RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 TTC5Q8N0Z6 440 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 PRKAR2BP31323 418 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 MAGEC2Q9UBF1 373 aaPredicted RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 CC2D2AQ9P2K1 1620 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 PIP4K2AP48426 406 aaPredicted RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 PCMTD1Q96MG8 357 aaPredicted RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 DCTN1Q14203 1278 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 SPC24Q8NBT2 197 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 BBXQ8WY36 941 aaPredicted RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 PTPRKQ15262 1439 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 CCDC27Q2M243 656 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 AMOTL1Q8IY63 956 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 GNL3LQ9NVN8 582 aaKnown RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 PIP4K2BP78356 416 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 IDI1Q13907 227 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 CCDC158Q5M9N0 1113 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 TBC1D9Q6ZT07 1266 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 TXLNBQ8N3L3 684 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 TUBB4AP04350 444 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 SMARCE1Q969G3 411 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 TESK2Q96S53 571 aa3.61□□□□□ -1.83
LPP-221ENST00000618621 NOL10Q9BSC4 688 aaKnown RBP3.61□□□□□ -1.83
LPP-221ENST00000618621 VPS37CA5D8V6 355 aaPredicted RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 KIF2AO00139 706 aaPredicted RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 WASF1Q92558 559 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 NACAP1Q9BZK3 213 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 PRDM16Q9HAZ2 1276 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 TRIM27P14373 513 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 CCDC83Q8IWF9 413 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 PATL2C9JE40 543 aaKnown RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 ATF3P18847 181 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 MAP3K9P80192 1104 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 CAGE1Q8TC20 777 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 SCAND2PQ9GZW5 306 aaPredicted RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 MYO6Q9UM54 1294 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 NFE2L2Q16236 605 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 TWISTNBQ3B726 338 aaPredicted RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 RALYLQ86SE5 291 aaKnown RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 LIMCH1Q9UPQ0 1083 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 TNMDQ9H2S6 317 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 SERPINC1P01008 464 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 IPO4Q8TEX9 1081 aaKnown RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 FAM107BQ9H098 131 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 NCOA2Q15596 1464 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 ERBINQ96RT1 1412 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 CERS3Q8IU89 383 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 THUMPD2Q9BTF0 503 aaKnown RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 FAM177BA6PVY3 158 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 CDKL5O76039 1030 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 ZBTB40Q9NUA8 1239 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 FAM43BQ6ZT52 329 aaPredicted RBP3.6□□□□□ -1.83
LPP-221ENST00000618621 ZSCAN23Q3MJ62 389 aa3.6□□□□□ -1.83
LPP-221ENST00000618621 PLB1Q6P1J6 1458 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 ERLIN2O94905 339 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 CLSTN1O94985 981 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 SPATA32Q96LK8 384 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 STIM1Q13586 685 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 RUFY1Q96T51 708 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 IL16Q14005 1332 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 ME1P48163 572 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 RAB3GAP1Q15042 981 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 MAP3K11Q16584 847 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 UBXN4Q92575 508 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 SPINK5Q9NQ38 1064 aaPredicted RBP3.59□□□□□ -1.83
LPP-221ENST00000618621 EPS15P42566 896 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 ZC3H6P61129 1189 aaKnown RBP3.59□□□□□ -1.83
LPP-221ENST00000618621 PAXBP1Q9Y5B6 917 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 SMARCA5O60264 1052 aaPredicted RBP3.59□□□□□ -1.83
LPP-221ENST00000618621 TUBB4BP68371 445 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 BMP2KLQ5H9B9 411 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 AIMP1Q12904 312 aaKnown RBP3.59□□□□□ -1.83
LPP-221ENST00000618621 RAPGEF4Q8WZA2 1011 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 JAKMIP1Q96N16 626 aaKnown RBP3.59□□□□□ -1.83
LPP-221ENST00000618621 CEP131Q9UPN4 1083 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 DDX54Q8TDD1 881 aaKnown RBP3.59□□□□□ -1.83
LPP-221ENST00000618621 ANTXR1Q9H6X2 564 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 NINLQ9Y2I6 1382 aa3.59□□□□□ -1.83
LPP-221ENST00000618621 TAF7Q15545 349 aaPredicted RBP3.59□□□□□ -1.84
LPP-221ENST00000618621 PTPN14Q15678 1187 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 BICRAQ9NZM4 1560 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 SYCE3A1L190 88 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 GLRX3O76003 335 aaKnown RBP3.59□□□□□ -1.84
LPP-221ENST00000618621 CEP57L1Q8IYX8 460 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 FBLN1P23142 703 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 PRIM1P49642 420 aaKnown RBP3.59□□□□□ -1.84
LPP-221ENST00000618621 GSDMDP57764 484 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 RBM27Q9P2N5 1060 aaKnown RBP3.59□□□□□ -1.84
LPP-221ENST00000618621 LRPPRCP42704 1394 aaKnown RBP3.59□□□□□ -1.84
LPP-221ENST00000618621 UBE2HP62256 183 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 KRT85P78386 507 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 TMCO4Q5TGY1 634 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 SULT6B1Q6IMI4 303 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 AACSQ86V21 672 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 CNPY4Q8N129 248 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 PIAS4Q8N2W9 510 aaPredicted RBP3.59□□□□□ -1.84
LPP-221ENST00000618621 CEP126Q9P2H0 1117 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 RBSNQ9H1K0 784 aa3.59□□□□□ -1.84
LPP-221ENST00000618621 CASQ1P31415 396 aa3.58□□□□□ -1.84
LPP-221ENST00000618621 TRMT2AQ8IZ69 625 aaKnown RBP3.58□□□□□ -1.84
LPP-221ENST00000618621 ANO10Q9NW15 660 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms