RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 ANKRD24Q8TF21 1146 aa11.32□□□□□ -0.6
CNTNAP3B-213ENST00000617848 HTATSF1O43719 755 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 MTHFSDQ2M296 383 aaKnown RBP11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 MED1Q15648 1581 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 FANCIQ9NVI1 1328 aa11.31□□□□□ -0.6
CNTNAP3B-213ENST00000617848 ZNF853P0CG23 659 aa11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 EXOSC9Q06265 439 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 CABLES1Q8TDN4 633 aa11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 TSR2Q969E8 191 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 AXIN2Q9Y2T1 843 aa11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 LAS1LQ9Y4W2 734 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 LTBP4Q8N2S1 1624 aa11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 PHRF1Q9P1Y6 1649 aaKnown RBP11.3□□□□□ -0.6
CNTNAP3B-213ENST00000617848 LTN1O94822 1766 aa11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 PLIN1O60240 522 aa11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 RARSP54136 660 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 RTF1Q92541 710 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 LRRC59Q96AG4 307 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 CFAP44Q96MT7 982 aa11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 THUMPD2Q9BTF0 503 aaKnown RBP11.29□□□□□ -0.6
CNTNAP3B-213ENST00000617848 CPDO75976 1380 aa11.28□□□□□ -0.6
CNTNAP3B-213ENST00000617848 FAM83GA6ND36 823 aa11.28□□□□□ -0.6
CNTNAP3B-213ENST00000617848 BCAR3O75815 825 aa11.28□□□□□ -0.6
CNTNAP3B-213ENST00000617848 DCTN1Q14203 1278 aa11.28□□□□□ -0.6
CNTNAP3B-213ENST00000617848 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
CNTNAP3B-213ENST00000617848 GNAT3A8MTJ3 354 aa11.27□□□□□ -0.61
CNTNAP3B-213ENST00000617848 HAP1P54257 671 aaPredicted RBP11.27□□□□□ -0.61
CNTNAP3B-213ENST00000617848 AMOTQ4VCS5 1084 aa11.27□□□□□ -0.61
CNTNAP3B-213ENST00000617848 PLEKHO1Q53GL0 409 aaPredicted RBP11.27□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CHL1O00533 1208 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CHADLQ6NUI6 762 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 MCM10Q7L590 875 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 EXOC6Q8TAG9 804 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 KIAA0232Q92628 1395 aa11.26□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CSB-PGBD3P0DP91 1061 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CHRNA2Q15822 529 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 ALDH1L2Q3SY69 923 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 PELP1Q8IZL8 1130 aaKnown RBP11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CRBNQ96SW2 442 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 NLRP2Q9NX02 1062 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 ERBB3P21860 1342 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 NCAPD2Q15021 1401 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 ABCC6O95255 1503 aa11.25□□□□□ -0.61
CNTNAP3B-213ENST00000617848 TOM1O60784 492 aa11.24□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CANXP27824 592 aaKnown RBP11.24□□□□□ -0.61
CNTNAP3B-213ENST00000617848 PDE3AQ14432 1141 aa11.24□□□□□ -0.61
CNTNAP3B-213ENST00000617848 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CRB1P82279 1406 aa11.24□□□□□ -0.61
CNTNAP3B-213ENST00000617848 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
CNTNAP3B-213ENST00000617848 VAMP4O75379 141 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 MS4A1P11836 297 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 BABAM1Q9NWV8 329 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 MAP3K5Q99683 1374 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 DLG5Q8TDM6 1919 aa11.23□□□□□ -0.61
CNTNAP3B-213ENST00000617848 TATP17735 454 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 COL18A1P39060 1754 aa11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 TAF7Q15545 349 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 ZNF530Q6P9A1 599 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 IL17REQ8NFR9 667 aa11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 SSH1Q8WYL5 1049 aa11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 FRAT1Q92837 279 aaPredicted RBP11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CRYBG1Q9Y4K1 1723 aa11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 BRPF1P55201 1214 aaPredicted RBP11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 TWISTNBQ3B726 338 aaPredicted RBP11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 C1orf141Q5JVX7 400 aa11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 ZKSCAN2Q63HK3 967 aa11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 C8orf58Q8NAV2 365 aa11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 CCDC136Q96JN2 1154 aa11.21□□□□□ -0.61
CNTNAP3B-213ENST00000617848 AHDC1Q5TGY3 1603 aaPredicted RBP11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 PLEKHG2Q9H7P9 1386 aa11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 IPO8O15397 1037 aaKnown RBP11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 TSPYL6Q8N831 410 aa11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 TSPYL4Q9UJ04 414 aa11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
CNTNAP3B-213ENST00000617848 WDR17Q8IZU2 1322 aa11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 ELL2O00472 640 aaPredicted RBP11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 EVA1CP58658 441 aa11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 MIS18AQ9NYP9 233 aa11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 ROBO1Q9Y6N7 1651 aa11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 CAMTA1Q9Y6Y1 1673 aa11.19□□□□□ -0.62
CNTNAP3B-213ENST00000617848 RGPD2P0DJD1 1756 aa11.18□□□□□ -0.62
CNTNAP3B-213ENST00000617848 KIF16BQ96L93 1317 aa11.18□□□□□ -0.62
CNTNAP3B-213ENST00000617848 RNMTO43148 476 aaKnown RBP11.18□□□□□ -0.62
CNTNAP3B-213ENST00000617848 TOM1L2Q6ZVM7 507 aa11.18□□□□□ -0.62
CNTNAP3B-213ENST00000617848 LGR6Q9HBX8 967 aa11.18□□□□□ -0.62
CNTNAP3B-213ENST00000617848 NOB1Q9ULX3 412 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms