RNA–Protein interactions for RNA: ENST00000619976.1

SYNRG-227, Transcript of synergin gamma, humanhuman

TSL 2

Gene SYNRG, Length 1,375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-227ENST00000619976 TNNT2P45379 298 aaPredicted RBP38.17■■■■□ 3.7
SYNRG-227ENST00000619976 ZCRB1Q8TBF4 217 aaKnown RBP38.17■■■■□ 3.7
SYNRG-227ENST00000619976 WASHC2AQ641Q2 1341 aa38.16■■■■□ 3.7
SYNRG-227ENST00000619976 NSD2O96028 1365 aa38.16■■■■□ 3.7
SYNRG-227ENST00000619976 RAPGEF4Q8WZA2 1011 aa38.16■■■■□ 3.7
SYNRG-227ENST00000619976 SHANK3Q9BYB0 1731 aa38.15■■■■□ 3.7
SYNRG-227ENST00000619976 PROM2Q8N271 834 aa38.12■■■■□ 3.69
SYNRG-227ENST00000619976 KNSTRNQ9Y448 316 aa38.12■■■■□ 3.69
SYNRG-227ENST00000619976 TATP17735 454 aaPredicted RBP38.11■■■■□ 3.69
SYNRG-227ENST00000619976 LRP5O75197 1615 aa38.11■■■■□ 3.69
SYNRG-227ENST00000619976 BTAF1O14981 1849 aa38.1■■■■□ 3.69
SYNRG-227ENST00000619976 TXNRD1Q16881 649 aa38.07■■■■□ 3.69
SYNRG-227ENST00000619976 MORC1Q86VD1 984 aa38.06■■■■□ 3.68
SYNRG-227ENST00000619976 NCAPD2Q15021 1401 aa38.05■■■■□ 3.68
SYNRG-227ENST00000619976 EYA1Q99502 592 aa38.03■■■■□ 3.68
SYNRG-227ENST00000619976 DOT1LQ8TEK3 1739 aa38.02■■■■□ 3.68
SYNRG-227ENST00000619976 ANO8Q9HCE9 1232 aaPredicted RBP38.02■■■■□ 3.68
SYNRG-227ENST00000619976 AMER1Q5JTC6 1135 aaPredicted RBP38■■■■□ 3.67
SYNRG-227ENST00000619976 PRIM1P49642 420 aaKnown RBP37.99■■■■□ 3.67
SYNRG-227ENST00000619976 EIF4A2Q14240 407 aaKnown RBP37.99■■■■□ 3.67
SYNRG-227ENST00000619976 SYTL4Q96C24 671 aaPredicted RBP37.99■■■■□ 3.67
SYNRG-227ENST00000619976 PCDH11XQ9BZA7 1347 aa37.98■■■■□ 3.67
SYNRG-227ENST00000619976 PCDH11YQ9BZA8 1340 aa37.98■■■■□ 3.67
SYNRG-227ENST00000619976 PKD1L3Q7Z443 1732 aa37.95■■■■□ 3.67
SYNRG-227ENST00000619976 PER1O15534 1290 aaPredicted RBP37.93■■■■□ 3.66
SYNRG-227ENST00000619976 CYP27B1O15528 508 aa37.92■■■■□ 3.66
SYNRG-227ENST00000619976 STK32BQ9NY57 414 aa37.92■■■■□ 3.66
SYNRG-227ENST00000619976 SPG7Q9UQ90 795 aa37.89■■■■□ 3.66
SYNRG-227ENST00000619976 SLC15A2Q16348 729 aa37.88■■■■□ 3.65
SYNRG-227ENST00000619976 IGSF1Q8N6C5 1336 aa37.87■■■■□ 3.65
SYNRG-227ENST00000619976 LRRC4BQ9NT99 713 aa37.86■■■■□ 3.65
SYNRG-227ENST00000619976 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP37.86■■■■□ 3.651e-6■■□□□ 13.8
SYNRG-227ENST00000619976 PAPPAQ13219 1627 aa37.85■■■■□ 3.65
SYNRG-227ENST00000619976 CASZ1Q86V15 1759 aa37.85■■■■□ 3.65
SYNRG-227ENST00000619976 SLC27A3Q5K4L6 730 aa37.83■■■■□ 3.65
SYNRG-227ENST00000619976 CC2D1BQ5T0F9 858 aaKnown RBP37.82■■■■□ 3.65
SYNRG-227ENST00000619976 LY75O60449 1722 aa37.82■■■■□ 3.64
SYNRG-227ENST00000619976 PDGFDQ9GZP0 370 aaPredicted RBP37.81■■■■□ 3.64
SYNRG-227ENST00000619976 SPON1Q9HCB6 807 aa37.81■■■■□ 3.64
SYNRG-227ENST00000619976 TOGARAM1Q9Y4F4 1720 aa37.8■■■■□ 3.64
SYNRG-227ENST00000619976 NKX1-1Q15270 411 aaPredicted RBP37.79■■■■□ 3.64
SYNRG-227ENST00000619976 PLEKHG2Q9H7P9 1386 aa37.78■■■■□ 3.64
SYNRG-227ENST00000619976 ITGB4P16144 1822 aa37.77■■■■□ 3.64
SYNRG-227ENST00000619976 NPC1L1Q9UHC9 1359 aa37.76■■■■□ 3.64
SYNRG-227ENST00000619976 MPRIPQ6WCQ1 1025 aa37.76■■■■□ 3.64
SYNRG-227ENST00000619976 MTHFSP49914 203 aa37.75■■■■□ 3.63
SYNRG-227ENST00000619976 KCNQ4P56696 695 aa37.75■■■■□ 3.63
SYNRG-227ENST00000619976 IFNL2Q8IZJ0 200 aa37.75■■■■□ 3.63
SYNRG-227ENST00000619976 ZNF827Q17R98 1081 aa37.74■■■■□ 3.63
SYNRG-227ENST00000619976 PHKG2P15735 406 aa37.73■■■■□ 3.63
SYNRG-227ENST00000619976 IL13P35225 146 aa37.73■■■■□ 3.63
SYNRG-227ENST00000619976 ZBTB7AO95365 584 aa37.71■■■■□ 3.63
SYNRG-227ENST00000619976 AKT1S1Q96B36 256 aa37.71■■■■□ 3.63
SYNRG-227ENST00000619976 CCNL1Q9UK58 526 aaPredicted RBP37.71■■■■□ 3.63
SYNRG-227ENST00000619976 CNGB1Q14028 1251 aaPredicted RBP37.7■■■■□ 3.63
SYNRG-227ENST00000619976 AEBP1Q8IUX7 1158 aa37.7■■■■□ 3.63
SYNRG-227ENST00000619976 PLEKHO1Q53GL0 409 aaPredicted RBP37.68■■■■□ 3.62
SYNRG-227ENST00000619976 SULT6B1Q6IMI4 303 aa37.68■■■■□ 3.62
SYNRG-227ENST00000619976 PIGBQ92521 554 aa37.68■■■■□ 3.62
SYNRG-227ENST00000619976 PPP1R1BQ9UD71 204 aaPredicted RBP37.67■■■■□ 3.62
SYNRG-227ENST00000619976 PALLDQ8WX93 1383 aa37.66■■■■□ 3.62
SYNRG-227ENST00000619976 KDRP35968 1356 aa37.65■■■■□ 3.62
SYNRG-227ENST00000619976 AMOTQ4VCS5 1084 aa37.65■■■■□ 3.62
SYNRG-227ENST00000619976 QSER1Q2KHR3 1735 aa37.64■■■■□ 3.62
SYNRG-227ENST00000619976 SMARCC1Q92922 1105 aaPredicted RBP37.64■■■■□ 3.62
SYNRG-227ENST00000619976 ATF5Q9Y2D1 282 aaPredicted RBP37.64■■■■□ 3.62
SYNRG-227ENST00000619976 ZNF530Q6P9A1 599 aaPredicted RBP37.62■■■■□ 3.61
SYNRG-227ENST00000619976 MTFR1LQ9H019 292 aa37.62■■■■□ 3.61
SYNRG-227ENST00000619976 TMOD3Q9NYL9 352 aa37.62■■■■□ 3.61
SYNRG-227ENST00000619976 TUBGCP6Q96RT7 1819 aa37.61■■■■□ 3.61
SYNRG-227ENST00000619976 TFCP2L1Q9NZI6 479 aa37.61■■■■□ 3.61
SYNRG-227ENST00000619976 HSP90AB1P08238 724 aaKnown RBP37.59■■■■□ 3.61
SYNRG-227ENST00000619976 PTGER2P43116 358 aa37.59■■■■□ 3.61
SYNRG-227ENST00000619976 DIAPH1O60610 1272 aaKnown RBP37.58■■■■□ 3.61
SYNRG-227ENST00000619976 C5P01031 1676 aa37.58■■■■□ 3.61
SYNRG-227ENST00000619976 PNPLA7Q6ZV29 1317 aa37.57■■■■□ 3.61
SYNRG-227ENST00000619976 TAF1LQ8IZX4 1826 aa37.57■■■■□ 3.6
SYNRG-227ENST00000619976 DCAF5Q96JK2 942 aa37.56■■■■□ 3.6
SYNRG-227ENST00000619976 HMGB2P26583 209 aaKnown RBP37.55■■■■□ 3.6
SYNRG-227ENST00000619976 C1orf141Q5JVX7 400 aa37.55■■■■□ 3.6
SYNRG-227ENST00000619976 ERVV-2B6SEH9 535 aa37.54■■■■□ 3.6
SYNRG-227ENST00000619976 ASAP1Q9ULH1 1129 aa37.54■■■■□ 3.6
SYNRG-227ENST00000619976 HMOX1P09601 288 aa37.53■■■■□ 3.6
SYNRG-227ENST00000619976 KDM6AO15550 1401 aaPredicted RBP37.52■■■■□ 3.6
SYNRG-227ENST00000619976 SLC16A10Q8TF71 515 aa37.52■■■■□ 3.6
SYNRG-227ENST00000619976 COL3A1P02461 1466 aaPredicted RBP37.51■■■■□ 3.6
SYNRG-227ENST00000619976 SGIP1Q9BQI5 828 aa37.51■■■■□ 3.59
SYNRG-227ENST00000619976 LOC102724428A0A0B4J2F2 783 aa37.49■■■■□ 3.59
SYNRG-227ENST00000619976 SIK1P57059 783 aa37.49■■■■□ 3.59
SYNRG-227ENST00000619976 ATG3Q9NT62 314 aa37.48■■■■□ 3.59
SYNRG-227ENST00000619976 C4BP0C0L5 1744 aa37.46■■■■□ 3.59
SYNRG-227ENST00000619976 CABP4P57796 275 aa37.44■■■■□ 3.58
SYNRG-227ENST00000619976 U2SURPO15042 1029 aaKnown RBP37.42■■■■□ 3.58
SYNRG-227ENST00000619976 AKAP4Q5JQC9 854 aa37.42■■■■□ 3.58
SYNRG-227ENST00000619976 COL23A1Q86Y22 540 aaPredicted RBP37.42■■■■□ 3.58
SYNRG-227ENST00000619976 MSH5O43196 834 aa37.42■■■■□ 3.58
SYNRG-227ENST00000619976 SCN11AQ9UI33 1791 aa37.41■■■■□ 3.58
SYNRG-227ENST00000619976 CFAP53Q96M91 514 aa37.41■■■■□ 3.58
SYNRG-227ENST00000619976 COL24A1Q17RW2 1714 aa37.4■■■■□ 3.58
SYNRG-227ENST00000619976 ATP6V1AP38606 617 aa37.4■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms