RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 COL18A1P39060 1754 aa22.33■■□□□ 1.16
FAM3A-222ENST00000621967 USP35Q9P2H5 1018 aa22.33■■□□□ 1.16
FAM3A-222ENST00000621967 LRP6O75581 1613 aa22.33■■□□□ 1.16
FAM3A-222ENST00000621967 FAM83GA6ND36 823 aa22.32■■□□□ 1.16
FAM3A-222ENST00000621967 LTV1Q96GA3 475 aaPredicted RBP22.32■■□□□ 1.16
FAM3A-222ENST00000621967 PLEKHF1Q96S99 279 aa22.32■■□□□ 1.16
FAM3A-222ENST00000621967 LMO7Q8WWI1 1683 aa22.31■■□□□ 1.16
FAM3A-222ENST00000621967 AXIN2Q9Y2T1 843 aa22.31■■□□□ 1.16
FAM3A-222ENST00000621967 MAPK8IP3Q9UPT6 1336 aa22.31■■□□□ 1.16
FAM3A-222ENST00000621967 RGPD5Q99666 1765 aa22.31■■□□□ 1.16
FAM3A-222ENST00000621967 MEX3CQ5U5Q3 659 aaKnown RBP22.31■■□□□ 1.16
FAM3A-222ENST00000621967 FRAT1Q92837 279 aaPredicted RBP22.31■■□□□ 1.16
FAM3A-222ENST00000621967 CT47B1P0C2W7 299 aaPredicted RBP22.3■■□□□ 1.16
FAM3A-222ENST00000621967 EIF4A2Q14240 407 aaKnown RBP22.3■■□□□ 1.16
FAM3A-222ENST00000621967 RLBP1P12271 317 aa22.29■■□□□ 1.16
FAM3A-222ENST00000621967 LAS1LQ9Y4W2 734 aaKnown RBP22.29■■□□□ 1.16
FAM3A-222ENST00000621967 U2SURPO15042 1029 aaKnown RBP22.29■■□□□ 1.16
FAM3A-222ENST00000621967 ANKRD24Q8TF21 1146 aa22.29■■□□□ 1.16
FAM3A-222ENST00000621967 CAMTA1Q9Y6Y1 1673 aa22.28■■□□□ 1.16
FAM3A-222ENST00000621967 C8orf37Q96NL8 207 aa22.28■■□□□ 1.16
FAM3A-222ENST00000621967 BTG4Q9NY30 223 aa22.28■■□□□ 1.16
FAM3A-222ENST00000621967 PLCH1Q4KWH8 1693 aa22.28■■□□□ 1.16
FAM3A-222ENST00000621967 ERBB3P21860 1342 aa22.28■■□□□ 1.16
FAM3A-222ENST00000621967 IL13P35225 146 aa22.27■■□□□ 1.16
FAM3A-222ENST00000621967 CSB-PGBD3P0DP91 1061 aa22.27■■□□□ 1.16
FAM3A-222ENST00000621967 COL5A2P05997 1499 aaPredicted RBP22.27■■□□□ 1.15
FAM3A-222ENST00000621967 NGLY1Q96IV0 654 aa22.26■■□□□ 1.15
FAM3A-222ENST00000621967 TMPOP42166 694 aaKnown RBP22.25■■□□□ 1.15
FAM3A-222ENST00000621967 TNNQ9UQP3 1299 aa22.25■■□□□ 1.15
FAM3A-222ENST00000621967 IL16Q14005 1332 aa22.25■■□□□ 1.15
FAM3A-222ENST00000621967 EVA1CP58658 441 aa22.25■■□□□ 1.15
FAM3A-222ENST00000621967 STRN4Q9NRL3 753 aa22.25■■□□□ 1.15
FAM3A-222ENST00000621967 NEFMP07197 916 aa22.24■■□□□ 1.15
FAM3A-222ENST00000621967 TRIM35Q9UPQ4 493 aa22.24■■□□□ 1.15
FAM3A-222ENST00000621967 BCL2L13Q9BXK5 485 aa22.23■■□□□ 1.15
FAM3A-222ENST00000621967 PCDHB15Q9Y5E8 787 aa22.23■■□□□ 1.15
FAM3A-222ENST00000621967 FAM208AQ9UK61 1670 aaKnown RBP22.23■■□□□ 1.15
FAM3A-222ENST00000621967 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
FAM3A-222ENST00000621967 SLIT2O94813 1529 aa22.22■■□□□ 1.15
FAM3A-222ENST00000621967 WDR17Q8IZU2 1322 aa22.22■■□□□ 1.15
FAM3A-222ENST00000621967 RGPD1P0DJD0 1748 aa22.21■■□□□ 1.15
FAM3A-222ENST00000621967 MVPQ14764 893 aaKnown RBP22.21■■□□□ 1.15
FAM3A-222ENST00000621967 EYA1Q99502 592 aa22.21■■□□□ 1.15
FAM3A-222ENST00000621967 NLRP2Q9NX02 1062 aa22.21■■□□□ 1.15
FAM3A-222ENST00000621967 ZKSCAN2Q63HK3 967 aa22.2■■□□□ 1.14
FAM3A-222ENST00000621967 TOM1L2Q6ZVM7 507 aa22.2■■□□□ 1.14
FAM3A-222ENST00000621967 NRAPQ86VF7 1730 aa22.2■■□□□ 1.14
FAM3A-222ENST00000621967 RGPD2P0DJD1 1756 aa22.19■■□□□ 1.14
FAM3A-222ENST00000621967 IGSF1Q8N6C5 1336 aa22.19■■□□□ 1.14
FAM3A-222ENST00000621967 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
FAM3A-222ENST00000621967 TSR2Q969E8 191 aaKnown RBP22.19■■□□□ 1.14
FAM3A-222ENST00000621967 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
FAM3A-222ENST00000621967 HMOX1P09601 288 aa22.18■■□□□ 1.14
FAM3A-222ENST00000621967 SULT6B1Q6IMI4 303 aa22.18■■□□□ 1.14
FAM3A-222ENST00000621967 LARP1Q6PKG0 1096 aaKnown RBP22.18■■□□□ 1.14
FAM3A-222ENST00000621967 FNBP4Q8N3X1 1017 aaPredicted RBP22.18■■□□□ 1.14
FAM3A-222ENST00000621967 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
FAM3A-222ENST00000621967 PNNQ9H307 717 aaKnown RBP22.18■■□□□ 1.14
FAM3A-222ENST00000621967 EXOSC9Q06265 439 aaKnown RBP22.17■■□□□ 1.14
FAM3A-222ENST00000621967 DZIP1LQ8IYY4 767 aaKnown RBP22.17■■□□□ 1.14
FAM3A-222ENST00000621967 DAXXQ9UER7 740 aaPredicted RBP22.17■■□□□ 1.14
FAM3A-222ENST00000621967 CRB1P82279 1406 aa22.16■■□□□ 1.14
FAM3A-222ENST00000621967 SLC4A3P48751 1232 aa22.16■■□□□ 1.14
FAM3A-222ENST00000621967 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
FAM3A-222ENST00000621967 RWDD1Q9H446 243 aaPredicted RBP22.16■■□□□ 1.14
FAM3A-222ENST00000621967 USP21Q9UK80 565 aa22.16■■□□□ 1.14
FAM3A-222ENST00000621967 AFF2P51816 1311 aa22.16■■□□□ 1.14
FAM3A-222ENST00000621967 ILDR1Q86SU0 546 aaPredicted RBP22.16■■□□□ 1.14
FAM3A-222ENST00000621967 AEBP1Q8IUX7 1158 aa22.16■■□□□ 1.14
FAM3A-222ENST00000621967 BCL9LQ86UU0 1499 aa22.15■■□□□ 1.14
FAM3A-222ENST00000621967 FCHSD2O94868 740 aa22.14■■□□□ 1.14
FAM3A-222ENST00000621967 PDZRN3Q9UPQ7 1066 aa22.14■■□□□ 1.14
FAM3A-222ENST00000621967 KDRP35968 1356 aa22.14■■□□□ 1.13
FAM3A-222ENST00000621967 CARD10Q9BWT7 1032 aa22.14■■□□□ 1.13
FAM3A-222ENST00000621967 SMC4Q9NTJ3 1288 aa22.14■■□□□ 1.13
FAM3A-222ENST00000621967 CCDC9Q9Y3X0 531 aaKnown RBP22.14■■□□□ 1.13
FAM3A-222ENST00000621967 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.13■■□□□ 1.13
FAM3A-222ENST00000621967 RIPK4P57078 832 aa22.13■■□□□ 1.13
FAM3A-222ENST00000621967 FTSJ3Q8IY81 847 aaKnown RBP22.13■■□□□ 1.13
FAM3A-222ENST00000621967 SSH1Q8WYL5 1049 aa22.13■■□□□ 1.13
FAM3A-222ENST00000621967 RSPH6AQ9H0K4 717 aa22.13■■□□□ 1.13
FAM3A-222ENST00000621967 DLG5Q8TDM6 1919 aa22.13■■□□□ 1.13
FAM3A-222ENST00000621967 NCAPD2Q15021 1401 aa22.12■■□□□ 1.13
FAM3A-222ENST00000621967 PRKAR2BP31323 418 aa22.12■■□□□ 1.13
FAM3A-222ENST00000621967 TRIM27P14373 513 aa22.12■■□□□ 1.13
FAM3A-222ENST00000621967 SEC24BO95487 1268 aa22.11■■□□□ 1.13
FAM3A-222ENST00000621967 NFKBIBQ15653 356 aa22.1■■□□□ 1.13
FAM3A-222ENST00000621967 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
FAM3A-222ENST00000621967 VPS72Q15906 364 aa22.09■■□□□ 1.13
FAM3A-222ENST00000621967 RAPGEF4Q8WZA2 1011 aa22.09■■□□□ 1.13
FAM3A-222ENST00000621967 DDX19BQ9UMR2 479 aa22.09■■□□□ 1.13
FAM3A-222ENST00000621967 HDAC1Q13547 482 aaPredicted RBP22.08■■□□□ 1.13
FAM3A-222ENST00000621967 SPATA31A1Q5TZJ5 1347 aa22.07■■□□□ 1.12
FAM3A-222ENST00000621967 SPATA31A5Q5VU36 1347 aa22.07■■□□□ 1.12
FAM3A-222ENST00000621967 SPATA31A7Q8IWB4 1347 aa22.07■■□□□ 1.12
FAM3A-222ENST00000621967 KIF16BQ96L93 1317 aa22.07■■□□□ 1.12
FAM3A-222ENST00000621967 ALDH1L2Q3SY69 923 aa22.06■■□□□ 1.12
FAM3A-222ENST00000621967 TRPC5Q9UL62 973 aaPredicted RBP22.06■■□□□ 1.12
FAM3A-222ENST00000621967 MEGF6O75095 1541 aa22.05■■□□□ 1.12
FAM3A-222ENST00000621967 TATP17735 454 aaPredicted RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms