RNA–Protein interactions for RNA: ENST00000617999.4

UPK1A-204, Transcript of uroplakin 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPK1A, Length 1,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-204ENST00000617999 TCP11L2Q8N4U5 519 aa20.2■□□□□ 0.82
UPK1A-204ENST00000617999 USP35Q9P2H5 1018 aa20.2■□□□□ 0.82
UPK1A-204ENST00000617999 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
UPK1A-204ENST00000617999 VPS72Q15906 364 aa20.19■□□□□ 0.82
UPK1A-204ENST00000617999 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
UPK1A-204ENST00000617999 SIPA1L3O60292 1781 aaPredicted RBP20.18■□□□□ 0.82
UPK1A-204ENST00000617999 NFE2L2Q16236 605 aa20.17■□□□□ 0.82
UPK1A-204ENST00000617999 ILDR1Q86SU0 546 aaPredicted RBP20.17■□□□□ 0.82
UPK1A-204ENST00000617999 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
UPK1A-204ENST00000617999 IL2RBP14784 551 aa20.16■□□□□ 0.82
UPK1A-204ENST00000617999 TATP17735 454 aaPredicted RBP20.16■□□□□ 0.82
UPK1A-204ENST00000617999 TMPOP42166 694 aaKnown RBP20.16■□□□□ 0.82
UPK1A-204ENST00000617999 MTHFSDQ2M296 383 aaKnown RBP20.16■□□□□ 0.82
UPK1A-204ENST00000617999 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
UPK1A-204ENST00000617999 DOT1LQ8TEK3 1739 aa20.16■□□□□ 0.82
UPK1A-204ENST00000617999 NEFMP07197 916 aa20.15■□□□□ 0.82
UPK1A-204ENST00000617999 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
UPK1A-204ENST00000617999 BRWD3Q6RI45 1802 aa20.15■□□□□ 0.82
UPK1A-204ENST00000617999 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
UPK1A-204ENST00000617999 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
UPK1A-204ENST00000617999 ZNF521Q96K83 1311 aa20.13■□□□□ 0.81
UPK1A-204ENST00000617999 NEUROD2Q15784 382 aa20.13■□□□□ 0.81
UPK1A-204ENST00000617999 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
UPK1A-204ENST00000617999 PHF23Q9BUL5 403 aaPredicted RBP20.13■□□□□ 0.81
UPK1A-204ENST00000617999 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
UPK1A-204ENST00000617999 ZNF530Q6P9A1 599 aaPredicted RBP20.12■□□□□ 0.81
UPK1A-204ENST00000617999 TRPC5Q9UL62 973 aaPredicted RBP20.12■□□□□ 0.81
UPK1A-204ENST00000617999 THRAP3Q9Y2W1 955 aaKnown RBP20.12■□□□□ 0.81
UPK1A-204ENST00000617999 MRC1P22897 1456 aa20.11■□□□□ 0.81
UPK1A-204ENST00000617999 BARGINQ6ZT62 677 aa20.11■□□□□ 0.81
UPK1A-204ENST00000617999 TRIM35Q9UPQ4 493 aa20.11■□□□□ 0.81
UPK1A-204ENST00000617999 RIPK4P57078 832 aa20.1■□□□□ 0.81
UPK1A-204ENST00000617999 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
UPK1A-204ENST00000617999 ITGB4P16144 1822 aa20.1■□□□□ 0.81
UPK1A-204ENST00000617999 KDM3BQ7LBC6 1761 aa20.1■□□□□ 0.81
UPK1A-204ENST00000617999 PCDH11XQ9BZA7 1347 aa20.09■□□□□ 0.81
UPK1A-204ENST00000617999 PCDH11YQ9BZA8 1340 aa20.09■□□□□ 0.81
UPK1A-204ENST00000617999 FAM98CQ17RN3 349 aaKnown RBP20.09■□□□□ 0.81
UPK1A-204ENST00000617999 AMOTQ4VCS5 1084 aa20.09■□□□□ 0.81
UPK1A-204ENST00000617999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.09■□□□□ 0.81
UPK1A-204ENST00000617999 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.81
UPK1A-204ENST00000617999 PAPPAQ13219 1627 aa20.08■□□□□ 0.8
UPK1A-204ENST00000617999 CYP27B1O15528 508 aa20.07■□□□□ 0.8
UPK1A-204ENST00000617999 CCDC27Q2M243 656 aa20.07■□□□□ 0.8
UPK1A-204ENST00000617999 WWC1Q8IX03 1113 aa20.07■□□□□ 0.8
UPK1A-204ENST00000617999 THUMPD2Q9BTF0 503 aaKnown RBP20.07■□□□□ 0.8
UPK1A-204ENST00000617999 SPG7Q9UQ90 795 aa20.07■□□□□ 0.8
UPK1A-204ENST00000617999 PHKG2P15735 406 aa20.06■□□□□ 0.8
UPK1A-204ENST00000617999 DCTN1Q14203 1278 aa20.06■□□□□ 0.8
UPK1A-204ENST00000617999 NCBP3Q53F19 620 aaKnown RBP20.06■□□□□ 0.8
UPK1A-204ENST00000617999 ZNF772Q68DY9 489 aaPredicted RBP20.06■□□□□ 0.8
UPK1A-204ENST00000617999 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
UPK1A-204ENST00000617999 ZCRB1Q8TBF4 217 aaKnown RBP20.06■□□□□ 0.8
UPK1A-204ENST00000617999 CDCA7Q9BWT1 371 aaPredicted RBP20.06■□□□□ 0.8
UPK1A-204ENST00000617999 RGS17Q9UGC6 210 aaPredicted RBP20.06■□□□□ 0.8
UPK1A-204ENST00000617999 CEMIPQ8WUJ3 1361 aa20.06■□□□□ 0.8
UPK1A-204ENST00000617999 LMOD3Q0VAK6 560 aa20.05■□□□□ 0.8
UPK1A-204ENST00000617999 AKAP4Q5JQC9 854 aa20.05■□□□□ 0.8
UPK1A-204ENST00000617999 SBF2Q86WG5 1849 aa20.04■□□□□ 0.8
UPK1A-204ENST00000617999 RGS12O14924 1447 aa20.04■□□□□ 0.8
UPK1A-204ENST00000617999 C1orf141Q5JVX7 400 aa20.04■□□□□ 0.8
UPK1A-204ENST00000617999 MCM10Q7L590 875 aa20.04■□□□□ 0.8
UPK1A-204ENST00000617999 QTRT2Q9H974 415 aaKnown RBP20.04■□□□□ 0.8
UPK1A-204ENST00000617999 GNAT3A8MTJ3 354 aa20.03■□□□□ 0.8
UPK1A-204ENST00000617999 NHSQ6T4R5 1651 aa20.03■□□□□ 0.8
UPK1A-204ENST00000617999 DDB1Q16531 1140 aa20.02■□□□□ 0.8
UPK1A-204ENST00000617999 IFNL2Q8IZJ0 200 aa20.01■□□□□ 0.79
UPK1A-204ENST00000617999 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
UPK1A-204ENST00000617999 UBR2Q8IWV8 1755 aa20■□□□□ 0.79
UPK1A-204ENST00000617999 A0A0G2JS52 829 aa20■□□□□ 0.79
UPK1A-204ENST00000617999 MYT1Q01538 1121 aa20■□□□□ 0.79
UPK1A-204ENST00000617999 MPRIPQ6WCQ1 1025 aa20■□□□□ 0.79
UPK1A-204ENST00000617999 IL17REQ8NFR9 667 aa20■□□□□ 0.79
UPK1A-204ENST00000617999 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
UPK1A-204ENST00000617999 DDX54Q8TDD1 881 aaKnown RBP19.99■□□□□ 0.79
UPK1A-204ENST00000617999 CDCA7LQ96GN5 454 aa19.99■□□□□ 0.79
UPK1A-204ENST00000617999 KAT6BQ8WYB5 2073 aa19.99■□□□□ 0.79
UPK1A-204ENST00000617999 RNMTO43148 476 aaKnown RBP19.98■□□□□ 0.79
UPK1A-204ENST00000617999 POTEAQ6S8J7 498 aa19.98■□□□□ 0.79
UPK1A-204ENST00000617999 RTF1Q92541 710 aaKnown RBP19.98■□□□□ 0.79
UPK1A-204ENST00000617999 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
UPK1A-204ENST00000617999 EXOC5O00471 708 aa19.97■□□□□ 0.79
UPK1A-204ENST00000617999 ONECUT3O60422 494 aaPredicted RBP19.97■□□□□ 0.79
UPK1A-204ENST00000617999 RBM6P78332 1123 aaKnown RBP19.97■□□□□ 0.79
UPK1A-204ENST00000617999 WDR63Q8IWG1 891 aa19.97■□□□□ 0.79
UPK1A-204ENST00000617999 MARCH10Q8NA82 808 aaPredicted RBP19.97■□□□□ 0.79
UPK1A-204ENST00000617999 IL16Q14005 1332 aa19.97■□□□□ 0.79
UPK1A-204ENST00000617999 C5P01031 1676 aa19.97■□□□□ 0.79
UPK1A-204ENST00000617999 GOLGA2Q08379 1002 aa19.96■□□□□ 0.79
UPK1A-204ENST00000617999 NKX1-1Q15270 411 aaPredicted RBP19.96■□□□□ 0.79
UPK1A-204ENST00000617999 SEPT12Q8IYM1 358 aa19.96■□□□□ 0.79
UPK1A-204ENST00000617999 BTAF1O14981 1849 aa19.96■□□□□ 0.79
UPK1A-204ENST00000617999 HSP90AB1P08238 724 aaKnown RBP19.95■□□□□ 0.78
UPK1A-204ENST00000617999 DCAF5Q96JK2 942 aa19.95■□□□□ 0.78
UPK1A-204ENST00000617999 FANCIQ9NVI1 1328 aa19.95■□□□□ 0.78
UPK1A-204ENST00000617999 LAMB4A4D0S4 1761 aa19.94■□□□□ 0.78
UPK1A-204ENST00000617999 SLFN5Q08AF3 891 aa19.93■□□□□ 0.78
UPK1A-204ENST00000617999 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
UPK1A-204ENST00000617999 IFT57Q9NWB7 429 aa19.93■□□□□ 0.78
UPK1A-204ENST00000617999 E9PSI1 815 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms