RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 TRIM6-TRIM34B2RNG4 842 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 KCTD19Q17RG1 926 aaPredicted RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 CNPY2Q9Y2B0 182 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 ZCCHC17Q9NP64 241 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 ZKSCAN1P17029 563 aaPredicted RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 SLC20A2Q08357 652 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 PRDM4Q9UKN5 801 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 AIMP1Q12904 312 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 CLCN1P35523 988 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 UBXN4Q92575 508 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 KIAA0754O94854 1291 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 CKAP2LQ8IYA6 745 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 SNRNP27Q8WVK2 155 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 PRAM1Q96QH2 718 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 ZSCAN12O43309 604 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 DHX16O60231 1041 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 ANKRD18AQ8IVF6 992 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 PIK3R5Q8WYR1 880 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 PRG4Q92954 1404 aaPredicted RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 LRRC2Q9BYS8 371 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 LMOD2Q6P5Q4 547 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 MBIPQ9NS73 344 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.64□□□□□ -1.83
NEB-220ENST00000618972 ZNF521Q96K83 1311 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 A0A0G2JLW4 131 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 STK3Q13188 491 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 LGR6Q9HBX8 967 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 IPO4Q8TEX9 1081 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 PLEKHF1Q96S99 279 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 PA2G4Q9UQ80 394 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 EPC1Q9H2F5 836 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 NDUFB9Q9Y6M9 179 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 SF3A1Q15459 793 aaKnown RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 USHBP1Q8N6Y0 703 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 ZNF710Q8N1W2 664 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 DDX12PQ92771 950 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 PPP4R3BQ5MIZ7 849 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 ST7Q9NRC1 585 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 KIF27Q86VH2 1401 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 TAF7Q15545 349 aaPredicted RBP3.64□□□□□ -1.83
NEB-220ENST00000618972 SWAP70Q9UH65 585 aa3.64□□□□□ -1.83
NEB-220ENST00000618972 ADCY5O95622 1261 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 GORABQ5T7V8 394 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 HSP90AB2PQ58FF8 381 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 KIF15Q9NS87 1388 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 CEBPAP49715 358 aaPredicted RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 PTH1RQ03431 593 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 PTGS1P23219 599 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 FMNL2Q96PY5 1086 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 LIG1P18858 919 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 EFCAB2Q5VUJ9 269 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 CCDC8Q9H0W5 538 aaPredicted RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 SMC5Q8IY18 1101 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 IL25Q9H293 177 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 SURF6O75683 361 aaKnown RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 MKRN1Q9UHC7 482 aaKnown RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 KIF21BO75037 1637 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 GYS2P54840 703 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 ITGB1BP2Q9UKP3 347 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 ZRANB2O95218 330 aaKnown RBP eCLIP3.63□□□□□ -1.83
NEB-220ENST00000618972 GSPT1P15170 499 aaKnown RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 SDF4Q9BRK5 362 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 FILIP1Q7Z7B0 1213 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 SPATS2Q86XZ4 545 aaKnown RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 SMAP1Q8IYB5 467 aaPredicted RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 PSMA5P28066 241 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 TEX2Q8IWB9 1127 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 FEZ2Q9UHY8 353 aaPredicted RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 BRD4O60885 1362 aaPredicted RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 UQCRHLA0A096LP55 91 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 UQCRHP07919 91 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 EFCC1Q9HA90 598 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 CGNQ9P2M7 1197 aaKnown RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 POTEB2H3BUK9 544 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 SPATA24Q86W54 205 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 CPLX2Q6PUV4 134 aaKnown RBP3.63□□□□□ -1.83
NEB-220ENST00000618972 SYNE3Q6ZMZ3 975 aa3.63□□□□□ -1.83
NEB-220ENST00000618972 ANKRD1Q15327 319 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 TPD52L1Q16890 204 aaPredicted RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 CCDC112Q8NEF3 446 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 ZNHIT6Q9NWK9 470 aaKnown RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 ATP2B1P20020 1258 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 LRMPQ12912 555 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 HDAC1Q13547 482 aaPredicted RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 NOLC1Q14978 699 aaKnown RBP eCLIP3.62□□□□□ -1.83
NEB-220ENST00000618972 ODF2Q5BJF6 829 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 CCDC47Q96A33 483 aaKnown RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 HOXA7P31268 230 aaPredicted RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 GPIHBP1Q8IV16 184 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 CFAP57Q96MR6 1250 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 CCDC192P0DO97 292 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 TSPY26PQ9H489 355 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.62□□□□□ -1.83
NEB-220ENST00000618972 NAIPQ13075 1403 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 RBM25P49756 843 aaKnown RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 SRRTQ9BXP5 876 aaKnown RBP3.62□□□□□ -1.83
NEB-220ENST00000618972 GPATCH3Q96I76 525 aa3.62□□□□□ -1.83
NEB-220ENST00000618972 IRX3P78415 501 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms