RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 MEGF6O75095 1541 aa33.2■■■□□ 2.91
ATXN3-252ENST00000620536 SYTL4Q96C24 671 aaPredicted RBP33.2■■■□□ 2.91
ATXN3-252ENST00000620536 BTAF1O14981 1849 aa33.19■■■□□ 2.9
ATXN3-252ENST00000620536 HSPA5P11021 654 aaKnown RBP33.19■■■□□ 2.9
ATXN3-252ENST00000620536 PDGFDQ9GZP0 370 aaPredicted RBP33.18■■■□□ 2.9
ATXN3-252ENST00000620536 TATP17735 454 aaPredicted RBP33.17■■■□□ 2.9
ATXN3-252ENST00000620536 EMILIN1Q9Y6C2 1016 aa33.17■■■□□ 2.9
ATXN3-252ENST00000620536 PPM1GO15355 546 aaPredicted RBP33.16■■■□□ 2.9
ATXN3-252ENST00000620536 PRIM1P49642 420 aaKnown RBP33.16■■■□□ 2.9
ATXN3-252ENST00000620536 CASZ1Q86V15 1759 aa33.16■■■□□ 2.9
ATXN3-252ENST00000620536 ZBTB7AO95365 584 aa33.15■■■□□ 2.9
ATXN3-252ENST00000620536 SLC27A3Q5K4L6 730 aa33.11■■■□□ 2.89
ATXN3-252ENST00000620536 KAT6BQ8WYB5 2073 aa33.1■■■□□ 2.89
ATXN3-252ENST00000620536 LRRC4BQ9NT99 713 aa33.1■■■□□ 2.89
ATXN3-252ENST00000620536 ATF5Q9Y2D1 282 aaPredicted RBP33.1■■■□□ 2.89
ATXN3-252ENST00000620536 SHANK3Q9BYB0 1731 aa33.09■■■□□ 2.89
ATXN3-252ENST00000620536 DOT1LQ8TEK3 1739 aa33.08■■■□□ 2.89
ATXN3-252ENST00000620536 PCDH11XQ9BZA7 1347 aa33.07■■■□□ 2.88
ATXN3-252ENST00000620536 PCDH11YQ9BZA8 1340 aa33.07■■■□□ 2.88
ATXN3-252ENST00000620536 PAPPAQ13219 1627 aa33.06■■■□□ 2.88
ATXN3-252ENST00000620536 WASHC2AQ641Q2 1341 aa33.06■■■□□ 2.88
ATXN3-252ENST00000620536 MTFR1LQ9H019 292 aa33.06■■■□□ 2.88
ATXN3-252ENST00000620536 ZNF827Q17R98 1081 aa33.05■■■□□ 2.88
ATXN3-252ENST00000620536 PANK3Q9H999 370 aa33.05■■■□□ 2.88
ATXN3-252ENST00000620536 POLKQ9UBT6 870 aa33.04■■■□□ 2.88
ATXN3-252ENST00000620536 NSD2O96028 1365 aa33.04■■■□□ 2.88
ATXN3-252ENST00000620536 PTGER2P43116 358 aa33.03■■■□□ 2.88
ATXN3-252ENST00000620536 TNNT2P45379 298 aaPredicted RBP33.03■■■□□ 2.88
ATXN3-252ENST00000620536 DCAF8L1A6NGE4 600 aa33.02■■■□□ 2.88
ATXN3-252ENST00000620536 ANKRD26Q9UPS8 1709 aa33.01■■■□□ 2.87
ATXN3-252ENST00000620536 AKT1S1Q96B36 256 aa33■■■□□ 2.87
ATXN3-252ENST00000620536 KCNQ4P56696 695 aa32.99■■■□□ 2.87
ATXN3-252ENST00000620536 MAP2P11137 1827 aaKnown RBP32.98■■■□□ 2.87
ATXN3-252ENST00000620536 EYA1Q99502 592 aa32.97■■■□□ 2.87
ATXN3-252ENST00000620536 CCNL1Q9UK58 526 aaPredicted RBP32.97■■■□□ 2.87
ATXN3-252ENST00000620536 SPG7Q9UQ90 795 aa32.97■■■□□ 2.87
ATXN3-252ENST00000620536 CYP27B1O15528 508 aa32.96■■■□□ 2.87
ATXN3-252ENST00000620536 TFCP2L1Q9NZI6 479 aa32.96■■■□□ 2.87
ATXN3-252ENST00000620536 NCAPD2Q15021 1401 aa32.95■■■□□ 2.87
ATXN3-252ENST00000620536 MPRIPQ6WCQ1 1025 aa32.93■■■□□ 2.86
ATXN3-252ENST00000620536 LY75O60449 1722 aa32.93■■■□□ 2.86
ATXN3-252ENST00000620536 SGIP1Q9BQI5 828 aa32.92■■■□□ 2.86
ATXN3-252ENST00000620536 EIF4A2Q14240 407 aaKnown RBP32.91■■■□□ 2.86
ATXN3-252ENST00000620536 SLC16A10Q8TF71 515 aa32.91■■■□□ 2.86
ATXN3-252ENST00000620536 PKD1L3Q7Z443 1732 aa32.9■■■□□ 2.86
ATXN3-252ENST00000620536 PNPLA7Q6ZV29 1317 aa32.89■■■□□ 2.86
ATXN3-252ENST00000620536 MORC1Q86VD1 984 aa32.89■■■□□ 2.86
ATXN3-252ENST00000620536 ARXQ96QS3 562 aa32.89■■■□□ 2.86
ATXN3-252ENST00000620536 FHDC1Q9C0D6 1143 aaPredicted RBP32.89■■■□□ 2.86
ATXN3-252ENST00000620536 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.89■■■□□ 2.863e-6■■□□□ 13.5
ATXN3-252ENST00000620536 KNSTRNQ9Y448 316 aa32.89■■■□□ 2.86
ATXN3-252ENST00000620536 HMGB2P26583 209 aaKnown RBP32.88■■■□□ 2.85
ATXN3-252ENST00000620536 NKX1-1Q15270 411 aaPredicted RBP32.87■■■□□ 2.85
ATXN3-252ENST00000620536 SYT17Q9BSW7 474 aa32.86■■■□□ 2.85
ATXN3-252ENST00000620536 QSER1Q2KHR3 1735 aa32.85■■■□□ 2.85
ATXN3-252ENST00000620536 PALLDQ8WX93 1383 aa32.85■■■□□ 2.85
ATXN3-252ENST00000620536 SMARCC1Q92922 1105 aaPredicted RBP32.84■■■□□ 2.85
ATXN3-252ENST00000620536 POLD1P28340 1107 aa32.83■■■□□ 2.85
ATXN3-252ENST00000620536 IFNL2Q8IZJ0 200 aa32.83■■■□□ 2.85
ATXN3-252ENST00000620536 MSH5O43196 834 aa32.81■■■□□ 2.84
ATXN3-252ENST00000620536 PIGBQ92521 554 aa32.81■■■□□ 2.84
ATXN3-252ENST00000620536 IGSF1Q8N6C5 1336 aa32.8■■■□□ 2.84
ATXN3-252ENST00000620536 TOGARAM1Q9Y4F4 1720 aa32.8■■■□□ 2.84
ATXN3-252ENST00000620536 PHKG2P15735 406 aa32.8■■■□□ 2.84
ATXN3-252ENST00000620536 YY1P25490 414 aa32.8■■■□□ 2.84
ATXN3-252ENST00000620536 KIF7Q2M1P5 1343 aa32.79■■■□□ 2.84
ATXN3-252ENST00000620536 TMOD3Q9NYL9 352 aa32.78■■■□□ 2.84
ATXN3-252ENST00000620536 PLEKHG2Q9H7P9 1386 aa32.78■■■□□ 2.84
ATXN3-252ENST00000620536 ITGB4P16144 1822 aa32.77■■■□□ 2.84
ATXN3-252ENST00000620536 TUBGCP6Q96RT7 1819 aa32.77■■■□□ 2.84
ATXN3-252ENST00000620536 COL23A1Q86Y22 540 aaPredicted RBP32.75■■■□□ 2.83
ATXN3-252ENST00000620536 C5P01031 1676 aa32.75■■■□□ 2.83
ATXN3-252ENST00000620536 MAP3K5Q99683 1374 aa32.74■■■□□ 2.83
ATXN3-252ENST00000620536 PLEKHO1Q53GL0 409 aaPredicted RBP32.73■■■□□ 2.83
ATXN3-252ENST00000620536 KLHL34Q8N239 644 aa32.73■■■□□ 2.83
ATXN3-252ENST00000620536 AMER1Q5JTC6 1135 aaPredicted RBP32.72■■■□□ 2.83
ATXN3-252ENST00000620536 FLAD1Q8NFF5 587 aa32.72■■■□□ 2.83
ATXN3-252ENST00000620536 AK7Q96M32 723 aa32.7■■■□□ 2.83
ATXN3-252ENST00000620536 HSP90AB1P08238 724 aaKnown RBP32.69■■■□□ 2.82
ATXN3-252ENST00000620536 AMOTQ4VCS5 1084 aa32.69■■■□□ 2.82
ATXN3-252ENST00000620536 LOC102724428A0A0B4J2F2 783 aa32.68■■■□□ 2.82
ATXN3-252ENST00000620536 SIK1P57059 783 aa32.68■■■□□ 2.82
ATXN3-252ENST00000620536 ASAP1Q9ULH1 1129 aa32.68■■■□□ 2.82
ATXN3-252ENST00000620536 COL24A1Q17RW2 1714 aa32.67■■■□□ 2.82
ATXN3-252ENST00000620536 ZNF530Q6P9A1 599 aaPredicted RBP32.66■■■□□ 2.82
ATXN3-252ENST00000620536 DCAF5Q96JK2 942 aa32.66■■■□□ 2.82
ATXN3-252ENST00000620536 TAF1LQ8IZX4 1826 aa32.65■■■□□ 2.82
ATXN3-252ENST00000620536 ERVV-2B6SEH9 535 aa32.65■■■□□ 2.82
ATXN3-252ENST00000620536 AEBP1Q8IUX7 1158 aa32.65■■■□□ 2.82
ATXN3-252ENST00000620536 C4BP0C0L5 1744 aa32.65■■■□□ 2.82
ATXN3-252ENST00000620536 MSL1Q68DK7 614 aa32.64■■■□□ 2.82
ATXN3-252ENST00000620536 SULT6B1Q6IMI4 303 aa32.64■■■□□ 2.82
ATXN3-252ENST00000620536 IL13P35225 146 aa32.63■■■□□ 2.81
ATXN3-252ENST00000620536 ATG3Q9NT62 314 aa32.63■■■□□ 2.81
ATXN3-252ENST00000620536 ATP6V1AP38606 617 aa32.62■■■□□ 2.81
ATXN3-252ENST00000620536 C1orf141Q5JVX7 400 aa32.62■■■□□ 2.81
ATXN3-252ENST00000620536 PER1O15534 1290 aaPredicted RBP32.61■■■□□ 2.81
ATXN3-252ENST00000620536 LINC00116Q8NCU8 138 aa32.61■■■□□ 2.81
ATXN3-252ENST00000620536 PHF14O94880 888 aa32.6■■■□□ 2.81
ATXN3-252ENST00000620536 MTHFSP49914 203 aa32.6■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms