RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 PRAG1Q86YV5 1406 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 HTATSF1O43719 755 aaKnown RBP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 TRIM27P14373 513 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 PLA2G4AP47712 749 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 LRMPQ12912 555 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 TTC31Q49AM3 519 aaPredicted RBP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 TRPM1Q7Z4N2 1603 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 KIF1CO43896 1103 aaKnown RBP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 PNMA6AP0CW24 399 aaPredicted RBP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 TPM4P67936 248 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 ST5P78524 1137 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 TPD52L1Q16890 204 aaPredicted RBP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 HSP90AB3PQ58FF7 597 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 PACS2Q86VP3 889 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.24□□□□□ -0.77
SRSF3-207ENST00000620389 SMARCE1Q969G3 411 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 YEATS2Q9ULM3 1422 aa10.24□□□□□ -0.77
SRSF3-207ENST00000620389 POLR3GO15318 223 aaPredicted RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 SMARCA5O60264 1052 aaPredicted RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 H2AFXP16104 143 aaPredicted RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 MX1P20591 662 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 GPS2Q13227 327 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 ZBTB40Q9NUA8 1239 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 ZNF644Q9H582 1327 aaPredicted RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 SCAF11Q99590 1463 aaKnown RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 GSCP56915 257 aaPredicted RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 NOM1Q5C9Z4 860 aaKnown RBP10.23□□□□□ -0.77
SRSF3-207ENST00000620389 CCDC186Q7Z3E2 898 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 CCDC91Q7Z6B0 441 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 USP48Q86UV5 1035 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 MED4Q9NPJ6 270 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 PLEKHG2Q9H7P9 1386 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 PLB1Q6P1J6 1458 aa10.23□□□□□ -0.77
SRSF3-207ENST00000620389 DNAJC21Q5F1R6 531 aaKnown RBP10.22□□□□□ -0.77
SRSF3-207ENST00000620389 ANKRD45Q5TZF3 282 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 SUFUQ9UMX1 484 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 RRP7AQ9Y3A4 280 aaKnown RBP10.22□□□□□ -0.77
SRSF3-207ENST00000620389 ERBB3P21860 1342 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 E2F4Q16254 413 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 FOXD4L6Q3SYB3 417 aaPredicted RBP10.22□□□□□ -0.77
SRSF3-207ENST00000620389 RNF20Q5VTR2 975 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 FOXD4L3Q6VB84 417 aaPredicted RBP10.22□□□□□ -0.77
SRSF3-207ENST00000620389 MNS1Q8NEH6 495 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 FBXO18Q8NFZ0 1043 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 GOLGA5Q8TBA6 731 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 FUCA2Q9BTY2 467 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
SRSF3-207ENST00000620389 NPHP1O15259 732 aa10.21□□□□□ -0.77
SRSF3-207ENST00000620389 TDO2P48775 406 aa10.21□□□□□ -0.77
SRSF3-207ENST00000620389 CLCN6P51797 869 aa10.21□□□□□ -0.77
SRSF3-207ENST00000620389 WDR63Q8IWG1 891 aa10.21□□□□□ -0.77
SRSF3-207ENST00000620389 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.77
SRSF3-207ENST00000620389 ASXL1Q8IXJ9 1541 aa10.21□□□□□ -0.77
SRSF3-207ENST00000620389 CFAP65Q6ZU64 1925 aaKnown RBP10.21□□□□□ -0.77
SRSF3-207ENST00000620389 SLU7O95391 586 aaKnown RBP10.21□□□□□ -0.78
SRSF3-207ENST00000620389 MAGEA9P43362 315 aa10.21□□□□□ -0.78
SRSF3-207ENST00000620389 PRDM15P57071 1507 aaPredicted RBP10.21□□□□□ -0.78
SRSF3-207ENST00000620389 NBPF20Q3BBV1 942 aa10.21□□□□□ -0.78
SRSF3-207ENST00000620389 CCDC141Q6ZP82 1450 aa10.21□□□□□ -0.78
SRSF3-207ENST00000620389 CFAP44Q96MT7 982 aa10.21□□□□□ -0.78
SRSF3-207ENST00000620389 GOLIM4O00461 696 aa10.2□□□□□ -0.78
SRSF3-207ENST00000620389 SWT1Q5T5J6 900 aaKnown RBP10.2□□□□□ -0.78
SRSF3-207ENST00000620389 ZSCAN25Q6NSZ9 544 aa10.2□□□□□ -0.78
SRSF3-207ENST00000620389 ATF7IPQ6VMQ6 1270 aa10.2□□□□□ -0.78
SRSF3-207ENST00000620389 RNF217Q8TC41 542 aa10.2□□□□□ -0.78
SRSF3-207ENST00000620389 KANK1Q14678 1352 aa10.2□□□□□ -0.78
SRSF3-207ENST00000620389 TMEM57Q8N5G2 664 aa10.2□□□□□ -0.78
SRSF3-207ENST00000620389 SYNMO15061 1565 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 CCDC189A1A4V9 331 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 IRF6O14896 467 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 ERCC6LQ2NKX8 1250 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 GIMAP6Q6P9H5 292 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 FAM43BQ6ZT52 329 aaPredicted RBP10.19□□□□□ -0.78
SRSF3-207ENST00000620389 SUGP1Q8IWZ8 645 aaKnown RBP10.19□□□□□ -0.78
SRSF3-207ENST00000620389 TMX3Q96JJ7 454 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 NRBP1Q9UHY1 535 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 NUP155O75694 1391 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 ZRANB2O95218 330 aaKnown RBP eCLIP10.19□□□□□ -0.78
SRSF3-207ENST00000620389 MCCP23508 829 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 PTPN14Q15678 1187 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 NYAP1Q6ZVC0 841 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 TMEM87AQ8NBN3 555 aa10.19□□□□□ -0.78
SRSF3-207ENST00000620389 ABCC10Q5T3U5 1492 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 EIF4G3O43432 1585 aaKnown RBP10.18□□□□□ -0.78
SRSF3-207ENST00000620389 GSPT1P15170 499 aaKnown RBP10.18□□□□□ -0.78
SRSF3-207ENST00000620389 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 MAP2K1Q02750 393 aaPredicted RBP10.18□□□□□ -0.78
SRSF3-207ENST00000620389 DRC7Q8IY82 874 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 TCP11L2Q8N4U5 519 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 IQUBQ8NA54 791 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 GCC1Q96CN9 775 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 ATP10AO60312 1499 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 CCDC171Q6TFL3 1326 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 MCTP2Q6DN12 878 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 FAM212AQ96EL1 285 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 SGSM3Q96HU1 749 aa10.18□□□□□ -0.78
SRSF3-207ENST00000620389 UBXN6Q9BZV1 441 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms