RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 EXOC6BQ9Y2D4 811 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 F6X3S4 739 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 IGSF3O75054 1194 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 FCHSD2O94868 740 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 CBX1P83916 185 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 CHAF1AQ13111 956 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-216ENST00000620854 ESCO1Q5FWF5 840 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 MEIS3Q99687 375 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 USP25Q9UHP3 1055 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 CEP152O94986 1710 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 ANKRD36BQ8N2N9 1353 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 GADD45BO75293 160 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-216ENST00000620854 LRSAM1Q6UWE0 723 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 CHMP3Q9Y3E7 222 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 PLXNC1O60486 1568 aa8.45□□□□□ -1.06
NEDD9-216ENST00000620854 TULP1O00294 542 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-216ENST00000620854 GNAI1P63096 354 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 TMX3Q96JJ7 454 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 NFE2L2Q16236 605 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 POLKQ9UBT6 870 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 CCDC61Q9Y6R9 512 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 TRPM2O94759 1503 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 NUTM2GQ5VZR2 741 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 MCM10Q7L590 875 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 REC8O95072 547 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 MAP4K4O95819 1239 aaPredicted RBP8.44□□□□□ -1.06
NEDD9-216ENST00000620854 KIAA2012Q0VF49 1180 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 DCTPP1Q9H773 170 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 CCDC39Q9UFE4 941 aa8.44□□□□□ -1.06
NEDD9-216ENST00000620854 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
NEDD9-216ENST00000620854 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.44□□□□□ -1.06
NEDD9-216ENST00000620854 API5Q9BZZ5 524 aaKnown RBP8.43□□□□□ -1.06
NEDD9-216ENST00000620854 IL16Q14005 1332 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 ABTB2Q8N961 1025 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 CWC22Q9HCG8 908 aaKnown RBP8.43□□□□□ -1.06
NEDD9-216ENST00000620854 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 NCKAP5LQ9HCH0 1330 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 CFAP74Q9C0B2 1584 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 SPDYE4A6NLX3 237 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 ZNF500O60304 480 aaPredicted RBP8.43□□□□□ -1.06
NEDD9-216ENST00000620854 TSPY26PQ9H489 355 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 PALD1Q9ULE6 856 aa8.43□□□□□ -1.06
NEDD9-216ENST00000620854 ERC2O15083 957 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 SLC4A2P04920 1241 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 SPC24Q8NBT2 197 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 NUDT16Q96DE0 195 aaKnown RBP8.42□□□□□ -1.06
NEDD9-216ENST00000620854 SHPRHQ149N8 1683 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 NME9Q86XW9 330 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 PDLIM2Q96JY6 352 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 ABCC1P33527 1531 aa8.42□□□□□ -1.06
NEDD9-216ENST00000620854 CYP2E1P05181 493 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-216ENST00000620854 HCLS1P14317 486 aaPredicted RBP8.42□□□□□ -1.06
NEDD9-216ENST00000620854 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 AEBP1Q8IUX7 1158 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 DDX54Q8TDD1 881 aaKnown RBP8.41□□□□□ -1.06
NEDD9-216ENST00000620854 ABCA6Q8N139 1617 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 CEP85Q6P2H3 762 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 CHMP4AQ9BY43 222 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 YEATS2Q9ULM3 1422 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 SPHKAPQ2M3C7 1700 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.41□□□□□ -1.06
NEDD9-216ENST00000620854 FIBPO43427 364 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 CLEC17AQ6ZS10 378 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 USP48Q86UV5 1035 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 SBNO2Q9Y2G9 1366 aa8.41□□□□□ -1.06
NEDD9-216ENST00000620854 STK31Q9BXU1 1019 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 IL1RAPL2Q9NP60 686 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 PRDM4Q9UKN5 801 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 DYNC1I1O14576 645 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 EVA1CP58658 441 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 ARHGAP45Q92619 1136 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 PODXL2Q9NZ53 605 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 ZFYVE16Q7Z3T8 1539 aa8.4□□□□□ -1.06
NEDD9-216ENST00000620854 CDK11BP21127 795 aaKnown RBP8.4□□□□□ -1.07
NEDD9-216ENST00000620854 HS1BP3Q53T59 392 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 SULT6B1Q6IMI4 303 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 ANKRD44Q8N8A2 993 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 ZNF428Q96B54 188 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 MAP7D2Q96T17 732 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 IFT57Q9NWB7 429 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 ZNF330Q9Y3S2 320 aaPredicted RBP8.4□□□□□ -1.07
NEDD9-216ENST00000620854 MAP3K4Q9Y6R4 1608 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 RIMS2Q9UQ26 1411 aa8.4□□□□□ -1.07
NEDD9-216ENST00000620854 ADCY5O95622 1261 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 ABCC4O15439 1325 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 NRDCO43847 1150 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 MBD3O95983 291 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 PDE1AP54750 535 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 NOLC1Q14978 699 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEDD9-216ENST00000620854 G2E3Q7L622 706 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 WASLO00401 505 aaPredicted RBP8.39□□□□□ -1.07
NEDD9-216ENST00000620854 CPA1P15085 419 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 GIMAP6Q6P9H5 292 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 CNPY2Q9Y2B0 182 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 MLH3Q9UHC1 1453 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 C1orf141Q5JVX7 400 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 PPP4R3BQ5MIZ7 849 aa8.39□□□□□ -1.07
NEDD9-216ENST00000620854 TSPOAP1O95153 1857 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms