPNE3-213ENST00000622183 SCNN1AP37088 669 aa8.5□□□□□ -1.05
CPNE3-213ENST00000622183 MYT1Q01538 1121 aa8.5□□□□□ -1.05
CPNE3-213ENST00000622183 BACH1O14867 736 aa8.49□□□□□ -1.05
CPNE3-213ENST00000622183 GDF10P55107 478 aa8.49□□□□□ -1.05
CPNE3-213ENST00000622183 SPRYD7Q5W111 196 aa8.49□□□□□ -1.05
CPNE3-213ENST00000622183 CYP2U1Q7Z449 544 aa8.49□□□□□ -1.05
CPNE3-213ENST00000622183 EGFL7Q9UHF1 273 aa8.49□□□□□ -1.05
CPNE3-213ENST00000622183 LGR5O75473 907 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 GNRH1P01148 92 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 INHAP05111 366 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 NR3C2P08235 984 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 MMRN1Q13201 1228 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 PGPEP1Q9NXJ5 209 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 EMILIN1Q9Y6C2 1016 aa8.48□□□□□ -1.05
CPNE3-213ENST00000622183 IGFBP4P22692 258 aa8.47□□□□□ -1.05
CPNE3-213ENST00000622183 SLC4A9Q96Q91 983 aa8.47□□□□□ -1.05
CPNE3-213ENST00000622183 ETNK1Q9HBU6 452 aa8.47□□□□□ -1.05
CPNE3-213ENST00000622183 STAU1O95793 577 aaKnown RBP8.46□□□□□ -1.06
CPNE3-213ENST00000622183 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
CPNE3-213ENST00000622183 EPHA4P54764 986 aa8.46□□□□□ -1.06
CPNE3-213ENST00000622183 FKBP5Q13451 457 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-213ENST00000622183 FOXD4L5Q5VV16 416 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-213ENST00000622183 FOXD4L4Q8WXT5 416 aaPredicted RBP8.46□□□□□ -1.06
CPNE3-213ENST00000622183 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
CPNE3-213ENST00000622183 ESCO1Q5FWF5 840 aa8.45□□□□□ -1.06
CPNE3-213ENST00000622183 ZNF697Q5TEC3 545 aa8.45□□□□□ -1.06
CPNE3-213ENST00000622183 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
CPNE3-213ENST00000622183 TNS4Q8IZW8 715 aa8.45□□□□□ -1.06
CPNE3-213ENST00000622183 COL26A1Q96A83 441 aa8.45□□□□□ -1.06
CPNE3-213ENST00000622183 FOXO3O43524 673 aa8.44□□□□□ -1.06
CPNE3-213ENST00000622183 ALDH1A1P00352 501 aa8.44□□□□□ -1.06
CPNE3-213ENST00000622183 GAS2L2Q8NHY3 880 aa8.44□□□□□ -1.06
CPNE3-213ENST00000622183 SCG3Q8WXD2 468 aaKnown RBP8.44□□□□□ -1.06
CPNE3-213ENST00000622183 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
CPNE3-213ENST00000622183 PKD2L1Q9P0L9 805 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms